Wall clock time and date at job start Tue Mar 9 2021 12:55:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 H 1.09002 * 109.47132 * 82.87190 * 3 2 1 5 5 C 1.53002 * 109.47253 * 202.87213 * 3 2 1 6 6 C 1.52996 * 109.46972 * 59.99852 * 5 3 2 7 7 C 1.53001 * 109.47486 * 60.00463 * 6 5 3 8 8 H 1.08996 * 109.46778 * 59.99584 * 7 6 5 9 9 N 1.46496 * 109.47308 * 180.02562 * 7 6 5 10 10 C 1.34781 * 119.99775 * 205.00143 * 9 7 6 11 11 O 1.21281 * 120.00039 * 359.97438 * 10 9 7 12 12 C 1.50696 * 120.00051 * 180.02562 * 10 9 7 13 13 O 1.42901 * 109.47280 * 179.97438 * 12 10 9 14 14 C 1.35993 * 116.99849 * 179.97438 * 13 12 10 15 15 C 1.39162 * 120.07129 * 179.97438 * 14 13 12 16 16 O 1.35996 * 120.06978 * 0.02562 * 15 14 13 17 17 C 1.42901 * 116.99548 * 180.02562 * 16 15 14 18 18 C 1.38556 * 119.85444 * 180.02562 * 15 14 13 19 19 C 1.38242 * 119.99963 * 0.02562 * 18 15 14 20 20 C 1.50701 * 119.92932 * 180.02562 * 19 18 15 21 21 O 1.42899 * 109.47129 * 64.99204 * 20 19 18 22 22 Si 1.86299 * 109.47384 * 184.99902 * 20 19 18 23 23 C 1.38253 * 120.14880 * 359.97438 * 19 18 15 24 24 C 1.38247 * 120.14173 * 359.77210 * 23 19 18 25 25 C 1.53002 * 109.46637 * 299.99742 * 7 6 5 26 26 C 1.52997 * 109.47306 * 322.87033 * 3 2 1 27 27 H 4.18743 * 15.03955 * 0.02562 * 4 2 1 28 28 H 1.08996 * 109.47407 * 180.02562 * 5 3 2 29 29 H 1.09000 * 109.46986 * 300.00110 * 5 3 2 30 30 H 1.09001 * 109.46993 * 180.02562 * 6 5 3 31 31 H 1.09004 * 109.47298 * 300.00176 * 6 5 3 32 32 H 0.96996 * 120.00066 * 24.99270 * 9 7 6 33 33 H 1.09001 * 109.46822 * 299.99474 * 12 10 9 34 34 H 1.09000 * 109.47296 * 59.99069 * 12 10 9 35 35 H 1.08996 * 109.46681 * 299.99681 * 17 16 15 36 36 H 1.08993 * 109.47335 * 60.00007 * 17 16 15 37 37 H 1.09000 * 109.46986 * 180.02562 * 17 16 15 38 38 H 1.07998 * 120.00328 * 179.97438 * 18 15 14 39 39 H 1.09005 * 109.46897 * 304.99655 * 20 19 18 40 40 H 0.96705 * 113.99730 * 60.01062 * 21 20 19 41 41 H 1.48506 * 109.99793 * 179.97438 * 22 20 19 42 42 H 1.48499 * 109.99732 * 301.31299 * 22 20 19 43 43 H 1.07995 * 119.92877 * 180.02562 * 23 19 18 44 44 H 1.08001 * 119.99358 * 180.27863 * 24 23 19 45 45 H 1.09000 * 109.46986 * 179.97438 * 25 7 6 46 46 H 1.08993 * 109.47662 * 299.99908 * 25 7 6 47 47 H 1.08998 * 109.47533 * 59.99773 * 26 3 2 48 48 H 1.08996 * 109.47853 * 180.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0094 -0.1267 -1.0197 5 6 3.1554 1.3300 0.5607 6 6 2.6453 1.5087 1.9920 7 6 3.1558 0.3589 2.8628 8 1 4.2458 0.3595 2.8627 9 7 2.6669 0.5298 4.2331 10 6 3.3438 -0.0157 5.2630 11 8 4.3574 -0.6485 5.0553 12 6 2.8406 0.1595 6.6726 13 8 3.7222 -0.5057 7.5794 14 6 3.4099 -0.4438 8.9015 15 6 4.2243 -1.0696 9.8405 16 8 5.3345 -1.7441 9.4379 17 6 6.1229 -2.3624 10.4568 18 6 3.9015 -1.0041 11.1863 19 6 2.7723 -0.3185 11.5937 20 6 2.4231 -0.2478 13.0580 21 8 3.4329 0.4860 13.7536 22 14 0.7808 0.6072 13.2642 23 6 1.9632 0.3033 10.6609 24 6 2.2824 0.2461 9.3170 25 6 2.6464 -0.9704 2.3021 26 6 3.1565 -1.1491 0.8707 27 1 -1.0500 0.0005 -0.0001 28 1 4.2454 1.3307 0.5603 29 1 2.7917 2.1492 -0.0596 30 1 3.0079 2.4560 2.3912 31 1 1.5553 1.5082 1.9920 32 1 1.8561 1.0356 4.3992 33 1 2.8027 1.2214 6.9155 34 1 1.8417 -0.2685 6.7577 35 1 6.4782 -1.6023 11.1526 36 1 5.5160 -3.0913 10.9937 37 1 6.9763 -2.8646 10.0012 38 1 4.5316 -1.4893 11.9170 39 1 2.3612 -1.2567 13.4659 40 1 3.5433 1.3950 13.4425 41 1 0.4248 0.6828 14.7040 42 1 0.8426 1.9726 12.6835 43 1 1.0821 0.8382 10.9832 44 1 1.6511 0.7365 8.5908 45 1 3.0104 -1.7896 2.9222 46 1 1.5565 -0.9709 2.3020 47 1 2.7936 -2.0962 0.4714 48 1 4.2465 -1.1485 0.8711 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17761044_60476.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:31 Heat of formation + Delta-G solvation = -58.084579 kcal Electronic energy + Delta-G solvation = -29794.389732 eV Core-core repulsion = 25590.324280 eV Total energy + Delta-G solvation = -4204.065451 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.79479 -41.12058 -39.84948 -39.02809 -38.82170 -36.99772 -35.72404 -33.24728 -32.07603 -31.91339 -31.49280 -30.80981 -28.96748 -28.36924 -26.21738 -24.28988 -23.80621 -23.35167 -22.50691 -21.71818 -21.45020 -19.77215 -18.73459 -18.48601 -18.14181 -17.87555 -17.49028 -17.28055 -17.05073 -16.59691 -16.38454 -16.14446 -15.84322 -15.79153 -15.65976 -15.46357 -15.30246 -15.04925 -14.69398 -14.30307 -14.03442 -13.86225 -13.72362 -13.52408 -13.44842 -13.27812 -12.94205 -12.63637 -12.55270 -12.36231 -12.25875 -12.17850 -12.12587 -11.99608 -11.79477 -11.63643 -11.53908 -11.02133 -10.97527 -10.73374 -10.62530 -10.10090 -9.78257 -8.85185 -4.98770 0.18034 0.30268 1.25471 1.46987 1.55076 1.56257 1.92830 1.93374 1.95643 2.32572 2.55314 2.56872 3.33852 3.34173 3.45423 3.61974 3.66243 3.70385 3.77938 3.81268 3.92290 3.93306 3.95043 4.05279 4.12731 4.14852 4.26428 4.29667 4.34394 4.37959 4.41291 4.46080 4.53047 4.56199 4.57676 4.65744 4.77399 4.95240 4.96097 5.00513 5.03393 5.09745 5.10781 5.12549 5.24317 5.31271 5.37276 5.44524 5.56202 5.97796 6.37386 6.37965 6.55809 6.72871 7.15566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.174 4.174 3 C 0.016 3.984 4 H 0.096 0.904 5 C -0.107 4.107 6 C -0.127 4.127 7 C 0.148 3.852 8 H 0.092 0.908 9 N -0.725 5.725 10 C 0.516 3.484 11 O -0.508 6.508 12 C 0.038 3.962 13 O -0.276 6.276 14 C 0.105 3.895 15 C 0.107 3.893 16 O -0.301 6.301 17 C 0.025 3.975 18 C -0.146 4.146 19 C -0.113 4.113 20 C -0.073 4.073 21 O -0.530 6.530 22 Si 0.688 3.312 23 C -0.115 4.115 24 C -0.170 4.170 25 C -0.131 4.131 26 C -0.109 4.109 27 H 0.215 0.785 28 H 0.078 0.922 29 H 0.074 0.926 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.401 0.599 33 H 0.093 0.907 34 H 0.094 0.906 35 H 0.056 0.944 36 H 0.056 0.944 37 H 0.103 0.897 38 H 0.140 0.860 39 H 0.118 0.882 40 H 0.376 0.624 41 H -0.258 1.258 42 H -0.260 1.260 43 H 0.132 0.868 44 H 0.139 0.861 45 H 0.070 0.930 46 H 0.067 0.933 47 H 0.071 0.929 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.725 2.016 -1.580 5.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.174 4.174 3 C -0.002 4.002 4 H 0.114 0.886 5 C -0.145 4.145 6 C -0.165 4.165 7 C 0.045 3.955 8 H 0.110 0.890 9 N -0.378 5.378 10 C 0.301 3.699 11 O -0.382 6.382 12 C -0.041 4.041 13 O -0.189 6.189 14 C 0.059 3.941 15 C 0.061 3.939 16 O -0.214 6.214 17 C -0.070 4.070 18 C -0.165 4.165 19 C -0.114 4.114 20 C -0.182 4.182 21 O -0.336 6.336 22 Si 0.589 3.411 23 C -0.133 4.133 24 C -0.189 4.189 25 C -0.170 4.170 26 C -0.147 4.147 27 H 0.232 0.768 28 H 0.097 0.903 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.235 0.765 33 H 0.111 0.889 34 H 0.112 0.888 35 H 0.075 0.925 36 H 0.075 0.925 37 H 0.121 0.879 38 H 0.158 0.842 39 H 0.136 0.864 40 H 0.224 0.776 41 H -0.183 1.183 42 H -0.185 1.185 43 H 0.150 0.850 44 H 0.157 0.843 45 H 0.089 0.911 46 H 0.086 0.914 47 H 0.090 0.910 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -4.067 1.530 -1.334 4.546 hybrid contribution 0.093 1.025 0.344 1.085 sum -3.975 2.555 -0.989 4.827 Atomic orbital electron populations 1.24923 0.95938 1.00648 1.01418 1.22907 0.94140 1.00415 0.99908 1.18430 0.84929 0.96174 1.00677 0.88644 1.21506 1.01309 0.96422 0.95291 1.21825 1.01724 0.97829 0.95164 1.21028 1.00150 0.94957 0.79403 0.89026 1.45899 1.29387 1.56278 1.06274 1.20009 0.84335 0.79671 0.85925 1.90793 1.23827 1.38519 1.85028 1.22492 0.94506 0.99015 0.88069 1.86280 1.48781 1.71101 1.12715 1.18290 0.94494 0.98630 0.82646 1.18284 0.88653 0.96038 0.90956 1.86252 1.34466 1.65470 1.35253 1.23130 0.95025 0.97151 0.91719 1.20938 0.99260 1.03047 0.93220 1.19968 0.95918 0.99650 0.95867 1.25008 1.01592 1.02299 0.89350 1.86601 1.56645 1.28858 1.61532 0.94933 0.80907 0.82776 0.82458 1.20734 0.99615 1.00604 0.92297 1.20989 0.97392 1.03227 0.97265 1.21944 1.01328 0.97496 0.96186 1.21529 1.01266 0.97717 0.94176 0.76807 0.90344 0.90774 0.90938 0.91016 0.76501 0.88894 0.88771 0.92541 0.92504 0.87874 0.84208 0.86433 0.77615 1.18263 1.18472 0.85019 0.84335 0.91089 0.91434 0.91003 0.90425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.01 19.25 29.55 0.57 0.56 16 2 C -0.17 -0.08 10.06 -37.13 -0.37 -0.45 16 3 C 0.02 -0.02 3.07 -93.41 -0.29 -0.30 16 4 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 5 C -0.11 0.21 5.43 -26.73 -0.15 0.07 16 6 C -0.13 0.25 5.17 -26.73 -0.14 0.11 16 7 C 0.15 -0.07 2.45 -67.93 -0.17 -0.23 16 8 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 9 N -0.72 0.86 5.08 -53.81 -0.27 0.59 16 10 C 0.52 0.98 7.87 -10.99 -0.09 0.90 16 11 O -0.51 -3.54 16.16 -14.35 -0.23 -3.77 16 12 C 0.04 -0.01 5.22 36.00 0.19 0.17 16 13 O -0.28 -1.13 9.45 -47.34 -0.45 -1.58 16 14 C 0.11 0.30 6.70 -39.12 -0.26 0.03 16 15 C 0.11 0.37 6.70 -39.12 -0.26 0.10 16 16 O -0.30 -1.34 10.28 -34.23 -0.35 -1.70 16 17 C 0.02 0.01 9.81 101.05 0.99 1.00 16 18 C -0.15 -0.23 8.67 -39.46 -0.34 -0.57 16 19 C -0.11 -0.04 5.35 -104.61 -0.56 -0.60 16 20 C -0.07 0.03 2.80 36.01 0.10 0.13 16 21 O -0.53 -0.60 12.83 -35.23 -0.45 -1.05 16 22 Si 0.69 -0.91 29.88 -169.99 -5.08 -5.99 16 23 C -0.11 0.06 8.66 -39.57 -0.34 -0.29 16 24 C -0.17 0.02 9.04 -39.46 -0.36 -0.33 16 25 C -0.13 -0.02 5.27 -26.73 -0.14 -0.16 16 26 C -0.11 0.08 5.43 -26.73 -0.15 -0.07 16 27 H 0.22 -0.55 7.80 -54.09 -0.42 -0.98 16 28 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.07 -0.13 7.23 -51.93 -0.38 -0.51 16 32 H 0.40 -1.72 8.60 -40.82 -0.35 -2.07 16 33 H 0.09 -0.29 7.65 -51.93 -0.40 -0.69 16 34 H 0.09 -0.30 7.68 -51.93 -0.40 -0.70 16 35 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 36 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 37 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.14 0.07 6.30 -52.49 -0.33 -0.26 16 39 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 40 H 0.38 -0.61 8.70 45.56 0.40 -0.21 16 41 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 42 H -0.26 -0.09 7.00 56.52 0.40 0.30 16 43 H 0.13 -0.33 4.83 -52.49 -0.25 -0.58 16 44 H 0.14 -0.45 6.30 -52.49 -0.33 -0.78 16 45 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 46 H 0.07 0.02 7.23 -51.93 -0.38 -0.35 16 47 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 48 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 393.06 15.07 5.92 5.92 Total: 0.00 -10.58 393.06 -9.70 -20.28 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -7.03 Total: -12.77 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -1.76 Total: 0.06 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.27 Total: 0.59 kcal Atomic # 8 Polarization: -6.61 SS G_CDS: -1.48 Total: -8.09 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.08 Total: -5.99 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -10.58 -9.70 -20.28 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_60476.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.809 kcal (2) G-P(sol) polarization free energy of solvation -10.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.388 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.276 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds