Wall clock time and date at job start Tue Mar 9 2021 12:55:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.08992 * 109.47128 * 295.92327 * 3 2 1 5 5 C 1.52998 * 109.47152 * 55.92692 * 3 2 1 6 6 C 1.52996 * 109.47346 * 59.99495 * 5 3 2 7 7 C 1.52999 * 109.46904 * 60.00116 * 6 5 3 8 8 H 1.09005 * 109.47352 * 60.00022 * 7 6 5 9 9 N 1.46506 * 109.47091 * 179.97438 * 7 6 5 10 10 C 1.34773 * 119.99969 * 204.72183 * 9 7 6 11 11 O 1.21617 * 120.00330 * 0.02562 * 10 9 7 12 12 C 1.47386 * 119.99892 * 180.02562 * 10 9 7 13 13 C 1.36414 * 127.18980 * 180.02562 * 12 10 9 14 14 C 1.50702 * 125.80452 * 0.02562 * 13 12 10 15 15 O 1.42898 * 109.47188 * 89.99644 * 14 13 12 16 16 C 1.35905 * 116.99650 * 180.02562 * 15 14 13 17 17 C 1.38733 * 120.05608 * 359.72587 * 16 15 14 18 18 C 1.38141 * 119.94350 * 179.69840 * 17 16 15 19 19 C 1.38268 * 120.05258 * 0.60066 * 18 17 16 20 20 C 1.50706 * 119.94171 * 179.70096 * 19 18 17 21 21 O 1.42901 * 109.46921 * 244.97415 * 20 19 18 22 22 Si 1.86294 * 109.47342 * 4.97504 * 20 19 18 23 23 C 1.38267 * 120.11264 * 359.67462 * 19 18 17 24 24 C 1.38139 * 120.05368 * 0.02562 * 23 19 18 25 25 O 1.33655 * 108.39480 * 179.97438 * 13 12 10 26 26 C 1.34212 * 110.90741 * 0.02562 * 25 13 12 27 27 C 1.34175 * 109.12600 * 359.70590 * 26 25 13 28 28 C 1.52995 * 109.47197 * 299.99753 * 7 6 5 29 29 C 1.52996 * 109.46992 * 60.00301 * 28 7 6 30 30 H 4.18741 * 15.03939 * 359.97438 * 4 2 1 31 31 H 1.09010 * 109.46944 * 299.99504 * 5 3 2 32 32 H 1.08997 * 109.47198 * 179.97438 * 5 3 2 33 33 H 1.08997 * 109.47248 * 300.00307 * 6 5 3 34 34 H 1.09005 * 109.46905 * 179.97438 * 6 5 3 35 35 H 0.97005 * 119.99811 * 25.00235 * 9 7 6 36 36 H 1.09003 * 109.46719 * 209.99780 * 14 13 12 37 37 H 1.08999 * 109.46427 * 329.99495 * 14 13 12 38 38 H 1.08001 * 120.02588 * 359.97438 * 17 16 15 39 39 H 1.07999 * 119.97403 * 180.27525 * 18 17 16 40 40 H 1.08998 * 109.47080 * 124.97685 * 20 19 18 41 41 H 0.96700 * 113.99875 * 60.00016 * 21 20 19 42 42 H 1.48504 * 109.99878 * 58.68197 * 22 20 19 43 43 H 1.48497 * 110.00218 * 179.97438 * 22 20 19 44 44 H 1.07997 * 119.96754 * 180.02562 * 23 19 18 45 45 H 1.08003 * 120.02274 * 180.02562 * 24 23 19 46 46 H 1.08005 * 125.43998 * 179.97438 * 26 25 13 47 47 H 1.08005 * 127.02608 * 180.27158 * 27 26 25 48 48 H 1.09007 * 109.47360 * 179.97438 * 28 7 6 49 49 H 1.08997 * 109.47379 * 300.00069 * 28 7 6 50 50 H 1.09008 * 109.47401 * 180.02562 * 29 28 7 51 51 H 1.09001 * 109.47741 * 59.99690 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0095 -0.4484 0.9242 5 6 3.1563 -0.8073 -1.1948 6 6 2.6460 -0.1769 -2.4922 7 6 3.1553 1.2622 -2.5947 8 1 4.2453 1.2627 -2.5947 9 7 2.6671 1.8656 -3.8372 10 6 3.3405 2.8887 -4.3994 11 8 4.3537 3.3108 -3.8756 12 6 2.8491 3.4961 -5.6492 13 6 3.4106 4.5297 -6.3401 14 6 4.6671 5.2677 -5.9557 15 8 5.7973 4.6250 -6.5486 16 6 7.0176 5.1687 -6.2989 17 6 7.1243 6.3009 -5.5043 18 6 8.3664 6.8480 -5.2468 19 6 9.5014 6.2755 -5.7905 20 6 10.8545 6.8784 -5.5135 21 8 11.4129 7.3752 -6.7315 22 14 10.6737 8.2776 -4.2970 23 6 9.3971 5.1504 -6.5875 24 6 8.1580 4.5959 -6.8428 25 8 2.6576 4.7759 -7.4165 26 6 1.6087 3.9402 -7.4686 27 6 1.6548 3.1108 -6.4149 28 6 2.6449 2.0701 -1.3999 29 6 3.1552 1.4398 -0.1026 30 1 -1.0501 0.0002 0.0007 31 1 2.7935 -1.8326 -1.1218 32 1 4.2463 -0.8064 -1.1951 33 1 1.5560 -0.1774 -2.4921 34 1 3.0100 -0.7523 -3.3434 35 1 1.8570 1.5314 -4.2531 36 1 4.6069 6.2967 -6.3101 37 1 4.7739 5.2626 -4.8709 38 1 6.2375 6.7515 -5.0836 39 1 8.4504 7.7268 -4.6246 40 1 11.5131 6.1168 -5.0961 41 1 10.8785 8.0581 -7.1594 42 1 10.0645 7.7800 -3.0374 43 1 12.0013 8.8803 -4.0150 44 1 10.2853 4.7049 -7.0107 45 1 8.0771 3.7169 -7.4651 46 1 0.8511 3.9334 -8.2382 47 1 0.9558 2.3226 -6.1766 48 1 3.0081 3.0953 -1.4727 49 1 1.5549 2.0696 -1.3999 50 1 2.7912 2.0151 0.7487 51 1 4.2453 1.4403 -0.1025 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_4549634.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:04 Heat of formation + Delta-G solvation = -8.994434 kcal Electronic energy + Delta-G solvation = -34405.864098 eV Core-core repulsion = 29819.248934 eV Total energy + Delta-G solvation = -4586.615164 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.166 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.73634 -41.19500 -41.00925 -39.42804 -39.09045 -37.11060 -35.73227 -34.19398 -33.07249 -32.76644 -31.91884 -31.90330 -31.32005 -30.36223 -27.83261 -26.11401 -25.09459 -23.82005 -23.75664 -23.52971 -22.34798 -22.08678 -21.59768 -20.84490 -19.39516 -19.23253 -18.30786 -18.15675 -17.43546 -17.30299 -17.19597 -16.84471 -16.70759 -16.42080 -16.25484 -15.90165 -15.84304 -15.67120 -15.41506 -15.36147 -15.17364 -14.68722 -14.55756 -14.23051 -14.16173 -14.09822 -13.86583 -13.76566 -13.63029 -13.39404 -13.28865 -13.06052 -12.93226 -12.36278 -12.25630 -12.13636 -11.99768 -11.96058 -11.79462 -11.68111 -11.53359 -11.07144 -10.97854 -10.95238 -10.81220 -10.35191 -10.08245 -9.95692 -9.85180 -9.11938 -4.99448 0.04515 0.38126 0.39688 0.93067 1.35882 1.49770 1.68756 1.92812 1.95497 2.02703 2.11101 2.20612 2.54442 2.75163 3.29483 3.34239 3.54593 3.55043 3.63751 3.71198 3.73383 3.75319 3.84638 3.93070 3.94515 3.97814 4.05620 4.14879 4.16396 4.32294 4.35583 4.38792 4.41652 4.43756 4.52110 4.54132 4.56808 4.61672 4.73716 4.74623 4.78079 4.96133 4.97100 5.02781 5.04309 5.09502 5.11397 5.12060 5.23948 5.24768 5.32533 5.34916 5.49908 5.57691 5.77141 5.85172 6.37230 6.47872 6.64250 6.72914 7.20633 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.174 4.174 3 C 0.016 3.984 4 H 0.095 0.905 5 C -0.107 4.107 6 C -0.128 4.128 7 C 0.148 3.852 8 H 0.092 0.908 9 N -0.718 5.718 10 C 0.590 3.410 11 O -0.533 6.533 12 C -0.210 4.210 13 C 0.064 3.936 14 C 0.136 3.864 15 O -0.304 6.304 16 C 0.143 3.857 17 C -0.202 4.202 18 C -0.073 4.073 19 C -0.159 4.159 20 C -0.062 4.062 21 O -0.541 6.541 22 Si 0.683 3.317 23 C -0.052 4.052 24 C -0.149 4.149 25 O -0.165 6.165 26 C -0.015 4.015 27 C -0.196 4.196 28 C -0.130 4.130 29 C -0.109 4.109 30 H 0.215 0.785 31 H 0.073 0.927 32 H 0.078 0.922 33 H 0.071 0.929 34 H 0.072 0.928 35 H 0.400 0.600 36 H 0.084 0.916 37 H 0.116 0.884 38 H 0.132 0.868 39 H 0.129 0.871 40 H 0.112 0.888 41 H 0.378 0.622 42 H -0.258 1.258 43 H -0.255 1.255 44 H 0.133 0.867 45 H 0.133 0.867 46 H 0.214 0.786 47 H 0.161 0.839 48 H 0.070 0.930 49 H 0.066 0.934 50 H 0.071 0.929 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.590 -0.065 -0.720 5.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.174 4.174 3 C -0.002 4.002 4 H 0.113 0.887 5 C -0.145 4.145 6 C -0.166 4.166 7 C 0.044 3.956 8 H 0.110 0.890 9 N -0.368 5.368 10 C 0.377 3.623 11 O -0.411 6.411 12 C -0.215 4.215 13 C 0.011 3.989 14 C 0.061 3.939 15 O -0.217 6.217 16 C 0.098 3.902 17 C -0.221 4.221 18 C -0.091 4.091 19 C -0.160 4.160 20 C -0.173 4.173 21 O -0.347 6.347 22 Si 0.585 3.415 23 C -0.070 4.070 24 C -0.167 4.167 25 O -0.060 6.060 26 C -0.081 4.081 27 C -0.215 4.215 28 C -0.168 4.168 29 C -0.147 4.147 30 H 0.232 0.768 31 H 0.092 0.908 32 H 0.096 0.904 33 H 0.089 0.911 34 H 0.091 0.909 35 H 0.235 0.765 36 H 0.102 0.898 37 H 0.133 0.867 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.129 0.871 41 H 0.226 0.774 42 H -0.183 1.183 43 H -0.180 1.180 44 H 0.151 0.849 45 H 0.151 0.849 46 H 0.231 0.769 47 H 0.179 0.821 48 H 0.088 0.912 49 H 0.085 0.915 50 H 0.089 0.911 51 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -4.156 0.168 0.275 4.168 hybrid contribution -1.085 -0.935 -0.150 1.440 sum -5.240 -0.768 0.125 5.298 Atomic orbital electron populations 1.24919 0.95940 1.00829 1.01252 1.22906 0.94143 1.00288 1.00018 1.18430 0.84931 0.97079 0.99759 0.88660 1.21506 1.01278 0.99080 0.92637 1.21825 1.01690 0.94523 0.98553 1.21026 1.00109 0.91857 0.82651 0.89043 1.45840 1.29311 1.35321 1.26354 1.17177 0.82971 0.79534 0.82570 1.90796 1.24488 1.61963 1.63870 1.21246 0.99670 1.00789 0.99756 1.21945 0.93602 0.96992 0.86398 1.21104 0.78595 0.94351 0.99814 1.86089 1.12448 1.53483 1.69726 1.18953 0.84545 0.92153 0.94588 1.21181 0.98984 0.98281 1.03612 1.20752 0.91660 0.98667 0.98003 1.20218 0.95266 0.98521 1.01954 1.24962 0.93122 1.04680 0.94566 1.86499 1.50417 1.59751 1.38007 0.94861 0.83513 0.83837 0.79247 1.20819 0.96710 0.94001 0.95434 1.20487 0.89952 1.02407 1.03869 1.83797 1.31875 1.50707 1.39636 1.24056 0.91302 0.91481 1.01296 1.22894 0.99033 1.03295 0.96324 1.21932 1.01298 0.99827 0.93769 1.21528 1.01224 0.94062 0.97839 0.76811 0.90781 0.90365 0.91075 0.90950 0.76543 0.89822 0.86660 0.85009 0.85339 0.87055 0.77433 1.18257 1.18028 0.84923 0.84920 0.76924 0.82136 0.91167 0.91499 0.91054 0.90461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.07 19.25 29.55 0.57 0.49 16 2 C -0.17 -0.13 10.06 -37.12 -0.37 -0.50 16 3 C 0.02 -0.01 3.07 -93.41 -0.29 -0.30 16 4 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 5 C -0.11 0.16 5.43 -26.73 -0.15 0.02 16 6 C -0.13 0.16 5.17 -26.73 -0.14 0.03 16 7 C 0.15 0.02 2.45 -67.93 -0.17 -0.15 16 8 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 9 N -0.72 -0.14 5.08 -54.89 -0.28 -0.42 16 10 C 0.59 1.67 7.77 -12.54 -0.10 1.58 16 11 O -0.53 -3.03 14.51 5.26 0.08 -2.95 16 12 C -0.21 -0.39 6.31 -103.27 -0.65 -1.04 16 13 C 0.06 0.14 7.00 -34.96 -0.24 -0.10 16 14 C 0.14 0.24 4.74 36.01 0.17 0.41 16 15 O -0.30 -1.15 10.12 -19.44 -0.20 -1.35 16 16 C 0.14 0.44 6.69 -39.22 -0.26 0.17 16 17 C -0.20 -0.30 9.04 -39.43 -0.36 -0.65 16 18 C -0.07 -0.06 8.66 -39.61 -0.34 -0.40 16 19 C -0.16 -0.21 5.35 -104.60 -0.56 -0.77 16 20 C -0.06 -0.04 2.80 36.01 0.10 0.06 16 21 O -0.54 -0.53 12.83 -35.23 -0.45 -0.98 16 22 Si 0.68 -0.17 29.80 -169.99 -5.07 -5.24 16 23 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 24 C -0.15 -0.39 9.99 -39.44 -0.39 -0.78 16 25 O -0.17 -0.22 10.52 7.65 0.08 -0.14 16 26 C -0.01 0.02 12.03 29.30 0.35 0.37 16 27 C -0.20 0.19 10.60 -37.46 -0.40 -0.21 16 28 C -0.13 -0.05 5.27 -26.74 -0.14 -0.19 16 29 C -0.11 0.06 5.43 -26.73 -0.15 -0.09 16 30 H 0.22 -0.49 7.80 -54.09 -0.42 -0.91 16 31 H 0.07 -0.12 8.14 -51.92 -0.42 -0.55 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.07 -0.08 7.23 -51.93 -0.38 -0.45 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.40 -0.82 7.77 -40.82 -0.32 -1.14 16 36 H 0.08 -0.05 7.65 -51.93 -0.40 -0.45 16 37 H 0.12 0.24 6.01 -51.93 -0.31 -0.08 16 38 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 39 H 0.13 -0.19 4.90 -52.49 -0.26 -0.44 16 40 H 0.11 0.12 7.96 -51.93 -0.41 -0.29 16 41 H 0.38 -1.09 8.70 45.56 0.40 -0.69 16 42 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 43 H -0.26 -0.75 7.11 56.52 0.40 -0.34 16 44 H 0.13 0.12 8.06 -52.49 -0.42 -0.31 16 45 H 0.13 0.23 8.06 -52.48 -0.42 -0.19 16 46 H 0.21 -1.12 8.06 -52.48 -0.42 -1.55 16 47 H 0.16 -0.62 7.74 -52.48 -0.41 -1.02 16 48 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 49 H 0.07 0.05 7.23 -51.93 -0.38 -0.32 16 50 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 51 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 421.91 15.07 6.36 6.36 Total: 0.00 -9.31 421.91 -10.40 -19.71 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -7.03 Total: -12.46 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -3.89 Total: -2.53 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.28 Total: -0.42 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -0.49 Total: -5.43 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.07 Total: -5.24 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -9.31 -10.40 -19.71 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4549634.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.719 kcal (2) G-P(sol) polarization free energy of solvation -9.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds