Wall clock time and date at job start Tue Mar 9 2021 13:12:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00642 * 6 5 4 8 8 Si 1.86298 * 109.47388 * 165.00260 * 6 5 4 9 9 C 1.37624 * 120.06769 * 179.97438 * 5 4 2 10 10 C 1.39775 * 119.93493 * 0.02562 * 9 5 4 11 11 C 1.47524 * 120.07094 * 180.02562 * 10 9 5 12 12 O 1.21592 * 119.99803 * 359.97438 * 11 10 9 13 13 N 1.34772 * 119.99834 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99738 * 179.97438 * 13 11 10 15 15 C 1.53001 * 109.47003 * 179.97438 * 14 13 11 16 16 H 1.09009 * 112.84972 * 43.80170 * 15 14 13 17 17 C 1.53783 * 113.61493 * 174.99981 * 15 14 13 18 18 C 1.53780 * 87.07890 * 89.11762 * 17 15 14 19 19 H 1.09004 * 113.61531 * 270.88409 * 18 17 15 20 20 S 1.81402 * 113.61425 * 140.06728 * 18 17 15 21 21 C 1.81391 * 101.92242 * 184.99632 * 20 18 17 22 22 O 1.42093 * 108.57647 * 299.48814 * 20 18 17 23 23 O 1.42100 * 108.57690 * 70.50860 * 20 18 17 24 24 C 1.53777 * 113.61476 * 272.49847 * 15 14 13 25 25 C 1.39820 * 119.85821 * 359.97438 * 10 9 5 26 26 C 1.37582 * 119.93048 * 359.70200 * 25 10 9 27 27 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 28 28 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 29 29 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 30 30 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 31 31 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 32 32 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 33 33 H 1.08998 * 109.47004 * 45.00152 * 6 5 4 34 34 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 35 35 H 1.48504 * 109.99992 * 300.00460 * 8 6 5 36 36 H 1.48507 * 109.99852 * 61.32086 * 8 6 5 37 37 H 1.08000 * 120.03350 * 179.97438 * 9 5 4 38 38 H 0.96995 * 120.00134 * 359.97438 * 13 11 10 39 39 H 1.08997 * 109.47199 * 299.99760 * 14 13 11 40 40 H 1.08995 * 109.47203 * 59.99782 * 14 13 11 41 41 H 1.08997 * 113.61252 * 203.66659 * 17 15 14 42 42 H 1.08999 * 113.61458 * 334.56500 * 17 15 14 43 43 H 1.09005 * 109.47376 * 59.99852 * 21 20 18 44 44 H 1.09000 * 109.47239 * 179.97438 * 21 20 18 45 45 H 1.09003 * 109.47230 * 300.00074 * 21 20 18 46 46 H 1.08998 * 113.61581 * 25.42947 * 24 15 14 47 47 H 1.09001 * 113.61522 * 156.33772 * 24 15 14 48 48 H 1.08002 * 120.02916 * 180.02562 * 25 10 9 49 49 H 1.08002 * 119.96336 * 180.29518 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 4.0867 -1.3442 1.0976 8 14 3.8119 -3.9734 0.5502 9 6 3.2735 -2.5530 -1.9156 10 6 2.9599 -2.1702 -3.2228 11 6 3.4876 -2.9401 -4.3652 12 8 4.1965 -3.9085 -4.1702 13 7 3.1847 -2.5694 -5.6251 14 6 3.7092 -3.3337 -6.7596 15 6 3.2188 -2.7075 -8.0666 16 1 3.2880 -1.6196 -8.0670 17 6 3.8128 -3.3630 -9.3246 18 6 2.6235 -4.3370 -9.2829 19 1 2.8101 -5.2286 -8.6842 20 16 1.9383 -4.7177 -10.9188 21 6 0.4991 -5.7369 -10.4943 22 8 1.4793 -3.5097 -11.5096 23 8 2.8719 -5.5240 -11.6241 24 6 1.8526 -3.2398 -8.5301 25 6 2.1441 -1.0567 -3.4453 26 6 1.6476 -0.3451 -2.3776 27 1 -0.3634 -1.0252 0.0708 28 1 -0.3633 0.4513 -0.9233 29 1 -0.3633 0.5740 0.8525 30 1 1.5899 1.9163 0.8525 31 1 3.0829 1.3431 0.0709 32 1 1.7045 1.8723 -0.9233 33 1 2.2160 -2.2181 1.1701 34 1 3.7923 -0.4238 1.1320 35 1 2.8133 -4.9197 -0.0089 36 1 5.0588 -4.0162 -0.2553 37 1 3.9037 -3.4124 -1.7405 38 1 2.6195 -1.7967 -5.7806 39 1 4.7988 -3.3183 -6.7353 40 1 3.3589 -4.3639 -6.6967 41 1 3.8128 -2.7110 -10.1981 42 1 4.7764 -3.8428 -9.1534 43 1 -0.1825 -5.1606 -9.8686 44 1 -0.0140 -6.0393 -11.4072 45 1 0.8287 -6.6231 -9.9518 46 1 1.2337 -3.6203 -7.7175 47 1 1.3167 -2.5542 -9.1865 48 1 1.8997 -0.7588 -4.4543 49 1 1.0135 0.5123 -2.5488 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_13422196.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:06 Heat of formation + Delta-G solvation = -60.700322 kcal Electronic energy + Delta-G solvation = -31353.416962 eV Core-core repulsion = 26990.115322 eV Total energy + Delta-G solvation = -4363.301640 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.86451 -40.99307 -40.01033 -38.02369 -37.74353 -37.32567 -37.07232 -35.69961 -32.96139 -31.63836 -30.75850 -29.42702 -28.83260 -27.17072 -26.96905 -26.39722 -25.09211 -23.33468 -23.00294 -21.39508 -20.62192 -19.89401 -19.06154 -18.64730 -18.07469 -17.87902 -17.45720 -17.28864 -17.05975 -16.58745 -16.54768 -16.32870 -16.17270 -16.01212 -15.65192 -15.22214 -15.09288 -14.89633 -14.73675 -14.44729 -14.30161 -14.19074 -14.11845 -13.94371 -13.78052 -13.71019 -13.49176 -13.27151 -13.21306 -13.15022 -13.05443 -12.92279 -12.89908 -12.77916 -12.12283 -12.04589 -11.95635 -11.89431 -11.35670 -11.27120 -11.09192 -10.89492 -10.33528 -10.21458 -9.91465 -9.81913 -4.75960 -1.10347 -0.50139 0.02645 1.45161 1.58940 1.60277 1.75316 1.87134 2.08285 2.41193 2.52466 2.55661 2.67420 2.99529 3.14947 3.21229 3.28385 3.41007 3.50818 3.58455 3.71504 3.77889 3.80846 3.90525 3.93911 4.00265 4.07741 4.09725 4.09961 4.25930 4.26774 4.29016 4.31120 4.35242 4.48049 4.51765 4.53017 4.56519 4.57271 4.65946 4.68257 4.70030 4.72314 4.89428 4.92280 5.00215 5.10272 5.19211 5.39690 5.52741 6.03193 6.26104 6.64952 7.02251 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.516 5.516 3 C 0.023 3.977 4 C 0.127 3.873 5 C -0.097 4.097 6 C -0.067 4.067 7 O -0.533 6.533 8 Si 0.735 3.265 9 C -0.055 4.055 10 C -0.134 4.134 11 C 0.559 3.441 12 O -0.531 6.531 13 N -0.725 5.725 14 C 0.135 3.865 15 C -0.115 4.115 16 H 0.097 0.903 17 C -0.097 4.097 18 C -0.609 4.609 19 H 0.154 0.846 20 S 2.424 3.576 21 C -0.655 4.655 22 O -0.936 6.936 23 O -0.937 6.937 24 C -0.112 4.112 25 C -0.072 4.072 26 C -0.152 4.152 27 H 0.073 0.927 28 H 0.035 0.965 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.074 0.926 32 H 0.035 0.965 33 H 0.082 0.918 34 H 0.364 0.636 35 H -0.249 1.249 36 H -0.249 1.249 37 H 0.140 0.860 38 H 0.401 0.599 39 H 0.078 0.922 40 H 0.075 0.925 41 H 0.102 0.898 42 H 0.094 0.906 43 H 0.128 0.872 44 H 0.130 0.870 45 H 0.128 0.872 46 H 0.088 0.912 47 H 0.109 0.891 48 H 0.130 0.870 49 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.504 3.719 3.608 7.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.237 5.237 3 C -0.123 4.123 4 C 0.033 3.967 5 C -0.098 4.098 6 C -0.176 4.176 7 O -0.338 6.338 8 Si 0.634 3.366 9 C -0.074 4.074 10 C -0.137 4.137 11 C 0.347 3.653 12 O -0.408 6.408 13 N -0.378 5.378 14 C 0.011 3.989 15 C -0.134 4.134 16 H 0.115 0.885 17 C -0.135 4.135 18 C -0.718 4.718 19 H 0.172 0.828 20 S 2.606 3.394 21 C -0.804 4.804 22 O -0.933 6.933 23 O -0.935 6.935 24 C -0.151 4.151 25 C -0.091 4.091 26 C -0.172 4.172 27 H 0.091 0.909 28 H 0.053 0.947 29 H 0.099 0.901 30 H 0.100 0.900 31 H 0.093 0.907 32 H 0.054 0.946 33 H 0.100 0.900 34 H 0.212 0.788 35 H -0.173 1.173 36 H -0.174 1.174 37 H 0.157 0.843 38 H 0.237 0.763 39 H 0.097 0.903 40 H 0.093 0.907 41 H 0.121 0.879 42 H 0.113 0.887 43 H 0.147 0.853 44 H 0.148 0.852 45 H 0.147 0.853 46 H 0.107 0.893 47 H 0.127 0.873 48 H 0.148 0.852 49 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.980 1.809 2.891 5.241 hybrid contribution -1.786 1.825 -0.982 2.736 sum -5.766 3.634 1.909 7.078 Atomic orbital electron populations 1.22511 0.84907 1.03165 1.01525 1.59459 1.09283 1.14602 1.40343 1.22559 1.01232 0.86828 1.01729 1.18832 0.95001 0.93827 0.89060 1.20288 0.97858 0.95117 0.96528 1.25139 0.97627 1.05071 0.89738 1.86727 1.41433 1.21049 1.84625 0.93291 0.80685 0.73515 0.89117 1.21116 0.96778 0.98545 0.90928 1.19862 1.02232 0.98068 0.93519 1.18148 0.80322 0.84077 0.82782 1.90830 1.37184 1.27483 1.85311 1.45845 1.53407 1.33155 1.05406 1.21212 0.99560 0.95396 0.82704 1.22459 0.96184 1.01116 0.93689 0.88481 1.22596 0.96358 0.95744 0.98842 1.31784 1.09710 1.07617 1.22722 0.82815 1.07790 0.77572 0.76323 0.77690 1.30233 1.21024 1.16284 1.12885 1.93607 1.81418 1.44825 1.73457 1.93617 1.60659 1.69986 1.69197 1.22843 0.96537 0.95359 1.00321 1.21148 0.95190 0.93524 0.99233 1.21607 1.01771 1.01091 0.92780 0.90862 0.94673 0.90144 0.90015 0.90729 0.94598 0.89992 0.78770 1.17344 1.17377 0.84254 0.76284 0.90335 0.90681 0.87927 0.88728 0.85298 0.85165 0.85293 0.89321 0.87267 0.85246 0.85068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.33 60.07 0.56 0.50 16 2 N -0.52 0.68 3.70 -186.86 -0.69 -0.01 16 3 C 0.02 -0.06 9.10 60.06 0.55 0.48 16 4 C 0.13 0.01 4.66 -83.86 -0.39 -0.38 16 5 C -0.10 -0.18 5.28 -104.49 -0.55 -0.73 16 6 C -0.07 -0.08 2.29 36.00 0.08 0.00 16 7 O -0.53 -0.99 12.65 -35.23 -0.45 -1.43 16 8 Si 0.74 0.87 30.40 -169.99 -5.17 -4.30 16 9 C -0.05 -0.17 8.19 -39.23 -0.32 -0.49 16 10 C -0.13 -0.22 5.88 -104.95 -0.62 -0.84 16 11 C 0.56 1.43 7.76 -12.48 -0.10 1.33 16 12 O -0.53 -3.52 16.34 5.28 0.09 -3.44 16 13 N -0.73 0.89 5.51 -61.35 -0.34 0.55 16 14 C 0.13 -0.23 5.35 -4.04 -0.02 -0.25 16 15 C -0.11 0.42 3.94 -89.81 -0.35 0.06 16 16 H 0.10 -0.44 8.14 -51.92 -0.42 -0.86 16 17 C -0.10 0.28 7.26 -25.92 -0.19 0.09 16 18 C -0.61 2.19 3.81 -25.92 -0.10 2.10 16 19 H 0.15 -0.82 7.72 -51.93 -0.40 -1.22 16 20 S 2.42 -3.31 5.30 -107.50 -0.57 -3.88 16 21 C -0.65 2.63 10.62 101.05 1.07 3.71 16 22 O -0.94 -1.88 17.35 -57.83 -1.00 -2.88 16 23 O -0.94 -2.93 18.10 -57.83 -1.05 -3.98 16 24 C -0.11 0.48 7.16 -25.92 -0.19 0.30 16 25 C -0.07 0.08 9.53 -39.23 -0.37 -0.29 16 26 C -0.15 0.17 8.53 -39.45 -0.34 -0.17 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.03 -0.10 7.08 -51.93 -0.37 -0.47 16 29 H 0.08 -0.27 8.12 -51.93 -0.42 -0.69 16 30 H 0.08 -0.30 8.12 -51.93 -0.42 -0.72 16 31 H 0.07 -0.19 7.41 -51.93 -0.38 -0.58 16 32 H 0.04 -0.10 7.33 -51.93 -0.38 -0.48 16 33 H 0.08 0.02 7.77 -51.93 -0.40 -0.39 16 34 H 0.36 -0.06 7.48 45.56 0.34 0.28 16 35 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 36 H -0.25 -1.08 6.81 56.52 0.38 -0.70 16 37 H 0.14 0.65 4.50 -52.49 -0.24 0.41 16 38 H 0.40 -1.63 6.49 -40.82 -0.26 -1.89 16 39 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.07 -0.09 7.38 -51.93 -0.38 -0.48 16 41 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 42 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 43 H 0.13 -0.74 8.14 -51.92 -0.42 -1.16 16 44 H 0.13 -0.51 8.14 -51.92 -0.42 -0.93 16 45 H 0.13 -0.70 8.14 -51.92 -0.42 -1.12 16 46 H 0.09 -0.47 8.10 -51.93 -0.42 -0.89 16 47 H 0.11 -0.48 7.49 -51.93 -0.39 -0.87 16 48 H 0.13 -0.56 6.39 -52.49 -0.34 -0.90 16 49 H 0.13 -0.37 6.99 -52.49 -0.37 -0.74 16 LS Contribution 405.39 15.07 6.11 6.11 Total: 0.00 -13.22 405.39 -11.77 -24.99 By element: Atomic # 1 Polarization: -9.73 SS G_CDS: -7.43 Total: -17.16 kcal Atomic # 6 Polarization: 6.70 SS G_CDS: -1.27 Total: 5.43 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -1.03 Total: 0.54 kcal Atomic # 8 Polarization: -9.32 SS G_CDS: -2.41 Total: -11.73 kcal Atomic # 14 Polarization: 0.87 SS G_CDS: -5.17 Total: -4.30 kcal Atomic # 16 Polarization: -3.31 SS G_CDS: -0.57 Total: -3.88 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -13.22 -11.77 -24.99 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_13422196.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.712 kcal (2) G-P(sol) polarization free energy of solvation -13.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.988 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds