Wall clock time and date at job start Tue Mar 9 2021 13:12:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81401 * 1 3 3 O 1.42097 * 108.57823 * 2 1 4 4 O 1.42105 * 108.57923 * 228.97694 * 2 1 3 5 5 C 1.81400 * 101.92028 * 114.49099 * 2 1 3 6 6 H 1.08996 * 112.84816 * 311.19801 * 5 2 1 7 7 C 1.53781 * 113.61538 * 82.50399 * 5 2 1 8 8 C 1.53781 * 87.07978 * 139.97972 * 7 5 2 9 9 H 1.08998 * 113.68702 * 220.00390 * 8 7 5 10 10 C 1.53000 * 113.61434 * 89.11587 * 8 7 5 11 11 N 1.46507 * 109.47072 * 87.50037 * 10 8 7 12 12 C 1.34772 * 120.00026 * 180.02562 * 11 10 8 13 13 O 1.21283 * 119.99809 * 359.97438 * 12 11 10 14 14 C 1.50697 * 120.00255 * 180.02562 * 12 11 10 15 15 C 1.53000 * 109.47300 * 179.97438 * 14 12 11 16 16 O 1.42901 * 109.47055 * 179.97438 * 15 14 12 17 17 C 1.35897 * 117.00083 * 180.02562 * 16 15 14 18 18 C 1.38738 * 120.05494 * 0.31613 * 17 16 15 19 19 C 1.38141 * 119.94395 * 180.25974 * 18 17 16 20 20 C 1.38274 * 120.05552 * 359.44290 * 19 18 17 21 21 C 1.50696 * 119.94301 * 180.27916 * 20 19 18 22 22 O 1.42901 * 109.47185 * 65.00307 * 21 20 19 23 23 Si 1.86301 * 109.46880 * 185.00271 * 21 20 19 24 24 C 1.38260 * 120.11026 * 0.25933 * 20 19 18 25 25 C 1.38149 * 120.05668 * 0.02562 * 24 20 19 26 26 C 1.53774 * 87.08004 * 334.56600 * 8 7 5 27 27 H 1.08999 * 109.47302 * 305.51010 * 1 2 3 28 28 H 1.09007 * 109.46894 * 65.51199 * 1 2 3 29 29 H 1.08999 * 109.47171 * 185.50436 * 1 2 3 30 30 H 1.09003 * 113.61322 * 25.43258 * 7 5 2 31 31 H 1.09004 * 113.60990 * 254.53059 * 7 5 2 32 32 H 1.09001 * 109.47027 * 327.50660 * 10 8 7 33 33 H 1.08994 * 109.47321 * 207.49715 * 10 8 7 34 34 H 0.97003 * 119.99956 * 359.97438 * 11 10 8 35 35 H 1.08999 * 109.47008 * 59.99288 * 14 12 11 36 36 H 1.09000 * 109.47257 * 299.99833 * 14 12 11 37 37 H 1.09001 * 109.47027 * 60.00527 * 15 14 12 38 38 H 1.08994 * 109.46873 * 299.99875 * 15 14 12 39 39 H 1.07998 * 120.02566 * 359.97438 * 18 17 16 40 40 H 1.08002 * 119.97550 * 179.72852 * 19 18 17 41 41 H 1.08998 * 109.47404 * 304.99778 * 21 20 19 42 42 H 0.96696 * 114.00119 * 179.97438 * 22 21 20 43 43 H 1.48503 * 110.00048 * 299.99858 * 23 21 20 44 44 H 1.48497 * 110.00195 * 61.31776 * 23 21 20 45 45 H 1.07997 * 119.97485 * 180.02562 * 24 20 19 46 46 H 1.07997 * 120.02837 * 180.02562 * 25 24 20 47 47 H 1.09006 * 113.61438 * 139.98186 * 26 8 7 48 48 H 1.09001 * 113.61716 * 270.88018 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3469 0.0000 4 8 2.2668 -0.8841 -1.0162 5 6 2.1887 -0.7358 1.6152 6 1 1.6288 -0.2763 2.4297 7 6 2.1361 -2.2727 1.6191 8 6 3.3796 -2.2345 2.5231 9 1 4.1165 -3.0021 2.2868 10 6 3.0503 -2.1666 4.0157 11 7 2.8835 -3.5239 4.5413 12 6 2.5869 -3.7109 5.8426 13 8 2.4585 -2.7555 6.5787 14 6 2.4159 -5.1071 6.3835 15 6 2.0866 -5.0391 7.8760 16 8 1.9238 -6.3630 8.3887 17 6 1.6253 -6.4809 9.7092 18 6 1.4853 -5.3455 10.4940 19 6 1.1872 -5.4682 11.8373 20 6 1.0169 -6.7209 12.3973 21 6 0.6855 -6.8516 13.8615 22 8 -0.6015 -6.2830 14.1112 23 14 0.6714 -8.6530 14.3366 24 6 1.1498 -7.8538 11.6159 25 6 1.4537 -7.7367 10.2734 26 6 3.6946 -0.8650 1.8988 27 1 -0.3634 0.5969 0.8365 28 1 -0.3633 0.4260 -0.9353 29 1 -0.3633 -1.0229 0.0986 30 1 2.3204 -2.7184 0.6416 31 1 1.2514 -2.6780 2.1103 32 1 2.1268 -1.6055 4.1589 33 1 3.8633 -1.6695 4.5449 34 1 2.9859 -4.2880 3.9525 35 1 3.3397 -5.6677 6.2407 36 1 1.6034 -5.6048 5.8541 37 1 1.1628 -4.4784 8.0191 38 1 2.8993 -4.5416 8.4051 39 1 1.6139 -4.3667 10.0562 40 1 1.0824 -4.5847 12.4497 41 1 1.4358 -6.3260 14.4522 42 1 -0.8807 -6.3324 15.0357 43 1 -0.3475 -9.3808 13.5383 44 1 2.0131 -9.2482 14.1116 45 1 1.0160 -8.8312 12.0555 46 1 1.5570 -8.6219 9.6634 47 1 4.0681 -0.1338 2.6157 48 1 4.3050 -0.9258 0.9978 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:50 Heat of formation + Delta-G solvation = -115.581810 kcal Electronic energy + Delta-G solvation = -29777.938358 eV Core-core repulsion = 25314.538216 eV Total energy + Delta-G solvation = -4463.400142 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -41.47743 -41.10083 -40.16791 -39.05415 -38.02986 -37.23669 -37.07663 -35.65552 -33.50613 -32.11273 -31.59694 -30.76232 -29.50734 -27.17934 -26.62669 -25.85812 -24.90779 -23.45047 -22.06605 -21.66750 -20.59999 -19.86111 -19.48984 -18.65236 -18.38553 -17.90062 -17.58393 -17.37738 -17.28002 -17.03725 -16.84743 -16.68503 -16.34447 -16.13469 -15.93134 -15.29595 -15.20878 -14.83947 -14.68088 -14.45387 -14.32714 -14.27492 -14.21391 -13.99991 -13.94432 -13.87212 -13.71897 -13.47767 -13.23544 -13.08238 -13.02385 -12.90051 -12.84149 -12.27087 -12.12861 -11.97405 -11.96331 -11.90145 -11.81724 -11.75929 -11.28819 -11.04305 -10.31983 -10.29692 -10.03261 -9.17417 -4.97250 -1.10993 0.26523 0.36049 1.29275 1.41936 1.56717 1.60833 1.64249 1.97326 2.33382 2.41529 2.64547 2.65979 2.98584 3.15546 3.22468 3.29084 3.43796 3.44020 3.70800 3.72924 3.75112 3.78685 3.80522 3.90193 3.93009 3.94654 4.08575 4.20376 4.24234 4.26452 4.27823 4.29132 4.45302 4.48287 4.52141 4.52681 4.57073 4.58984 4.61179 4.66097 4.66826 4.91194 4.97914 5.17216 5.18019 5.32980 5.50948 5.67676 6.20572 6.34057 6.63752 6.97225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.655 4.655 2 S 2.422 3.578 3 O -0.937 6.937 4 O -0.935 6.935 5 C -0.610 4.610 6 H 0.153 0.847 7 C -0.112 4.112 8 C -0.115 4.115 9 H 0.098 0.902 10 C 0.134 3.866 11 N -0.728 5.728 12 C 0.520 3.480 13 O -0.537 6.537 14 C -0.141 4.141 15 C 0.074 3.926 16 O -0.316 6.316 17 C 0.137 3.863 18 C -0.204 4.204 19 C -0.048 4.048 20 C -0.114 4.114 21 C -0.067 4.067 22 O -0.547 6.547 23 Si 0.681 3.319 24 C -0.084 4.084 25 C -0.145 4.145 26 C -0.097 4.097 27 H 0.128 0.872 28 H 0.130 0.870 29 H 0.129 0.871 30 H 0.110 0.890 31 H 0.088 0.912 32 H 0.074 0.926 33 H 0.077 0.923 34 H 0.405 0.595 35 H 0.108 0.892 36 H 0.108 0.892 37 H 0.073 0.927 38 H 0.073 0.927 39 H 0.135 0.865 40 H 0.131 0.869 41 H 0.073 0.927 42 H 0.381 0.619 43 H -0.251 1.251 44 H -0.255 1.255 45 H 0.124 0.876 46 H 0.135 0.865 47 H 0.094 0.906 48 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.065 -3.147 2.376 4.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.605 3.395 3 O -0.934 6.934 4 O -0.932 6.932 5 C -0.719 4.719 6 H 0.171 0.829 7 C -0.150 4.150 8 C -0.135 4.135 9 H 0.116 0.884 10 C 0.011 3.989 11 N -0.381 5.381 12 C 0.306 3.694 13 O -0.414 6.414 14 C -0.181 4.181 15 C -0.002 4.002 16 O -0.230 6.230 17 C 0.092 3.908 18 C -0.223 4.223 19 C -0.066 4.066 20 C -0.114 4.114 21 C -0.177 4.177 22 O -0.353 6.353 23 Si 0.582 3.418 24 C -0.102 4.102 25 C -0.163 4.163 26 C -0.135 4.135 27 H 0.147 0.853 28 H 0.148 0.852 29 H 0.147 0.853 30 H 0.129 0.871 31 H 0.107 0.893 32 H 0.092 0.908 33 H 0.095 0.905 34 H 0.240 0.760 35 H 0.126 0.874 36 H 0.126 0.874 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.153 0.847 40 H 0.149 0.851 41 H 0.091 0.909 42 H 0.229 0.771 43 H -0.175 1.175 44 H -0.180 1.180 45 H 0.142 0.858 46 H 0.153 0.847 47 H 0.113 0.887 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -0.417 -2.985 1.168 3.233 hybrid contribution -0.480 0.139 -0.047 0.502 sum -0.897 -2.846 1.121 3.188 Atomic orbital electron populations 1.30239 1.26611 1.11644 1.11951 1.07834 0.78506 0.75662 0.77541 1.93617 1.79085 1.34288 1.86458 1.93611 1.79207 1.67152 1.53278 1.31779 1.07715 1.08852 1.23509 0.82886 1.22852 0.99819 0.89943 1.02405 1.22464 0.98531 0.98905 0.93580 0.88415 1.21195 1.02493 0.83566 0.91651 1.45917 1.72626 1.09456 1.10094 1.20292 0.76166 0.90937 0.81964 1.90768 1.49982 1.43212 1.57415 1.21462 1.05829 0.95132 0.95684 1.22427 1.02639 0.82135 0.93004 1.85963 1.85062 1.30210 1.21719 1.18928 0.95169 0.94077 0.82632 1.21386 1.07576 0.98161 0.95179 1.20815 0.94750 0.97079 0.93973 1.19247 1.04339 0.93580 0.94229 1.24615 0.87735 1.10533 0.94845 1.86500 1.33038 1.83330 1.32426 0.95381 0.81358 0.74988 0.90055 1.20689 0.98745 0.97485 0.93231 1.20308 1.05610 0.95686 0.94738 1.22587 0.90485 0.97780 1.02687 0.85298 0.85154 0.85258 0.87122 0.89323 0.90810 0.90482 0.76039 0.87356 0.87390 0.90867 0.90836 0.84748 0.85130 0.90943 0.77120 1.17547 1.17952 0.85843 0.84683 0.88748 0.88056 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 2.73 10.62 101.05 1.07 3.80 16 2 S 2.42 -3.68 5.34 -107.50 -0.57 -4.26 16 3 O -0.94 -2.74 18.10 -57.83 -1.05 -3.79 16 4 O -0.94 -1.76 17.19 -57.83 -0.99 -2.76 16 5 C -0.61 2.40 3.82 -25.92 -0.10 2.30 16 6 H 0.15 -0.89 7.72 -51.93 -0.40 -1.29 16 7 C -0.11 0.51 7.16 -25.92 -0.19 0.33 16 8 C -0.12 0.48 3.94 -89.81 -0.35 0.13 16 9 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 10 C 0.13 -0.37 5.35 -4.04 -0.02 -0.39 16 11 N -0.73 2.25 5.56 -60.29 -0.33 1.92 16 12 C 0.52 -0.24 7.83 -10.99 -0.09 -0.33 16 13 O -0.54 -2.00 15.98 5.55 0.09 -1.91 16 14 C -0.14 0.32 6.07 -27.88 -0.17 0.15 16 15 C 0.07 0.02 4.03 37.16 0.15 0.17 16 16 O -0.32 -0.64 10.14 -19.42 -0.20 -0.84 16 17 C 0.14 0.41 6.69 -39.21 -0.26 0.15 16 18 C -0.20 -0.52 9.04 -39.43 -0.36 -0.88 16 19 C -0.05 -0.13 9.68 -39.60 -0.38 -0.51 16 20 C -0.11 -0.33 5.38 -104.60 -0.56 -0.90 16 21 C -0.07 -0.03 2.79 36.00 0.10 0.07 16 22 O -0.55 -0.38 12.81 -35.23 -0.45 -0.84 16 23 Si 0.68 -0.49 29.85 -169.99 -5.07 -5.56 16 24 C -0.08 -0.25 8.66 -39.61 -0.34 -0.60 16 25 C -0.14 -0.41 9.99 -39.43 -0.39 -0.80 16 26 C -0.10 0.31 7.26 -25.92 -0.19 0.13 16 27 H 0.13 -0.72 8.14 -51.92 -0.42 -1.15 16 28 H 0.13 -0.52 8.14 -51.92 -0.42 -0.94 16 29 H 0.13 -0.76 8.14 -51.92 -0.42 -1.18 16 30 H 0.11 -0.48 7.36 -51.93 -0.38 -0.87 16 31 H 0.09 -0.50 8.10 -51.93 -0.42 -0.92 16 32 H 0.07 -0.16 7.39 -51.93 -0.38 -0.55 16 33 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.40 -2.34 8.47 -40.82 -0.35 -2.69 16 35 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 36 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 37 H 0.07 0.05 7.61 -51.93 -0.39 -0.34 16 38 H 0.07 0.05 7.63 -51.93 -0.40 -0.35 16 39 H 0.13 0.16 6.30 -52.49 -0.33 -0.17 16 40 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 41 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 42 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 43 H -0.25 -0.59 7.05 56.52 0.40 -0.19 16 44 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 45 H 0.12 0.27 4.86 -52.49 -0.26 0.01 16 46 H 0.14 0.16 8.06 -52.49 -0.42 -0.26 16 47 H 0.09 -0.34 8.10 -51.93 -0.42 -0.76 16 48 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 LS Contribution 408.87 15.07 6.16 6.16 Total: 0.00 -14.95 408.87 -11.68 -26.63 By element: Atomic # 1 Polarization: -10.40 SS G_CDS: -7.17 Total: -17.57 kcal Atomic # 6 Polarization: 4.89 SS G_CDS: -2.08 Total: 2.81 kcal Atomic # 7 Polarization: 2.25 SS G_CDS: -0.33 Total: 1.92 kcal Atomic # 8 Polarization: -7.53 SS G_CDS: -2.60 Total: -10.13 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.07 Total: -5.56 kcal Atomic # 16 Polarization: -3.68 SS G_CDS: -0.57 Total: -4.26 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -14.95 -11.68 -26.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.952 kcal (2) G-P(sol) polarization free energy of solvation -14.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.629 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds