Wall clock time and date at job start Tue Mar 9 2021 13:14:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 O 1.42103 * 108.57745 * 2 1 4 4 O 1.42098 * 108.57970 * 228.97607 * 2 1 3 5 5 C 1.81401 * 101.92103 * 114.48820 * 2 1 3 6 6 H 1.08989 * 112.85135 * 53.80455 * 5 2 1 7 7 C 1.53784 * 113.61260 * 185.00143 * 5 2 1 8 8 C 1.53781 * 87.08054 * 139.98005 * 7 5 2 9 9 H 1.08999 * 113.61454 * 219.93063 * 8 7 5 10 10 C 1.53004 * 113.61155 * 89.11559 * 8 7 5 11 11 N 1.46505 * 109.46797 * 174.99898 * 10 8 7 12 12 C 1.34772 * 120.00009 * 179.97438 * 11 10 8 13 13 O 1.21285 * 119.99913 * 0.02562 * 12 11 10 14 14 C 1.50699 * 120.00186 * 179.97438 * 12 11 10 15 15 N 1.46501 * 109.47261 * 180.02562 * 14 12 11 16 16 C 1.36835 * 125.05899 * 264.97546 * 15 14 12 17 17 C 1.34235 * 109.93739 * 180.02562 * 16 15 14 18 18 C 1.50705 * 126.50377 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.46913 * 105.02681 * 18 17 16 20 20 Si 1.86296 * 109.46774 * 345.02914 * 18 17 16 21 21 C 1.46493 * 106.99829 * 0.02562 * 17 16 15 22 22 C 1.39595 * 134.03482 * 179.97438 * 21 17 16 23 23 C 1.36654 * 119.76204 * 180.02562 * 22 21 17 24 24 C 1.38793 * 120.53129 * 359.97438 * 23 22 21 25 25 C 1.37790 * 120.66437 * 359.97438 * 24 23 22 26 26 C 1.37693 * 125.06582 * 84.99837 * 15 14 12 27 27 C 1.53773 * 87.08083 * 334.56694 * 8 7 5 28 28 H 1.09008 * 109.47365 * 305.51168 * 1 2 3 29 29 H 1.09004 * 109.47543 * 65.51320 * 1 2 3 30 30 H 1.08995 * 109.47190 * 185.51286 * 1 2 3 31 31 H 1.08998 * 113.61373 * 25.43177 * 7 5 2 32 32 H 1.09005 * 113.68956 * 254.54054 * 7 5 2 33 33 H 1.08994 * 109.47337 * 55.00186 * 10 8 7 34 34 H 1.08995 * 109.47041 * 294.99956 * 10 8 7 35 35 H 0.97002 * 120.00234 * 359.97438 * 11 10 8 36 36 H 1.08998 * 109.47188 * 60.00121 * 14 12 11 37 37 H 1.09003 * 109.47100 * 300.00254 * 14 12 11 38 38 H 1.07997 * 125.03657 * 359.76382 * 16 15 14 39 39 H 1.08999 * 109.47175 * 225.02858 * 18 17 16 40 40 H 0.96700 * 114.00224 * 299.99919 * 19 18 17 41 41 H 1.48503 * 110.00062 * 179.97438 * 20 18 17 42 42 H 1.48504 * 110.00109 * 301.31800 * 20 18 17 43 43 H 1.07999 * 120.11544 * 0.02562 * 22 21 17 44 44 H 1.08006 * 119.73833 * 180.02562 * 23 22 21 45 45 H 1.07997 * 119.66704 * 179.97438 * 24 23 22 46 46 H 1.08002 * 120.10827 * 179.97438 * 25 24 23 47 47 H 1.08998 * 113.61317 * 139.98210 * 27 8 7 48 48 H 1.09004 * 113.61222 * 270.88050 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8841 -1.0162 5 6 2.1887 -0.7357 1.6152 6 1 1.6958 -1.6957 1.7676 7 6 3.6894 -0.7535 1.9508 8 6 3.2921 -0.3793 3.3885 9 1 3.9586 0.3493 3.8500 10 6 3.0232 -1.5898 4.2848 11 7 2.7711 -1.1364 5.6549 12 6 2.5080 -2.0350 6.6243 13 8 2.4805 -3.2189 6.3626 14 6 2.2493 -1.5687 8.0338 15 7 1.9916 -2.7277 8.8921 16 6 0.7515 -3.2143 9.2044 17 6 0.8681 -4.2814 10.0103 18 6 -0.2602 -5.1027 10.5793 19 8 -0.3416 -6.3476 9.8824 20 14 -1.8638 -4.1751 10.3831 21 6 2.3001 -4.4956 10.2329 22 6 3.0399 -5.4265 10.9641 23 6 4.4045 -5.3549 10.9698 24 6 5.0615 -4.3639 10.2538 25 6 4.3509 -3.4356 9.5244 26 6 2.9613 -3.4893 9.5050 27 6 2.0177 0.2403 2.7913 28 1 -0.3634 0.5970 0.8366 29 1 -0.3634 0.4260 -0.9352 30 1 -0.3633 -1.0229 0.0987 31 1 4.2603 0.0217 1.4397 32 1 4.1453 -1.7401 1.8665 33 1 3.8907 -2.2496 4.2743 34 1 2.1517 -2.1296 3.9145 35 1 2.7935 -0.1896 5.8644 36 1 1.3822 -0.9083 8.0447 37 1 3.1213 -1.0296 8.4041 38 1 -0.1830 -2.7986 8.8576 39 1 -0.0757 -5.2899 11.6372 40 1 -0.5048 -6.2572 8.9335 41 1 -2.9845 -4.9746 10.9398 42 1 -1.7806 -2.8646 11.0767 43 1 2.5354 -6.2006 11.5234 44 1 4.9765 -6.0756 11.5354 45 1 6.1405 -4.3200 10.2684 46 1 4.8714 -2.6680 8.9708 47 1 1.1227 0.0555 3.3853 48 1 2.1316 1.2872 2.5100 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17836384_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:40 Heat of formation + Delta-G solvation = -31.055706 kcal Electronic energy + Delta-G solvation = -32039.252284 eV Core-core repulsion = 27576.321469 eV Total energy + Delta-G solvation = -4462.930815 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.133 amu Computer time = 3.72 seconds Orbital eigenvalues (eV) -42.52140 -41.18425 -40.08306 -38.04996 -38.01198 -37.54666 -37.09227 -35.68765 -34.08526 -31.57918 -30.79402 -30.17135 -29.98633 -28.44171 -27.20073 -25.98552 -25.10685 -23.63270 -22.63022 -21.84633 -20.81810 -20.53271 -19.88594 -18.72144 -18.54954 -18.41848 -17.73587 -17.32364 -17.31000 -17.08118 -16.76210 -16.57375 -16.36545 -16.18364 -15.86135 -15.44275 -15.33917 -15.13379 -14.78022 -14.63117 -14.47731 -14.39386 -14.32220 -14.20001 -13.98848 -13.97447 -13.68868 -13.53889 -13.38502 -13.20380 -13.08190 -12.93693 -12.62903 -12.48331 -12.14725 -12.14183 -12.04376 -11.99784 -11.93197 -11.70632 -11.32331 -11.10884 -10.45663 -10.37640 -10.23935 -9.05791 -8.56295 -5.05042 -1.12793 0.24507 0.76010 1.31173 1.34933 1.36430 1.57982 1.64242 1.69495 2.00439 2.02126 2.38688 2.64520 2.96179 3.06724 3.11889 3.17666 3.25457 3.42873 3.44621 3.62416 3.69338 3.72728 3.74923 3.76591 3.82337 3.90498 4.04548 4.05688 4.22780 4.24112 4.28468 4.33765 4.44920 4.49083 4.54288 4.54865 4.55130 4.63352 4.68350 4.75987 4.87068 4.87351 4.95603 5.10484 5.22341 5.61524 5.77502 5.82917 5.86833 6.06760 6.25920 6.32815 6.75297 6.90928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.654 4.654 2 S 2.423 3.577 3 O -0.936 6.936 4 O -0.938 6.938 5 C -0.609 4.609 6 H 0.154 0.846 7 C -0.098 4.098 8 C -0.114 4.114 9 H 0.097 0.903 10 C 0.136 3.864 11 N -0.728 5.728 12 C 0.490 3.510 13 O -0.512 6.512 14 C 0.092 3.908 15 N -0.467 5.467 16 C 0.068 3.932 17 C -0.197 4.197 18 C -0.030 4.030 19 O -0.542 6.542 20 Si 0.682 3.318 21 C -0.087 4.087 22 C -0.066 4.066 23 C -0.145 4.145 24 C -0.096 4.096 25 C -0.128 4.128 26 C 0.108 3.892 27 C -0.111 4.111 28 H 0.129 0.871 29 H 0.130 0.870 30 H 0.128 0.872 31 H 0.102 0.898 32 H 0.093 0.907 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.403 0.597 36 H 0.123 0.877 37 H 0.118 0.882 38 H 0.171 0.829 39 H 0.110 0.890 40 H 0.377 0.623 41 H -0.254 1.254 42 H -0.256 1.256 43 H 0.122 0.878 44 H 0.123 0.877 45 H 0.125 0.875 46 H 0.115 0.885 47 H 0.088 0.912 48 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.245 5.842 0.008 6.259 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.605 3.395 3 O -0.933 6.933 4 O -0.935 6.935 5 C -0.718 4.718 6 H 0.172 0.828 7 C -0.136 4.136 8 C -0.134 4.134 9 H 0.115 0.885 10 C 0.013 3.987 11 N -0.382 5.382 12 C 0.274 3.726 13 O -0.385 6.385 14 C -0.034 4.034 15 N -0.150 5.150 16 C -0.057 4.057 17 C -0.205 4.205 18 C -0.141 4.141 19 O -0.347 6.347 20 Si 0.584 3.416 21 C -0.091 4.091 22 C -0.084 4.084 23 C -0.164 4.164 24 C -0.116 4.116 25 C -0.149 4.149 26 C 0.004 3.996 27 C -0.150 4.150 28 H 0.147 0.853 29 H 0.148 0.852 30 H 0.147 0.853 31 H 0.120 0.880 32 H 0.112 0.888 33 H 0.094 0.906 34 H 0.092 0.908 35 H 0.238 0.762 36 H 0.141 0.859 37 H 0.136 0.864 38 H 0.188 0.812 39 H 0.128 0.872 40 H 0.224 0.776 41 H -0.179 1.179 42 H -0.180 1.180 43 H 0.140 0.860 44 H 0.141 0.859 45 H 0.143 0.857 46 H 0.133 0.867 47 H 0.107 0.893 48 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -2.262 5.650 -0.048 6.086 hybrid contribution -0.079 0.078 0.782 0.790 sum -2.341 5.729 0.735 6.232 Atomic orbital electron populations 1.30232 1.26595 1.11666 1.11904 1.07816 0.78499 0.75865 0.77278 1.93611 1.79221 1.34158 1.86295 1.93619 1.79075 1.66985 1.53786 1.31775 1.07697 1.12223 1.20113 0.82841 1.22600 0.90719 1.04623 0.95701 1.22452 0.98126 0.97642 0.95165 0.88462 1.21183 1.02288 0.95369 0.79882 1.45920 1.73094 1.10297 1.08934 1.21016 0.77483 0.86872 0.87211 1.90829 1.48945 1.16293 1.82467 1.21577 1.05884 0.88004 0.87972 1.43193 1.04844 1.25932 1.41039 1.21494 0.87802 0.96625 0.99758 1.20654 0.93571 1.00007 1.06234 1.24336 1.03027 0.88946 0.97802 1.86494 1.95113 1.28046 1.25032 0.95284 0.76701 0.78902 0.90723 1.18947 0.92198 0.96910 1.01042 1.20312 0.93457 0.97121 0.97528 1.20677 0.94235 0.99798 1.01738 1.20832 0.99582 0.94522 0.96626 1.19952 0.89789 1.01768 1.03358 1.18160 0.90409 0.93567 0.97444 1.22836 0.99595 0.98299 0.94228 0.85280 0.85168 0.85292 0.87958 0.88792 0.90563 0.90776 0.76212 0.85893 0.86442 0.81229 0.87238 0.77573 1.17878 1.18035 0.85964 0.85914 0.85708 0.86746 0.89308 0.87276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 51. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 3.19 10.62 101.05 1.07 4.26 16 2 S 2.42 -5.23 5.30 -107.50 -0.57 -5.80 16 3 O -0.94 -1.20 17.34 -57.83 -1.00 -2.20 16 4 O -0.94 -2.33 18.10 -57.83 -1.05 -3.37 16 5 C -0.61 2.86 3.81 -25.92 -0.10 2.76 16 6 H 0.15 -0.99 7.72 -51.94 -0.40 -1.39 16 7 C -0.10 0.38 7.26 -25.92 -0.19 0.19 16 8 C -0.11 0.59 3.94 -89.81 -0.35 0.23 16 9 H 0.10 -0.58 8.14 -51.93 -0.42 -1.01 16 10 C 0.14 -0.50 5.35 -4.04 -0.02 -0.52 16 11 N -0.73 3.26 5.56 -60.29 -0.33 2.93 16 12 C 0.49 -0.71 7.90 -10.99 -0.09 -0.80 16 13 O -0.51 -1.92 16.42 5.55 0.09 -1.83 16 14 C 0.09 -0.32 6.48 -5.19 -0.03 -0.36 16 15 N -0.47 -0.23 2.27 -115.71 -0.26 -0.49 16 16 C 0.07 0.00 9.89 -16.73 -0.17 -0.16 16 17 C -0.20 -0.39 5.58 -102.71 -0.57 -0.97 16 18 C -0.03 -0.03 3.06 36.01 0.11 0.08 16 19 O -0.54 -1.10 12.88 -35.23 -0.45 -1.55 16 20 Si 0.68 -0.62 30.75 -169.99 -5.23 -5.85 16 21 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 22 C -0.07 -0.24 10.05 -39.65 -0.40 -0.63 16 23 C -0.15 -0.37 9.97 -39.95 -0.40 -0.77 16 24 C -0.10 -0.20 10.01 -39.54 -0.40 -0.59 16 25 C -0.13 -0.29 10.00 -39.43 -0.39 -0.68 16 26 C 0.11 0.33 6.80 -83.99 -0.57 -0.24 16 27 C -0.11 0.64 7.16 -25.92 -0.19 0.45 16 28 H 0.13 -0.87 8.14 -51.92 -0.42 -1.29 16 29 H 0.13 -0.60 8.14 -51.92 -0.42 -1.02 16 30 H 0.13 -0.81 8.14 -51.93 -0.42 -1.23 16 31 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 32 H 0.09 -0.38 8.10 -51.93 -0.42 -0.80 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 -0.22 7.39 -51.93 -0.38 -0.61 16 35 H 0.40 -3.04 8.47 -40.82 -0.35 -3.38 16 36 H 0.12 -0.86 8.12 -51.93 -0.42 -1.28 16 37 H 0.12 -0.63 8.14 -51.93 -0.42 -1.06 16 38 H 0.17 -0.62 6.34 -52.49 -0.33 -0.95 16 39 H 0.11 0.19 7.96 -51.93 -0.41 -0.22 16 40 H 0.38 -0.56 8.70 45.56 0.40 -0.17 16 41 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 42 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 43 H 0.12 0.34 8.06 -52.49 -0.42 -0.09 16 44 H 0.12 0.08 8.06 -52.48 -0.42 -0.34 16 45 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 46 H 0.11 0.02 8.06 -52.49 -0.42 -0.40 16 47 H 0.09 -0.62 8.10 -51.93 -0.42 -1.04 16 48 H 0.11 -0.61 7.48 -51.93 -0.39 -1.00 16 LS Contribution 414.63 15.07 6.25 6.25 Total: 0.00 -17.00 414.63 -12.89 -29.88 By element: Atomic # 1 Polarization: -12.22 SS G_CDS: -6.98 Total: -19.19 kcal Atomic # 6 Polarization: 4.59 SS G_CDS: -3.35 Total: 1.24 kcal Atomic # 7 Polarization: 3.03 SS G_CDS: -0.60 Total: 2.43 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -2.41 Total: -8.95 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.23 Total: -5.85 kcal Atomic # 16 Polarization: -5.23 SS G_CDS: -0.57 Total: -5.80 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -17.00 -12.89 -29.88 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17836384_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.172 kcal (2) G-P(sol) polarization free energy of solvation -16.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.884 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.72 seconds