Wall clock time and date at job start Tue Mar 9 2021 13:13:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 O 1.42100 * 108.58172 * 2 1 4 4 O 1.42100 * 108.57754 * 131.02638 * 2 1 3 5 5 C 1.81406 * 101.92209 * 245.50951 * 2 1 3 6 6 H 1.08997 * 112.84776 * 311.19657 * 5 2 1 7 7 C 1.53782 * 113.61114 * 82.50718 * 5 2 1 8 8 C 1.53775 * 87.08196 * 139.98161 * 7 5 2 9 9 H 1.09000 * 113.61339 * 220.02040 * 8 7 5 10 10 C 1.52996 * 113.69358 * 89.12269 * 8 7 5 11 11 N 1.46501 * 109.46970 * 87.46457 * 10 8 7 12 12 C 1.34783 * 119.99807 * 179.97438 * 11 10 8 13 13 O 1.21273 * 120.00160 * 0.02562 * 12 11 10 14 14 C 1.50693 * 119.99760 * 179.97438 * 12 11 10 15 15 F 1.39907 * 109.47363 * 300.00374 * 14 12 11 16 16 F 1.39899 * 109.47192 * 60.00328 * 14 12 11 17 17 O 1.42906 * 109.47319 * 180.02562 * 14 12 11 18 18 C 1.35893 * 116.99987 * 180.02562 * 17 14 12 19 19 C 1.38729 * 120.06127 * 359.72804 * 18 17 14 20 20 C 1.38146 * 119.94679 * 179.74248 * 19 18 17 21 21 C 1.38261 * 120.05343 * 0.50975 * 20 19 18 22 22 C 1.50703 * 119.94536 * 179.74653 * 21 20 19 23 23 O 1.42898 * 109.47220 * 120.01455 * 22 21 20 24 24 Si 1.86299 * 109.46759 * 0.02562 * 22 21 20 25 25 C 1.38266 * 120.11563 * 359.76003 * 21 20 19 26 26 C 1.38152 * 120.04982 * 359.97438 * 25 21 20 27 27 C 1.53781 * 87.08132 * 334.56195 * 8 7 5 28 28 H 1.08999 * 109.46744 * 54.48820 * 1 2 3 29 29 H 1.08998 * 109.46870 * 174.48916 * 1 2 3 30 30 H 1.08997 * 109.46830 * 294.48924 * 1 2 3 31 31 H 1.09008 * 113.61094 * 254.52886 * 7 5 2 32 32 H 1.08993 * 113.61813 * 25.42931 * 7 5 2 33 33 H 1.09001 * 109.47043 * 207.46542 * 10 8 7 34 34 H 1.08995 * 109.47467 * 327.46251 * 10 8 7 35 35 H 0.96996 * 119.99970 * 359.97438 * 11 10 8 36 36 H 1.08006 * 120.02698 * 359.97438 * 19 18 17 37 37 H 1.08003 * 119.97483 * 180.22478 * 20 19 18 38 38 H 1.09003 * 109.47197 * 240.02001 * 22 21 20 39 39 H 0.96695 * 114.00482 * 299.99773 * 23 22 21 40 40 H 1.48497 * 110.00390 * 58.68441 * 24 22 21 41 41 H 1.48503 * 109.99717 * 180.02562 * 24 22 21 42 42 H 1.07999 * 119.97789 * 179.97438 * 25 21 20 43 43 H 1.07998 * 120.02459 * 179.97438 * 26 25 21 44 44 H 1.08995 * 113.61786 * 270.88639 * 27 8 7 45 45 H 1.09004 * 113.68924 * 139.99406 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3469 0.0000 4 8 2.2667 -0.8842 1.0162 5 6 2.1887 -0.7358 -1.6152 6 1 1.6289 -1.6519 -1.8031 7 6 2.1362 0.2700 -2.7774 8 6 3.3796 -0.4370 -3.3419 9 1 4.1159 0.2462 -3.7653 10 6 3.0524 -1.6079 -4.2708 11 7 2.8855 -1.1134 -5.6397 12 6 2.5915 -1.9728 -6.6355 13 8 2.4646 -3.1553 -6.3982 14 6 2.4193 -1.4641 -8.0434 15 9 1.3739 -0.5350 -8.0790 16 9 3.6033 -0.8501 -8.4655 17 8 2.1138 -2.5577 -8.9111 18 6 1.9272 -2.2687 -10.2258 19 6 2.0302 -0.9588 -10.6707 20 6 1.8453 -0.6684 -12.0086 21 6 1.5474 -1.6805 -12.9021 22 6 1.3405 -1.3602 -14.3601 23 8 2.2992 -2.0721 -15.1449 24 14 1.5540 0.4708 -14.6299 25 6 1.4385 -2.9862 -12.4603 26 6 1.6280 -3.2825 -11.1243 27 6 3.6947 -0.8649 -1.8988 28 1 -0.3633 0.5969 -0.8365 29 1 -0.3633 -1.0229 -0.0987 30 1 -0.3633 0.4260 0.9352 31 1 1.2515 0.1655 -3.4056 32 1 2.3205 1.3000 -2.4721 33 1 3.8664 -2.3323 -4.2428 34 1 2.1295 -2.0857 -3.9420 35 1 2.9866 -0.1676 -5.8293 36 1 2.2586 -0.1671 -9.9724 37 1 1.9291 0.3508 -12.3561 38 1 0.3348 -1.6566 -14.6581 39 1 3.2180 -1.8576 -14.9333 40 1 2.9105 0.8931 -14.1977 41 1 1.3519 0.7998 -16.0638 42 1 1.2053 -3.7750 -13.1601 43 1 1.5425 -4.3024 -10.7796 44 1 4.3050 -0.1452 -1.3534 45 1 4.0686 -1.8855 -1.8164 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17836384_4549640.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:30 Heat of formation + Delta-G solvation = -206.544167 kcal Electronic energy + Delta-G solvation = -34167.056200 eV Core-core repulsion = 28916.341302 eV Total energy + Delta-G solvation = -5250.714898 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.103 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.88090 -48.85017 -41.49271 -41.23143 -40.10086 -39.28107 -38.00387 -37.38652 -37.04839 -35.95304 -32.46405 -32.05350 -30.58890 -30.24370 -28.28087 -26.83935 -26.32996 -25.24541 -24.31973 -22.76625 -22.33906 -20.93001 -20.47751 -19.90095 -19.68643 -19.33137 -18.59259 -18.46366 -17.67177 -17.32998 -17.13567 -16.90745 -16.87550 -16.57831 -16.56742 -16.27837 -15.91496 -15.83418 -15.67985 -15.41186 -15.35675 -15.10286 -15.07863 -14.85845 -14.40217 -14.38076 -14.22103 -14.14672 -14.02939 -13.92843 -13.62135 -13.54237 -13.31656 -13.22036 -13.05926 -13.03219 -12.78245 -12.42057 -12.26291 -11.97337 -11.82696 -11.66585 -11.65977 -11.52154 -10.94430 -10.65367 -10.54852 -10.18263 -9.59264 -4.93048 -0.91120 0.01720 0.15879 0.46881 0.64104 1.29913 1.59331 1.68011 1.84085 1.95638 2.00681 2.45512 2.63981 2.76293 2.91617 3.23256 3.26834 3.38976 3.42053 3.50776 3.52295 3.55216 3.64936 3.72193 4.08096 4.09695 4.12968 4.20923 4.24576 4.33673 4.40574 4.53738 4.59076 4.60049 4.65686 4.76269 4.83202 4.90345 4.92055 4.93430 4.97684 4.97959 5.04692 5.24915 5.34377 5.38391 5.80807 5.85703 6.45266 6.47480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.644 4.644 2 S 2.415 3.585 3 O -0.980 6.980 4 O -0.994 6.994 5 C -0.594 4.594 6 H 0.181 0.819 7 C -0.112 4.112 8 C -0.108 4.108 9 H 0.113 0.887 10 C 0.130 3.870 11 N -0.682 5.682 12 C 0.516 3.484 13 O -0.508 6.508 14 C 0.434 3.566 15 F -0.169 7.169 16 F -0.173 7.173 17 O -0.305 6.305 18 C 0.086 3.914 19 C -0.193 4.193 20 C -0.077 4.077 21 C -0.139 4.139 22 C -0.078 4.078 23 O -0.547 6.547 24 Si 0.762 3.238 25 C -0.058 4.058 26 C -0.137 4.137 27 C -0.109 4.109 28 H 0.153 0.847 29 H 0.149 0.851 30 H 0.128 0.872 31 H 0.110 0.890 32 H 0.111 0.889 33 H 0.082 0.918 34 H 0.089 0.911 35 H 0.425 0.575 36 H 0.143 0.857 37 H 0.154 0.846 38 H 0.130 0.870 39 H 0.386 0.614 40 H -0.282 1.282 41 H -0.302 1.302 42 H 0.149 0.851 43 H 0.144 0.856 44 H 0.097 0.903 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.466 3.717 -0.882 5.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.796 4.796 2 S 2.604 3.396 3 O -0.977 6.977 4 O -0.991 6.991 5 C -0.705 4.705 6 H 0.198 0.802 7 C -0.150 4.150 8 C -0.128 4.128 9 H 0.131 0.869 10 C 0.009 3.991 11 N -0.336 5.336 12 C 0.294 3.706 13 O -0.382 6.382 14 C 0.356 3.644 15 F -0.150 7.150 16 F -0.154 7.154 17 O -0.222 6.222 18 C 0.044 3.956 19 C -0.211 4.211 20 C -0.095 4.095 21 C -0.140 4.140 22 C -0.187 4.187 23 O -0.355 6.355 24 Si 0.667 3.333 25 C -0.076 4.076 26 C -0.155 4.155 27 C -0.148 4.148 28 H 0.172 0.828 29 H 0.168 0.832 30 H 0.147 0.853 31 H 0.129 0.871 32 H 0.129 0.871 33 H 0.101 0.899 34 H 0.107 0.893 35 H 0.263 0.737 36 H 0.161 0.839 37 H 0.171 0.829 38 H 0.148 0.852 39 H 0.236 0.764 40 H -0.209 1.209 41 H -0.230 1.230 42 H 0.167 0.833 43 H 0.162 0.838 44 H 0.116 0.884 45 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.059 3.399 -0.541 4.604 hybrid contribution 0.666 -0.345 -0.651 0.993 sum -2.393 3.054 -1.192 4.059 Atomic orbital electron populations 1.30115 1.22842 1.13621 1.13015 1.07625 0.79723 0.74484 0.77719 1.93550 1.80841 1.36107 1.87193 1.93547 1.80968 1.67763 1.56794 1.31713 1.07713 1.13206 1.17868 0.80155 1.22970 1.00336 0.97645 0.94073 1.22361 0.99408 0.96913 0.94090 0.86859 1.21530 1.03621 0.96460 0.77521 1.45723 1.68558 1.11865 1.07501 1.19328 0.79894 0.87077 0.84292 1.90868 1.48892 1.16466 1.81999 1.21799 0.74384 0.77188 0.91042 1.93202 1.58192 1.66800 1.96801 1.93198 1.47598 1.83415 1.91198 1.86644 1.85024 1.32865 1.17716 1.19229 0.99757 0.95259 0.81378 1.21610 1.06305 0.94689 0.98508 1.21026 0.96794 0.99757 0.91884 1.20420 1.02971 0.94042 0.96552 1.25181 0.96481 1.09634 0.87363 1.86576 1.19786 1.66860 1.62307 0.94158 0.84599 0.74378 0.80121 1.21051 0.95771 0.96904 0.93894 1.20703 1.03534 0.99028 0.92235 1.22718 0.90976 1.04957 0.96185 0.82840 0.83224 0.85333 0.87136 0.87065 0.89934 0.89274 0.73656 0.83922 0.82882 0.85183 0.76431 1.20890 1.23034 0.83311 0.83798 0.88425 0.88202 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.64 6.85 10.62 113.37 1.20 8.05 16 2 S 2.42 -8.88 5.34 -56.49 -0.30 -9.18 16 3 O -0.98 -3.92 17.19 -127.37 -2.19 -6.11 16 4 O -0.99 -6.46 18.10 -127.37 -2.30 -8.77 16 5 C -0.59 6.27 3.82 31.12 0.12 6.39 16 6 H 0.18 -2.87 7.72 -2.39 -0.02 -2.88 16 7 C -0.11 1.40 7.16 31.12 0.22 1.62 16 8 C -0.11 1.26 3.94 -10.27 -0.04 1.22 16 9 H 0.11 -1.55 8.14 -2.39 -0.02 -1.57 16 10 C 0.13 -1.16 5.36 86.38 0.46 -0.70 16 11 N -0.68 5.00 5.56 -463.07 -2.57 2.42 16 12 C 0.52 0.41 7.34 87.65 0.64 1.06 16 13 O -0.51 -4.27 16.50 16.03 0.26 -4.01 16 14 C 0.43 0.59 2.05 71.23 0.15 0.73 16 15 F -0.17 0.16 15.28 44.97 0.69 0.85 16 16 F -0.17 -0.04 15.31 44.97 0.69 0.65 16 17 O -0.31 -1.93 9.60 -73.31 -0.70 -2.64 16 18 C 0.09 0.38 6.48 22.50 0.15 0.53 16 19 C -0.19 -0.26 8.26 22.37 0.18 -0.07 16 20 C -0.08 0.11 8.66 22.25 0.19 0.30 16 21 C -0.14 0.13 5.39 -19.85 -0.11 0.02 16 22 C -0.08 0.17 2.82 71.24 0.20 0.38 16 23 O -0.55 -0.56 12.77 -148.98 -1.90 -2.46 16 24 Si 0.76 -2.52 29.78 68.60 2.04 -0.48 16 25 C -0.06 -0.01 9.60 22.26 0.21 0.20 16 26 C -0.14 -0.35 9.99 22.37 0.22 -0.13 16 27 C -0.11 0.96 7.26 31.12 0.23 1.18 16 28 H 0.15 -2.34 8.14 -2.39 -0.02 -2.36 16 29 H 0.15 -2.16 8.14 -2.39 -0.02 -2.18 16 30 H 0.13 -1.22 8.14 -2.39 -0.02 -1.24 16 31 H 0.11 -1.78 8.10 -2.38 -0.02 -1.79 16 32 H 0.11 -1.27 7.36 -2.39 -0.02 -1.28 16 33 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 34 H 0.09 -0.84 7.40 -2.39 -0.02 -0.85 16 35 H 0.42 -5.37 8.47 -92.71 -0.79 -6.16 16 36 H 0.14 -0.12 5.10 -2.91 -0.01 -0.13 16 37 H 0.15 -0.92 4.87 -2.91 -0.01 -0.93 16 38 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 39 H 0.39 -1.64 8.70 -74.06 -0.64 -2.28 16 40 H -0.28 -0.14 7.11 99.48 0.71 0.56 16 41 H -0.30 -1.41 7.11 99.48 0.71 -0.70 16 42 H 0.15 -0.31 8.06 -2.91 -0.02 -0.34 16 43 H 0.14 0.13 8.06 -2.91 -0.02 0.11 16 44 H 0.10 -0.72 8.10 -2.39 -0.02 -0.74 16 45 H 0.10 -0.95 8.10 -2.39 -0.02 -0.97 16 Total: 0.00 -33.28 397.10 -2.57 -35.86 By element: Atomic # 1 Polarization: -26.59 SS G_CDS: -0.32 Total: -26.91 kcal Atomic # 6 Polarization: 16.74 SS G_CDS: 4.04 Total: 20.77 kcal Atomic # 7 Polarization: 5.00 SS G_CDS: -2.57 Total: 2.42 kcal Atomic # 8 Polarization: -17.14 SS G_CDS: -6.84 Total: -23.98 kcal Atomic # 9 Polarization: 0.13 SS G_CDS: 1.38 Total: 1.50 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.04 Total: -0.48 kcal Atomic # 16 Polarization: -8.88 SS G_CDS: -0.30 Total: -9.18 kcal Total: -33.28 -2.57 -35.86 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_4549640.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -170.689 kcal (2) G-P(sol) polarization free energy of solvation -33.282 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -203.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.573 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -206.544 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds