Wall clock time and date at job start Tue Mar 9 2021 13:12:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 O 1.42101 * 108.58138 * 2 1 4 4 O 1.42105 * 108.57730 * 228.97812 * 2 1 3 5 5 C 1.81397 * 101.92150 * 114.49339 * 2 1 3 6 6 H 1.09002 * 112.84546 * 311.18931 * 5 2 1 7 7 C 1.53775 * 113.69517 * 82.45892 * 5 2 1 8 8 C 1.53786 * 87.08209 * 139.99344 * 7 5 2 9 9 H 1.08999 * 113.69047 * 220.01056 * 8 7 5 10 10 C 1.53002 * 113.61152 * 89.11686 * 8 7 5 11 11 N 1.46496 * 109.46704 * 87.50670 * 10 8 7 12 12 C 1.34779 * 119.99914 * 179.97438 * 11 10 8 13 13 O 1.21284 * 119.99695 * 359.97438 * 12 11 10 14 14 C 1.50696 * 120.00395 * 179.97438 * 12 11 10 15 15 C 1.52997 * 109.47242 * 179.97438 * 14 12 11 16 16 O 1.42905 * 109.47264 * 180.02562 * 15 14 12 17 17 C 1.35897 * 117.00093 * 180.02562 * 16 15 14 18 18 C 1.38707 * 120.05413 * 180.02562 * 17 16 15 19 19 C 1.38169 * 119.94386 * 180.02562 * 18 17 16 20 20 C 1.50697 * 119.97175 * 180.02562 * 19 18 17 21 21 O 1.42907 * 109.47334 * 299.99597 * 20 19 18 22 22 Si 1.86300 * 109.47116 * 180.02562 * 20 19 18 23 23 C 1.38241 * 120.05726 * 359.97438 * 19 18 17 24 24 C 1.38289 * 120.10753 * 0.02562 * 23 19 18 25 25 C 1.38125 * 120.05977 * 359.68484 * 24 23 19 26 26 C 1.53777 * 113.61662 * 180.02562 * 5 2 1 27 27 H 1.08997 * 109.46761 * 305.51565 * 1 2 3 28 28 H 1.08999 * 109.46943 * 65.51042 * 1 2 3 29 29 H 1.09002 * 109.47397 * 185.50900 * 1 2 3 30 30 H 1.09002 * 113.61154 * 25.44856 * 7 5 2 31 31 H 1.08998 * 113.61466 * 254.54144 * 7 5 2 32 32 H 1.08992 * 109.47056 * 327.50338 * 10 8 7 33 33 H 1.08996 * 109.46698 * 207.50454 * 10 8 7 34 34 H 0.96994 * 120.00700 * 359.97438 * 11 10 8 35 35 H 1.09001 * 109.46948 * 60.00339 * 14 12 11 36 36 H 1.08992 * 109.47473 * 300.00461 * 14 12 11 37 37 H 1.09001 * 109.47289 * 60.00043 * 15 14 12 38 38 H 1.09004 * 109.47261 * 300.00299 * 15 14 12 39 39 H 1.08001 * 120.03269 * 359.97438 * 18 17 16 40 40 H 1.08995 * 109.47584 * 60.00166 * 20 19 18 41 41 H 0.96700 * 114.00179 * 180.02562 * 21 20 19 42 42 H 1.48499 * 110.00187 * 59.99990 * 22 20 19 43 43 H 1.48506 * 110.00296 * 181.31760 * 22 20 19 44 44 H 1.07994 * 119.94651 * 179.97438 * 23 19 18 45 45 H 1.08008 * 119.97238 * 179.97438 * 24 23 19 46 46 H 1.08000 * 120.02760 * 180.32268 * 25 24 23 47 47 H 1.08997 * 113.61932 * 105.38140 * 26 5 2 48 48 H 1.09008 * 113.68612 * 334.48539 * 26 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3469 0.0000 4 8 2.2667 -0.8841 -1.0163 5 6 2.1887 -0.7358 1.6151 6 1 1.6289 -0.2762 2.4297 7 6 2.1356 -2.2727 1.6214 8 6 3.3792 -2.2337 2.5251 9 1 4.1159 -3.0018 2.2898 10 6 3.0502 -2.1634 4.0177 11 7 2.8831 -3.5199 4.5452 12 6 2.5876 -3.7050 5.8471 13 8 2.4604 -2.7486 6.5819 14 6 2.4151 -5.1003 6.3897 15 6 2.0874 -5.0301 7.8825 16 8 1.9245 -6.3533 8.3972 17 6 1.6274 -6.4692 9.7182 18 6 1.4561 -7.7239 10.2842 19 6 1.1536 -7.8391 11.6274 20 6 0.9679 -9.2019 12.2431 21 8 -0.1067 -9.8785 11.5876 22 14 0.5714 -9.0165 14.0540 23 6 1.0220 -6.7052 12.4072 24 6 1.1923 -5.4532 11.8453 25 6 1.5007 -5.3329 10.5043 26 6 3.6946 -0.8645 1.8991 27 1 -0.3633 0.5970 0.8365 28 1 -0.3633 0.4260 -0.9352 29 1 -0.3634 -1.0229 0.0987 30 1 2.3196 -2.7198 0.6445 31 1 1.2509 -2.6770 2.1133 32 1 2.1270 -1.6019 4.1602 33 1 3.8634 -1.6657 4.5459 34 1 2.9852 -4.2848 3.9576 35 1 3.3380 -5.6623 6.2467 36 1 1.6015 -5.5975 5.8617 37 1 1.1647 -4.4679 8.0259 38 1 2.9015 -4.5330 8.4102 39 1 1.5584 -8.6100 9.6753 40 1 1.8848 -9.7802 12.1290 41 1 -0.2833 -10.7641 11.9336 42 1 -0.6769 -8.2301 14.2227 43 1 0.4173 -10.3544 14.6798 44 1 0.7851 -6.7973 13.4568 45 1 1.0886 -4.5688 12.4565 46 1 1.6387 -4.3550 10.0671 47 1 4.0681 -0.1324 2.6150 48 1 4.3062 -0.9265 0.9989 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:54 Heat of formation + Delta-G solvation = -115.900823 kcal Electronic energy + Delta-G solvation = -29812.230272 eV Core-core repulsion = 25348.816296 eV Total energy + Delta-G solvation = -4463.413976 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.89 seconds Orbital eigenvalues (eV) -41.44012 -41.06278 -40.14811 -39.00073 -38.02307 -37.40545 -37.07008 -35.63796 -33.42876 -32.53609 -30.94821 -30.73269 -29.42402 -27.17337 -27.00445 -25.93772 -24.59094 -23.58667 -21.98529 -21.56175 -20.58664 -19.84596 -19.09530 -18.64327 -18.53186 -17.89399 -17.54474 -17.33396 -17.26831 -17.13456 -17.01291 -16.76819 -16.31222 -16.05453 -15.75915 -15.61746 -15.18710 -14.79669 -14.52313 -14.47431 -14.35647 -14.30429 -14.24462 -13.99044 -13.92385 -13.82314 -13.47246 -13.43131 -13.21724 -13.06759 -12.98584 -12.93170 -12.84592 -12.32832 -12.12196 -11.95278 -11.94442 -11.89255 -11.79957 -11.62853 -11.27597 -11.02618 -10.55755 -10.30163 -9.82125 -9.17725 -4.95666 -1.10345 0.28109 0.48425 1.26390 1.44049 1.58483 1.60163 1.63834 1.95997 2.37694 2.42804 2.66738 2.69686 2.99487 3.16452 3.23415 3.30179 3.32736 3.47223 3.71476 3.74057 3.78387 3.79289 3.87424 3.90930 3.95272 4.09718 4.11339 4.24691 4.26415 4.27411 4.28883 4.30883 4.46423 4.49509 4.53543 4.55525 4.57689 4.60109 4.62732 4.67635 4.72638 4.92315 5.04137 5.19241 5.32424 5.44760 5.53371 5.73453 6.22660 6.41641 6.42615 6.99234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.655 4.655 2 S 2.422 3.578 3 O -0.937 6.937 4 O -0.935 6.935 5 C -0.610 4.610 6 H 0.153 0.847 7 C -0.112 4.112 8 C -0.115 4.115 9 H 0.098 0.902 10 C 0.134 3.866 11 N -0.728 5.728 12 C 0.520 3.480 13 O -0.537 6.537 14 C -0.141 4.141 15 C 0.074 3.926 16 O -0.316 6.316 17 C 0.132 3.868 18 C -0.124 4.124 19 C -0.036 4.036 20 C -0.077 4.077 21 O -0.535 6.535 22 Si 0.686 3.314 23 C -0.152 4.152 24 C -0.073 4.073 25 C -0.203 4.203 26 C -0.097 4.097 27 H 0.128 0.872 28 H 0.130 0.870 29 H 0.129 0.871 30 H 0.110 0.890 31 H 0.088 0.912 32 H 0.073 0.927 33 H 0.077 0.923 34 H 0.405 0.595 35 H 0.108 0.892 36 H 0.107 0.893 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.132 0.868 40 H 0.079 0.921 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.261 1.261 44 H 0.129 0.871 45 H 0.132 0.868 46 H 0.133 0.867 47 H 0.094 0.906 48 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.705 -2.857 1.201 3.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.604 3.396 3 O -0.935 6.935 4 O -0.933 6.933 5 C -0.718 4.718 6 H 0.171 0.829 7 C -0.150 4.150 8 C -0.135 4.135 9 H 0.116 0.884 10 C 0.011 3.989 11 N -0.381 5.381 12 C 0.307 3.693 13 O -0.414 6.414 14 C -0.181 4.181 15 C -0.001 4.001 16 O -0.230 6.230 17 C 0.087 3.913 18 C -0.143 4.143 19 C -0.036 4.036 20 C -0.187 4.187 21 O -0.342 6.342 22 Si 0.587 3.413 23 C -0.170 4.170 24 C -0.091 4.091 25 C -0.221 4.221 26 C -0.136 4.136 27 H 0.147 0.853 28 H 0.148 0.852 29 H 0.147 0.853 30 H 0.129 0.871 31 H 0.107 0.893 32 H 0.092 0.908 33 H 0.095 0.905 34 H 0.240 0.760 35 H 0.126 0.874 36 H 0.126 0.874 37 H 0.090 0.910 38 H 0.091 0.909 39 H 0.150 0.850 40 H 0.097 0.903 41 H 0.228 0.772 42 H -0.179 1.179 43 H -0.186 1.186 44 H 0.146 0.854 45 H 0.150 0.850 46 H 0.150 0.850 47 H 0.112 0.888 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 0.611 -1.577 1.210 2.080 hybrid contribution -1.209 -1.259 -0.268 1.766 sum -0.598 -2.836 0.942 3.047 Atomic orbital electron populations 1.30239 1.26623 1.11645 1.11943 1.07835 0.78503 0.75665 0.77548 1.93617 1.79082 1.34290 1.86463 1.93611 1.79204 1.67149 1.53287 1.31778 1.07712 1.08862 1.23489 0.82893 1.22848 0.99829 0.89927 1.02400 1.22475 0.98520 0.98890 0.93590 0.88407 1.21189 1.02479 0.83616 0.91617 1.45917 1.72668 1.09440 1.10089 1.20306 0.76131 0.90963 0.81942 1.90765 1.50005 1.43120 1.57513 1.21462 1.05822 0.95079 0.95766 1.22407 1.02556 0.82257 0.92910 1.85968 1.85233 1.30087 1.21751 1.18915 0.95733 0.94074 0.82624 1.20202 1.04157 0.95450 0.94447 1.19012 0.98202 0.93186 0.93236 1.24837 0.92689 0.92914 1.08237 1.86596 1.53128 1.33514 1.61010 0.94958 0.87888 0.82805 0.75674 1.20859 1.04407 0.92175 0.99539 1.20902 0.96542 0.97371 0.94253 1.21380 1.07309 0.98039 0.95409 1.22594 0.90475 0.97802 1.02686 0.85303 0.85164 0.85253 0.87139 0.89320 0.90830 0.90483 0.76043 0.87359 0.87426 0.90966 0.90862 0.84968 0.90332 0.77184 1.17939 1.18641 0.85373 0.85041 0.84955 0.88751 0.88057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 2.75 10.62 101.05 1.07 3.82 16 2 S 2.42 -3.78 5.34 -107.50 -0.57 -4.35 16 3 O -0.94 -2.70 18.10 -57.83 -1.05 -3.75 16 4 O -0.94 -1.73 17.20 -57.83 -0.99 -2.73 16 5 C -0.61 2.43 3.82 -25.92 -0.10 2.33 16 6 H 0.15 -0.90 7.72 -51.93 -0.40 -1.30 16 7 C -0.11 0.52 7.16 -25.92 -0.19 0.33 16 8 C -0.12 0.49 3.94 -89.78 -0.35 0.14 16 9 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 10 C 0.13 -0.39 5.35 -4.04 -0.02 -0.41 16 11 N -0.73 2.32 5.56 -60.30 -0.33 1.98 16 12 C 0.52 -0.31 7.83 -10.99 -0.09 -0.40 16 13 O -0.54 -1.90 15.98 5.55 0.09 -1.81 16 14 C -0.14 0.33 6.07 -27.89 -0.17 0.16 16 15 C 0.07 0.01 4.03 37.16 0.15 0.16 16 16 O -0.32 -0.62 10.14 -19.42 -0.20 -0.82 16 17 C 0.13 0.34 6.69 -39.22 -0.26 0.08 16 18 C -0.12 -0.34 9.55 -39.43 -0.38 -0.72 16 19 C -0.04 -0.07 5.42 -104.65 -0.57 -0.64 16 20 C -0.08 -0.03 2.81 36.00 0.10 0.08 16 21 O -0.54 -0.82 12.74 -35.23 -0.45 -1.27 16 22 Si 0.69 -0.47 29.78 -169.99 -5.06 -5.54 16 23 C -0.15 -0.16 8.67 -39.56 -0.34 -0.51 16 24 C -0.07 -0.06 10.04 -39.60 -0.40 -0.46 16 25 C -0.20 -0.33 9.04 -39.43 -0.36 -0.68 16 26 C -0.10 0.32 7.26 -25.90 -0.19 0.13 16 27 H 0.13 -0.73 8.14 -51.93 -0.42 -1.15 16 28 H 0.13 -0.53 8.14 -51.92 -0.42 -0.95 16 29 H 0.13 -0.76 8.14 -51.92 -0.42 -1.19 16 30 H 0.11 -0.49 7.37 -51.93 -0.38 -0.87 16 31 H 0.09 -0.50 8.10 -51.93 -0.42 -0.93 16 32 H 0.07 -0.17 7.39 -51.93 -0.38 -0.55 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.40 -2.36 8.47 -40.82 -0.35 -2.71 16 35 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 36 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 37 H 0.07 0.04 7.63 -51.93 -0.40 -0.36 16 38 H 0.07 0.02 7.61 -51.93 -0.40 -0.37 16 39 H 0.13 0.31 8.06 -52.49 -0.42 -0.11 16 40 H 0.08 -0.11 7.96 -51.93 -0.41 -0.53 16 41 H 0.38 -0.99 8.74 45.56 0.40 -0.59 16 42 H -0.25 -0.65 7.11 56.52 0.40 -0.24 16 43 H -0.26 -0.31 7.11 56.52 0.40 0.10 16 44 H 0.13 -0.11 4.87 -52.49 -0.26 -0.37 16 45 H 0.13 -0.19 8.06 -52.48 -0.42 -0.61 16 46 H 0.13 0.06 6.30 -52.49 -0.33 -0.27 16 47 H 0.09 -0.35 8.10 -51.93 -0.42 -0.77 16 48 H 0.10 -0.34 8.10 -51.92 -0.42 -0.76 16 LS Contribution 408.82 15.07 6.16 6.16 Total: 0.00 -14.68 408.82 -11.66 -26.35 By element: Atomic # 1 Polarization: -10.49 SS G_CDS: -7.17 Total: -17.66 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: -2.08 Total: 3.43 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -0.33 Total: 1.98 kcal Atomic # 8 Polarization: -7.78 SS G_CDS: -2.60 Total: -10.38 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.06 Total: -5.54 kcal Atomic # 16 Polarization: -3.78 SS G_CDS: -0.57 Total: -4.35 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -14.68 -11.66 -26.35 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.555 kcal (2) G-P(sol) polarization free energy of solvation -14.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.89 seconds