Wall clock time and date at job start Tue Mar 9 2021 13:14:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37934 * 120.06857 * 2 1 4 4 C 1.38385 * 120.14108 * 180.28075 * 3 2 1 5 5 C 1.50699 * 119.85565 * 179.72077 * 4 3 2 6 6 C 1.38339 * 120.29324 * 359.74016 * 4 3 2 7 7 C 1.50695 * 119.93090 * 180.02562 * 6 4 3 8 8 O 1.42901 * 109.47353 * 74.97669 * 7 6 4 9 9 Si 1.86302 * 109.47529 * 194.98164 * 7 6 4 10 10 C 1.37976 * 120.14516 * 359.97438 * 6 4 3 11 11 C 1.39561 * 119.85126 * 0.02562 * 10 6 4 12 12 C 1.47846 * 120.14509 * 179.97438 * 11 10 6 13 13 O 1.21557 * 120.00401 * 173.76176 * 12 11 10 14 14 N 1.34778 * 119.99745 * 353.75042 * 12 11 10 15 15 C 1.46506 * 119.99974 * 180.02562 * 14 12 11 16 16 C 1.52995 * 109.47228 * 180.02562 * 15 14 12 17 17 H 1.09003 * 112.91002 * 316.25043 * 16 15 14 18 18 C 1.53784 * 113.61533 * 87.50398 * 16 15 14 19 19 C 1.53773 * 87.08018 * 89.11693 * 18 16 15 20 20 H 1.09000 * 113.61621 * 270.88102 * 19 18 16 21 21 S 1.81405 * 113.69026 * 139.99554 * 19 18 16 22 22 C 1.81396 * 101.92293 * 82.46270 * 21 19 18 23 23 O 1.42098 * 108.57865 * 196.94977 * 21 19 18 24 24 O 1.42099 * 108.57714 * 327.97134 * 21 19 18 25 25 C 1.53773 * 87.08443 * 25.43469 * 19 18 16 26 26 H 1.08996 * 109.46671 * 263.66363 * 1 2 3 27 27 H 1.08990 * 109.47663 * 23.66437 * 1 2 3 28 28 H 1.09001 * 109.46751 * 143.66800 * 1 2 3 29 29 H 1.07994 * 119.93564 * 0.02562 * 3 2 1 30 30 H 1.08996 * 109.47312 * 270.02324 * 5 4 3 31 31 H 1.09005 * 109.46792 * 30.02116 * 5 4 3 32 32 H 1.08996 * 109.47470 * 150.01886 * 5 4 3 33 33 H 1.09002 * 109.46930 * 314.98355 * 7 6 4 34 34 H 0.96697 * 114.00240 * 300.00853 * 8 7 6 35 35 H 1.48502 * 109.99581 * 298.67957 * 9 7 6 36 36 H 1.48501 * 109.99925 * 59.99855 * 9 7 6 37 37 H 1.08004 * 120.07947 * 180.02562 * 10 6 4 38 38 H 0.96998 * 120.00290 * 0.02562 * 14 12 11 39 39 H 1.08995 * 109.47144 * 60.00232 * 15 14 12 40 40 H 1.09000 * 109.47084 * 300.00532 * 15 14 12 41 41 H 1.08997 * 113.61308 * 334.56206 * 18 16 15 42 42 H 1.09001 * 113.61482 * 203.66611 * 18 16 15 43 43 H 1.08999 * 109.47433 * 60.00196 * 22 21 19 44 44 H 1.08999 * 109.46946 * 180.02562 * 22 21 19 45 45 H 1.09007 * 109.47189 * 299.99621 * 22 21 19 46 46 H 1.09003 * 113.61995 * 89.11773 * 25 19 18 47 47 H 1.09007 * 113.61651 * 220.02068 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 -0.0059 5 6 4.3305 2.5034 -0.0122 6 6 4.2813 0.0019 -0.0063 7 6 5.7882 0.0133 -0.0122 8 8 6.2670 0.3686 1.2866 9 14 6.4205 -1.6795 -0.4655 10 6 3.6022 -1.1991 -0.0004 11 6 2.2066 -1.2080 0.0055 12 6 1.4722 -2.4911 0.0113 13 8 0.2626 -2.4987 0.1308 14 7 2.1441 -3.6526 -0.1162 15 6 1.4164 -4.9241 -0.1111 16 6 2.4070 -6.0793 -0.2691 17 1 3.1619 -5.8895 -1.0322 18 6 2.9901 -6.5776 1.0638 19 6 1.7947 -7.5422 1.1358 20 1 0.9215 -7.1192 1.6325 21 16 2.2259 -9.1924 1.7536 22 6 2.2082 -8.9366 3.5494 23 8 1.1788 -10.0909 1.4139 24 8 3.5555 -9.4929 1.3521 25 6 1.7330 -7.4555 -0.3983 26 1 -0.3632 -0.1134 1.0214 27 1 -0.3634 0.9411 -0.4124 28 1 -0.3633 -0.8279 -0.6089 29 1 1.6583 2.1290 0.0004 30 1 4.5063 2.8165 -1.0413 31 1 3.7408 3.2620 0.5027 32 1 5.2857 2.3779 0.4976 33 1 6.1432 0.7412 -0.7418 34 1 5.9761 1.2400 1.5882 35 1 5.9698 -2.6758 0.5393 36 1 5.9296 -2.0606 -1.8143 37 1 4.1492 -2.1304 -0.0004 38 1 3.1093 -3.6466 -0.2114 39 1 0.7054 -4.9392 -0.9371 40 1 0.8802 -5.0321 0.8318 41 1 2.9899 -5.8225 1.8499 42 1 3.9514 -7.0806 0.9590 43 1 1.2160 -8.6095 3.8600 44 1 2.4569 -9.8713 4.0519 45 1 2.9416 -8.1753 3.8152 46 1 2.3506 -8.1986 -0.9029 47 1 0.7178 -7.4092 -0.7926 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_9599494.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:37 Heat of formation + Delta-G solvation = -82.418619 kcal Electronic energy + Delta-G solvation = -29548.925657 eV Core-core repulsion = 25405.645771 eV Total energy + Delta-G solvation = -4143.279886 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.138 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.81654 -40.78434 -39.79515 -38.00136 -37.71498 -37.04664 -35.82646 -34.38935 -33.56476 -30.75669 -30.19246 -29.01132 -28.37123 -27.13630 -25.76694 -25.23948 -23.86539 -22.39537 -21.39887 -20.48461 -19.82548 -18.86221 -18.61209 -18.34628 -17.30320 -17.24451 -17.03065 -16.71018 -16.55476 -16.40732 -16.30053 -15.89286 -15.52705 -15.13846 -14.97297 -14.76504 -14.58866 -14.41383 -14.27414 -14.17438 -13.99933 -13.90710 -13.84331 -13.60399 -13.37496 -13.19631 -13.04518 -13.02627 -12.89917 -12.84611 -12.78894 -12.67205 -12.24288 -12.09743 -11.92479 -11.85210 -11.38026 -11.24941 -11.17891 -10.67442 -10.28580 -10.01705 -9.69970 -4.95588 -1.07682 -0.35054 0.06880 1.21700 1.50688 1.62782 1.70231 1.78823 1.91731 2.44087 2.57130 2.68918 3.01849 3.18545 3.24332 3.29658 3.36522 3.44363 3.46414 3.65539 3.68710 3.74122 3.81809 3.94595 4.00544 4.02344 4.12111 4.22377 4.29670 4.32018 4.34628 4.39384 4.40399 4.51269 4.56299 4.59109 4.60142 4.61675 4.69720 4.75905 4.84061 4.84881 4.94407 4.97766 5.13007 5.26416 5.32297 5.46926 5.69389 6.28582 6.39188 7.06494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.010 4.010 3 C -0.127 4.127 4 C -0.041 4.041 5 C -0.126 4.126 6 C -0.129 4.129 7 C -0.083 4.083 8 O -0.533 6.533 9 Si 0.742 3.258 10 C -0.078 4.078 11 C -0.143 4.143 12 C 0.560 3.440 13 O -0.524 6.524 14 N -0.729 5.729 15 C 0.136 3.864 16 C -0.118 4.118 17 H 0.096 0.904 18 C -0.113 4.113 19 C -0.609 4.609 20 H 0.154 0.846 21 S 2.424 3.576 22 C -0.655 4.655 23 O -0.937 6.937 24 O -0.935 6.935 25 C -0.094 4.094 26 H 0.078 0.922 27 H 0.061 0.939 28 H 0.096 0.904 29 H 0.135 0.865 30 H 0.081 0.919 31 H 0.077 0.923 32 H 0.069 0.931 33 H 0.077 0.923 34 H 0.363 0.637 35 H -0.251 1.251 36 H -0.246 1.246 37 H 0.123 0.877 38 H 0.398 0.602 39 H 0.079 0.921 40 H 0.075 0.925 41 H 0.088 0.912 42 H 0.111 0.889 43 H 0.128 0.872 44 H 0.130 0.870 45 H 0.129 0.871 46 H 0.101 0.899 47 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.757 5.127 0.274 6.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.011 4.011 3 C -0.145 4.145 4 C -0.041 4.041 5 C -0.182 4.182 6 C -0.129 4.129 7 C -0.192 4.192 8 O -0.340 6.340 9 Si 0.641 3.359 10 C -0.096 4.096 11 C -0.146 4.146 12 C 0.348 3.652 13 O -0.402 6.402 14 N -0.382 5.382 15 C 0.013 3.987 16 C -0.137 4.137 17 H 0.114 0.886 18 C -0.151 4.151 19 C -0.718 4.718 20 H 0.171 0.829 21 S 2.606 3.394 22 C -0.804 4.804 23 O -0.935 6.935 24 O -0.932 6.932 25 C -0.133 4.133 26 H 0.097 0.903 27 H 0.080 0.920 28 H 0.114 0.886 29 H 0.153 0.847 30 H 0.100 0.900 31 H 0.096 0.904 32 H 0.088 0.912 33 H 0.095 0.905 34 H 0.212 0.788 35 H -0.176 1.176 36 H -0.171 1.171 37 H 0.140 0.860 38 H 0.233 0.767 39 H 0.097 0.903 40 H 0.094 0.906 41 H 0.107 0.893 42 H 0.129 0.871 43 H 0.147 0.853 44 H 0.148 0.852 45 H 0.147 0.853 46 H 0.120 0.880 47 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 3.098 2.914 -0.346 4.268 hybrid contribution -1.039 1.868 0.824 2.290 sum 2.059 4.782 0.478 5.228 Atomic orbital electron populations 1.21122 0.89475 1.03419 1.03915 1.20105 0.97131 0.91183 0.92702 1.21030 0.93242 0.97941 1.02259 1.20011 0.93771 0.94877 0.95450 1.20986 1.00045 0.93780 1.03387 1.20041 0.96240 0.92796 1.03834 1.25307 0.91041 1.14223 0.88597 1.86808 1.75124 1.39932 1.32163 0.92895 0.91733 0.72274 0.79035 1.21064 0.93263 0.97393 0.97895 1.19641 0.92930 0.93390 1.08665 1.18209 0.87082 0.83494 0.76368 1.90760 1.13468 1.87049 1.48928 1.45925 1.11017 1.05898 1.75344 1.21200 0.93758 0.80558 1.03211 1.22488 0.98522 0.94160 0.98572 0.88583 1.22858 0.95706 0.97748 0.98830 1.31779 1.09503 1.22013 1.08509 0.82854 1.07787 0.75542 0.77515 0.78526 1.30238 1.11607 1.12313 1.26284 1.93615 1.57926 1.59880 1.82032 1.93609 1.36635 1.82255 1.80732 1.22572 1.03569 0.97305 0.89887 0.90301 0.91987 0.88560 0.84698 0.90010 0.90427 0.91213 0.90487 0.78816 1.17582 1.17073 0.85986 0.76655 0.90318 0.90629 0.89350 0.87081 0.85319 0.85169 0.85265 0.88037 0.88702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.20 8.73 36.01 0.31 0.11 16 2 C -0.01 -0.02 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.05 9.31 -39.64 -0.37 -0.42 16 4 C -0.04 0.01 5.87 -104.53 -0.61 -0.61 16 5 C -0.13 0.36 9.27 36.01 0.33 0.69 16 6 C -0.13 -0.07 5.26 -104.68 -0.55 -0.62 16 7 C -0.08 0.07 1.96 36.00 0.07 0.15 16 8 O -0.53 0.12 12.64 -35.23 -0.45 -0.32 16 9 Si 0.74 -1.19 30.40 -169.99 -5.17 -6.35 16 10 C -0.08 -0.09 8.13 -39.18 -0.32 -0.41 16 11 C -0.14 -0.32 5.87 -104.97 -0.62 -0.94 16 12 C 0.56 1.50 7.70 -12.33 -0.09 1.41 16 13 O -0.52 -2.70 13.36 5.32 0.07 -2.63 16 14 N -0.73 0.04 5.51 -61.25 -0.34 -0.30 16 15 C 0.14 -0.16 5.35 -4.04 -0.02 -0.18 16 16 C -0.12 0.33 3.94 -89.81 -0.35 -0.03 16 17 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 18 C -0.11 0.37 7.16 -25.92 -0.19 0.19 16 19 C -0.61 1.93 3.82 -25.93 -0.10 1.83 16 20 H 0.15 -0.78 7.72 -51.93 -0.40 -1.18 16 21 S 2.42 -2.60 5.34 -107.50 -0.57 -3.17 16 22 C -0.65 2.40 10.62 101.05 1.07 3.47 16 23 O -0.94 -3.05 18.10 -57.83 -1.05 -4.10 16 24 O -0.94 -2.17 17.20 -57.83 -0.99 -3.17 16 25 C -0.09 0.24 7.26 -25.92 -0.19 0.05 16 26 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 27 H 0.06 0.00 8.04 -51.93 -0.42 -0.42 16 28 H 0.10 0.32 5.87 -51.93 -0.30 0.01 16 29 H 0.14 -0.21 8.06 -52.49 -0.42 -0.63 16 30 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.08 -0.27 8.08 -51.93 -0.42 -0.69 16 32 H 0.07 -0.27 4.96 -51.93 -0.26 -0.53 16 33 H 0.08 -0.19 7.37 -51.93 -0.38 -0.57 16 34 H 0.36 -0.98 6.84 45.56 0.31 -0.67 16 35 H -0.25 -0.03 6.81 56.52 0.38 0.35 16 36 H -0.25 0.09 7.11 56.52 0.40 0.49 16 37 H 0.12 -0.01 3.32 -52.48 -0.17 -0.18 16 38 H 0.40 -0.67 6.55 -40.82 -0.27 -0.93 16 39 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.08 -0.07 7.39 -51.93 -0.38 -0.46 16 41 H 0.09 -0.36 8.10 -51.93 -0.42 -0.78 16 42 H 0.11 -0.36 7.37 -51.93 -0.38 -0.75 16 43 H 0.13 -0.66 8.14 -51.92 -0.42 -1.08 16 44 H 0.13 -0.47 8.14 -51.92 -0.42 -0.89 16 45 H 0.13 -0.68 8.14 -51.92 -0.42 -1.10 16 46 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 47 H 0.09 -0.28 8.10 -51.93 -0.42 -0.70 16 LS Contribution 385.47 15.07 5.81 5.81 Total: 0.00 -11.91 385.47 -11.86 -23.77 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -6.94 Total: -13.58 kcal Atomic # 6 Polarization: 6.29 SS G_CDS: -2.24 Total: 4.05 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.34 Total: -0.30 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -2.42 Total: -10.22 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.17 Total: -6.35 kcal Atomic # 16 Polarization: -2.60 SS G_CDS: -0.57 Total: -3.17 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.91 -11.86 -23.77 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_9599494.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.651 kcal (2) G-P(sol) polarization free energy of solvation -11.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.559 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.859 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.768 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.419 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds