Wall clock time and date at job start Tue Mar 9 2021 13:12:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35990 * 117.00672 * 2 1 4 4 C 1.38559 * 120.06221 * 0.27121 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.27499 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38375 * 120.12922 * 0.27431 * 9 5 4 11 11 Cl 1.73602 * 120.01059 * 179.97438 * 10 9 5 12 12 C 1.38624 * 119.98059 * 0.02562 * 10 9 5 13 13 O 1.36024 * 120.07592 * 180.02562 * 12 10 9 14 14 C 1.42901 * 117.00394 * 89.99793 * 13 12 10 15 15 C 1.52998 * 109.47006 * 269.99624 * 14 13 12 16 16 C 1.50698 * 109.46952 * 149.99825 * 14 13 12 17 17 O 1.21274 * 120.00393 * 5.00195 * 16 14 13 18 18 N 1.34775 * 119.99876 * 184.99987 * 16 14 13 19 19 C 1.46498 * 120.00384 * 179.97438 * 18 16 14 20 20 C 1.53004 * 109.47585 * 179.97438 * 19 18 16 21 21 H 1.09001 * 112.84607 * 314.67220 * 20 19 18 22 22 C 1.53781 * 113.61094 * 85.86297 * 20 19 18 23 23 C 1.54051 * 86.98258 * 89.16270 * 22 20 19 24 24 H 1.08994 * 113.69191 * 270.87079 * 23 22 20 25 25 S 1.81406 * 113.61677 * 139.97647 * 23 22 20 26 26 C 1.81404 * 101.92019 * 82.50803 * 25 23 22 27 27 O 1.42100 * 108.57905 * 196.99023 * 25 23 22 28 28 O 1.42101 * 108.58071 * 328.01893 * 25 23 22 29 29 C 1.53774 * 87.07884 * 25.43083 * 23 22 20 30 30 H 1.08996 * 109.47803 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47289 * 300.00604 * 1 2 3 32 32 H 1.09003 * 109.46668 * 60.00243 * 1 2 3 33 33 H 1.08004 * 119.99245 * 0.02562 * 4 3 2 34 34 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 35 35 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 36 36 H 1.48497 * 110.00028 * 58.68223 * 8 6 5 37 37 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 38 38 H 1.07994 * 119.93853 * 180.29328 * 9 5 4 39 39 H 1.09002 * 109.46926 * 30.00058 * 14 13 12 40 40 H 1.08997 * 109.47329 * 179.97438 * 15 14 13 41 41 H 1.08990 * 109.47224 * 300.00106 * 15 14 13 42 42 H 1.09002 * 109.46693 * 60.00343 * 15 14 13 43 43 H 0.97000 * 120.00115 * 359.97438 * 18 16 14 44 44 H 1.09004 * 109.47343 * 300.00232 * 19 18 16 45 45 H 1.09008 * 109.46763 * 60.00200 * 19 18 16 46 46 H 1.08994 * 113.61767 * 203.66666 * 22 20 19 47 47 H 1.09006 * 113.61750 * 334.57399 * 22 20 19 48 48 H 1.08996 * 109.47316 * 59.99936 * 26 25 23 49 49 H 1.09004 * 109.47216 * 180.02562 * 26 25 23 50 50 H 1.09001 * 109.46928 * 299.99858 * 26 25 23 51 51 H 1.09000 * 113.62015 * 220.02234 * 29 23 22 52 52 H 1.09005 * 113.69163 * 89.12733 * 29 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0057 5 6 1.9221 3.6061 -0.0001 6 6 1.1007 4.8696 -0.0002 7 8 0.2764 4.9017 -1.1670 8 14 2.2349 6.3475 -0.0002 9 6 3.3022 3.6810 0.0000 10 6 4.0606 2.5236 0.0000 11 17 5.7938 2.6212 -0.0006 12 6 3.4359 1.2861 -0.0005 13 8 4.1796 0.1471 0.0001 14 6 4.5333 -0.3962 1.2736 15 6 5.8674 0.1985 1.7290 16 6 4.6625 -1.8935 1.1626 17 8 4.5603 -2.4325 0.0810 18 7 4.8918 -2.6337 2.2653 19 6 5.0169 -4.0893 2.1576 20 6 5.2733 -4.6833 3.5441 21 1 6.0260 -4.1323 4.1080 22 6 3.9885 -4.9630 4.3416 23 6 3.9826 -6.3574 3.6868 24 1 3.4473 -6.3934 2.7380 25 16 3.4999 -7.6899 4.8190 26 6 1.6894 -7.5891 4.7662 27 8 3.9007 -8.9310 4.2547 28 8 3.9342 -7.3508 6.1288 29 6 5.5046 -6.2035 3.5299 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 0.2147 2.3192 0.0105 34 1 0.4718 4.8942 0.8898 35 1 0.7703 4.8824 -1.9982 36 1 3.1196 6.3088 -1.1922 37 1 1.4371 7.6000 -0.0009 38 1 3.7896 4.6446 0.0003 39 1 3.7591 -0.1513 2.0008 40 1 6.1370 -0.2155 2.7005 41 1 6.6414 -0.0465 1.0018 42 1 5.7739 1.2815 1.8093 43 1 4.9740 -2.2026 3.1304 44 1 4.0953 -4.5040 1.7490 45 1 5.8494 -4.3346 1.4980 46 1 4.1410 -4.9879 5.4205 47 1 3.1463 -4.3369 4.0465 48 1 1.3461 -7.7507 3.7444 49 1 1.2638 -8.3522 5.4179 50 1 1.3704 -6.6034 5.1050 51 1 5.8858 -6.5783 2.5800 52 1 6.0721 -6.5668 4.3866 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17836384_13428712.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:09 Heat of formation + Delta-G solvation = -151.479423 kcal Electronic energy + Delta-G solvation = -38527.462644 eV Core-core repulsion = 33228.486261 eV Total energy + Delta-G solvation = -5298.976383 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.114 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -41.99082 -41.14373 -40.12286 -39.30042 -38.99810 -38.01102 -37.79772 -37.05788 -36.99375 -35.58528 -33.27107 -31.54996 -31.35562 -30.44399 -29.16698 -28.57427 -26.84261 -26.79144 -25.77034 -24.57112 -23.68860 -22.76821 -21.65388 -20.48124 -19.75559 -19.61746 -18.86682 -18.47136 -18.42020 -18.25476 -17.57402 -17.15960 -17.12586 -16.89731 -16.84966 -16.53123 -16.27857 -16.13202 -16.06022 -15.88887 -15.72075 -15.48823 -15.07318 -14.78840 -14.43766 -14.30974 -14.13498 -14.10348 -13.95046 -13.91083 -13.78045 -13.61934 -13.59025 -13.28135 -13.24665 -13.20611 -13.06379 -12.79682 -12.71449 -12.71002 -12.64374 -12.40839 -12.00324 -11.97577 -11.84038 -11.69534 -11.62308 -11.56993 -11.34295 -10.99958 -10.73014 -10.70030 -10.17729 -9.83526 -9.43667 -4.93820 -0.92095 -0.34356 -0.03127 0.84313 1.24834 1.48958 1.60358 1.63798 1.83162 1.95298 2.16477 2.20916 2.63042 2.68416 2.90002 3.27926 3.28501 3.41939 3.46442 3.46719 3.61087 3.69063 3.74457 3.82647 3.84496 3.97403 4.00194 4.06915 4.07456 4.15295 4.25207 4.27242 4.30664 4.38989 4.51197 4.59304 4.60111 4.61748 4.67586 4.69182 4.70866 4.75371 4.83732 4.89059 4.93058 4.95131 4.97455 5.08008 5.16026 5.22334 5.23599 5.37424 5.90956 6.31398 6.42016 6.49325 7.15333 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.322 6.322 3 C 0.118 3.882 4 C -0.163 4.163 5 C -0.061 4.061 6 C -0.075 4.075 7 O -0.543 6.543 8 Si 0.756 3.244 9 C -0.132 4.132 10 C -0.018 4.018 11 Cl -0.038 7.038 12 C 0.055 3.945 13 O -0.311 6.311 14 C 0.076 3.924 15 C -0.176 4.176 16 C 0.517 3.483 17 O -0.568 6.568 18 N -0.708 5.708 19 C 0.136 3.864 20 C -0.104 4.104 21 H 0.113 0.887 22 C -0.108 4.108 23 C -0.594 4.594 24 H 0.175 0.825 25 S 2.417 3.583 26 C -0.643 4.643 27 O -0.994 6.994 28 O -0.977 6.977 29 C -0.112 4.112 30 H 0.114 0.886 31 H 0.077 0.923 32 H 0.064 0.936 33 H 0.159 0.841 34 H 0.142 0.858 35 H 0.388 0.612 36 H -0.284 1.284 37 H -0.297 1.297 38 H 0.159 0.841 39 H 0.109 0.891 40 H 0.103 0.897 41 H 0.057 0.943 42 H 0.084 0.916 43 H 0.419 0.581 44 H 0.069 0.931 45 H 0.062 0.938 46 H 0.113 0.887 47 H 0.108 0.892 48 H 0.148 0.852 49 H 0.130 0.870 50 H 0.154 0.846 51 H 0.093 0.907 52 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.089 6.022 5.981 9.421 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.235 6.235 3 C 0.072 3.928 4 C -0.182 4.182 5 C -0.062 4.062 6 C -0.184 4.184 7 O -0.351 6.351 8 Si 0.662 3.338 9 C -0.151 4.151 10 C -0.045 4.045 11 Cl -0.009 7.009 12 C 0.009 3.991 13 O -0.227 6.227 14 C 0.017 3.983 15 C -0.234 4.234 16 C 0.303 3.697 17 O -0.446 6.446 18 N -0.363 5.363 19 C 0.013 3.987 20 C -0.124 4.124 21 H 0.131 0.869 22 C -0.146 4.146 23 C -0.705 4.705 24 H 0.192 0.808 25 S 2.605 3.395 26 C -0.795 4.795 27 O -0.991 6.991 28 O -0.975 6.975 29 C -0.151 4.151 30 H 0.132 0.868 31 H 0.095 0.905 32 H 0.083 0.917 33 H 0.176 0.824 34 H 0.160 0.840 35 H 0.238 0.762 36 H -0.210 1.210 37 H -0.224 1.224 38 H 0.176 0.824 39 H 0.126 0.874 40 H 0.122 0.878 41 H 0.076 0.924 42 H 0.103 0.897 43 H 0.257 0.743 44 H 0.088 0.912 45 H 0.081 0.919 46 H 0.131 0.869 47 H 0.126 0.874 48 H 0.166 0.834 49 H 0.148 0.852 50 H 0.172 0.828 51 H 0.112 0.888 52 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.534 5.418 5.580 8.543 hybrid contribution -0.793 -0.010 -1.461 1.663 sum -4.327 5.408 4.119 8.058 Atomic orbital electron populations 1.23432 0.75936 1.05702 1.02782 1.86208 1.23642 1.25734 1.87924 1.19349 0.90834 0.85986 0.96679 1.21292 1.01602 0.90106 1.05203 1.20140 0.92756 0.95793 0.97521 1.25187 1.00579 1.00651 0.91992 1.86590 1.36279 1.95631 1.16570 0.94142 0.77972 0.73683 0.88041 1.20913 0.92983 0.97364 1.03801 1.20980 0.86175 0.93212 1.04162 1.98394 1.07974 1.98316 1.96210 1.17823 0.87057 0.85639 1.08548 1.86243 1.69885 1.38183 1.28430 1.22331 1.00157 0.90068 0.85736 1.22577 0.94431 1.03473 1.02875 1.20553 0.75841 0.89112 0.84198 1.90740 1.50437 1.74132 1.29245 1.45686 1.73002 1.07519 1.10088 1.21173 1.02110 0.78930 0.96507 1.22340 0.99369 0.95691 0.94977 0.86935 1.22978 0.99727 0.91045 1.00847 1.31736 1.07724 1.14244 1.16808 0.80777 1.07604 0.79841 0.76184 0.75825 1.30108 1.22619 1.13476 1.13312 1.93545 1.82340 1.42964 1.80260 1.93548 1.81374 1.85125 1.37426 1.22715 0.90732 0.96783 1.04903 0.86767 0.90464 0.91737 0.82376 0.84019 0.76250 1.21043 1.22441 0.82379 0.87366 0.87848 0.92401 0.89694 0.74297 0.91223 0.91929 0.86901 0.87382 0.83364 0.85153 0.82774 0.88847 0.88316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.32 -1.26 10.28 -79.57 -0.82 -2.08 16 3 C 0.12 0.34 6.70 22.56 0.15 0.49 16 4 C -0.16 0.29 8.60 22.36 0.19 0.48 16 5 C -0.06 0.20 5.39 -19.86 -0.11 0.09 16 6 C -0.07 0.39 2.82 71.24 0.20 0.59 16 7 O -0.54 1.00 12.77 -148.98 -1.90 -0.91 16 8 Si 0.76 -3.70 29.78 68.60 2.04 -1.66 16 9 C -0.13 0.29 8.45 22.30 0.19 0.48 16 10 C -0.02 -0.03 6.24 22.39 0.14 0.11 16 11 Cl -0.04 -0.06 24.90 -2.72 -0.07 -0.13 16 12 C 0.05 0.27 5.56 22.58 0.13 0.39 16 13 O -0.31 -2.66 8.55 -67.43 -0.58 -3.23 16 14 C 0.08 0.09 3.19 29.85 0.10 0.19 16 15 C -0.18 0.55 8.35 71.98 0.60 1.15 16 16 C 0.52 2.22 7.18 87.66 0.63 2.85 16 17 O -0.57 -8.78 16.51 15.98 0.26 -8.51 16 18 N -0.71 3.23 5.52 -463.05 -2.55 0.68 16 19 C 0.14 -0.59 5.35 86.38 0.46 -0.12 16 20 C -0.10 0.91 3.94 -10.27 -0.04 0.87 16 21 H 0.11 -1.27 8.14 -2.39 -0.02 -1.29 16 22 C -0.11 1.13 7.18 31.21 0.22 1.35 16 23 C -0.59 4.76 3.83 31.21 0.12 4.88 16 24 H 0.17 -2.14 7.70 -2.39 -0.02 -2.16 16 25 S 2.42 -5.42 5.34 -56.49 -0.30 -5.72 16 26 C -0.64 6.17 10.62 113.37 1.20 7.37 16 27 O -0.99 -7.93 18.10 -127.37 -2.30 -10.23 16 28 O -0.98 -4.80 17.19 -127.37 -2.19 -6.99 16 29 C -0.11 0.65 7.26 31.12 0.23 0.88 16 30 H 0.11 -0.78 8.14 -2.39 -0.02 -0.79 16 31 H 0.08 -0.65 7.65 -2.39 -0.02 -0.66 16 32 H 0.06 -0.35 7.68 -2.39 -0.02 -0.37 16 33 H 0.16 -0.78 6.30 -2.91 -0.02 -0.80 16 34 H 0.14 -1.19 7.96 -2.39 -0.02 -1.21 16 35 H 0.39 -2.49 8.70 -74.05 -0.64 -3.14 16 36 H -0.28 0.02 7.11 99.48 0.71 0.73 16 37 H -0.30 -0.81 7.11 99.48 0.71 -0.10 16 38 H 0.16 -0.91 4.86 -2.91 -0.01 -0.93 16 39 H 0.11 -0.38 7.91 -2.39 -0.02 -0.40 16 40 H 0.10 -0.99 7.92 -2.39 -0.02 -1.01 16 41 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 42 H 0.08 -0.28 5.45 -2.39 -0.01 -0.29 16 43 H 0.42 -4.90 8.26 -92.71 -0.77 -5.67 16 44 H 0.07 -0.21 7.38 -2.38 -0.02 -0.23 16 45 H 0.06 -0.05 8.14 -2.38 -0.02 -0.07 16 46 H 0.11 -1.15 7.37 -2.39 -0.02 -1.16 16 47 H 0.11 -1.49 8.10 -2.38 -0.02 -1.51 16 48 H 0.15 -1.94 8.14 -2.39 -0.02 -1.96 16 49 H 0.13 -1.15 8.14 -2.39 -0.02 -1.17 16 50 H 0.15 -2.22 8.14 -2.39 -0.02 -2.24 16 51 H 0.09 -0.53 8.10 -2.39 -0.02 -0.55 16 52 H 0.10 -0.52 8.10 -2.38 -0.02 -0.53 16 Total: 0.00 -39.91 450.04 -3.27 -43.18 By element: Atomic # 1 Polarization: -27.09 SS G_CDS: -0.38 Total: -27.48 kcal Atomic # 6 Polarization: 17.57 SS G_CDS: 5.52 Total: 23.09 kcal Atomic # 7 Polarization: 3.23 SS G_CDS: -2.55 Total: 0.68 kcal Atomic # 8 Polarization: -24.43 SS G_CDS: -7.53 Total: -31.96 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.04 Total: -1.66 kcal Atomic # 16 Polarization: -5.42 SS G_CDS: -0.30 Total: -5.72 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -0.07 Total: -0.13 kcal Total: -39.91 -3.27 -43.18 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_13428712.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.302 kcal (2) G-P(sol) polarization free energy of solvation -39.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.177 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds