Wall clock time and date at job start Tue Mar 9 2021 13:14:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42902 * 109.46855 * 2 1 4 4 C 1.35899 * 116.99974 * 275.04743 * 3 2 1 5 5 C 1.38725 * 120.05475 * 5.45406 * 4 3 2 6 6 C 1.38151 * 119.94427 * 180.25773 * 5 4 3 7 7 C 1.38271 * 120.05329 * 359.46555 * 6 5 4 8 8 C 1.50696 * 119.94449 * 180.23898 * 7 6 5 9 9 O 1.42903 * 109.46853 * 245.27381 * 8 7 6 10 10 Si 1.86304 * 109.47091 * 5.27374 * 8 7 6 11 11 C 1.38270 * 120.11042 * 0.51246 * 7 6 5 12 12 C 1.38149 * 120.05653 * 359.76722 * 11 7 6 13 13 C 1.50699 * 109.46821 * 119.99639 * 2 1 3 14 14 O 1.21283 * 119.99963 * 244.99962 * 13 2 1 15 15 N 1.34774 * 119.99849 * 65.00421 * 13 2 1 16 16 C 1.46506 * 120.00076 * 180.02562 * 15 13 2 17 17 C 1.53001 * 109.47163 * 180.02562 * 16 15 13 18 18 C 1.53000 * 109.46909 * 179.97438 * 17 16 15 19 19 H 1.09008 * 112.85127 * 316.19214 * 18 17 16 20 20 C 1.53778 * 113.61541 * 87.49802 * 18 17 16 21 21 C 1.53789 * 87.08027 * 139.98143 * 20 18 17 22 22 H 1.08994 * 113.69037 * 89.12850 * 21 20 18 23 23 O 1.42900 * 113.61247 * 220.02337 * 21 20 18 24 24 C 1.53781 * 113.61396 * 184.99969 * 18 17 16 25 25 H 1.09005 * 109.46961 * 60.00225 * 1 2 3 26 26 H 1.09002 * 109.46824 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.47529 * 300.00097 * 1 2 3 28 28 H 1.09000 * 109.47529 * 239.99903 * 2 1 3 29 29 H 1.07997 * 120.03251 * 359.97438 * 5 4 3 30 30 H 1.07998 * 119.97442 * 179.72148 * 6 5 4 31 31 H 1.08999 * 109.47568 * 125.27539 * 8 7 6 32 32 H 0.96703 * 114.00056 * 60.00038 * 9 8 7 33 33 H 1.48497 * 109.99655 * 58.68396 * 10 8 7 34 34 H 1.48501 * 109.99720 * 180.02562 * 10 8 7 35 35 H 1.08001 * 119.97258 * 179.74566 * 11 7 6 36 36 H 1.07999 * 120.03209 * 179.97438 * 12 11 7 37 37 H 0.96994 * 120.00059 * 359.97438 * 15 13 2 38 38 H 1.09010 * 109.46498 * 299.99699 * 16 15 13 39 39 H 1.09001 * 109.47341 * 59.99643 * 16 15 13 40 40 H 1.08998 * 109.46842 * 299.99611 * 17 16 15 41 41 H 1.08993 * 109.47195 * 59.99813 * 17 16 15 42 42 H 1.08992 * 113.61619 * 254.52556 * 20 18 17 43 43 H 1.08998 * 113.61342 * 25.43642 * 20 18 17 44 44 H 0.96701 * 113.99734 * 277.49299 * 23 21 20 45 45 H 1.09002 * 113.60916 * 334.56542 * 24 18 17 46 46 H 1.08999 * 113.61865 * 105.46709 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1115 1.9645 -1.2062 5 6 1.6581 1.3297 -2.3533 6 6 1.7710 1.9570 -3.5790 7 6 2.3253 3.2211 -3.6615 8 6 2.4423 3.9053 -4.9991 9 8 3.8226 4.0728 -5.3292 10 14 1.6136 2.8649 -6.3035 11 6 2.7775 3.8561 -2.5195 12 6 2.6721 3.2307 -1.2922 13 6 2.0323 -0.7103 1.2305 14 8 2.6529 -0.0978 2.0735 15 7 1.7919 -2.0263 1.3942 16 6 2.2796 -2.7168 2.5908 17 6 1.8756 -4.1912 2.5291 18 6 2.3855 -4.9124 3.7784 19 1 3.4095 -4.6409 4.0356 20 6 1.4122 -4.8483 4.9672 21 6 1.7857 -6.3129 5.2507 22 1 2.6449 -6.4257 5.9118 23 8 0.6744 -7.1216 5.6421 24 6 2.1372 -6.4299 3.7581 25 1 -0.3633 0.5138 -0.8901 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 1.8934 -0.5138 -0.8899 29 1 1.2214 0.3441 -2.2890 30 1 1.4223 1.4614 -4.4730 31 1 1.9591 4.8812 -4.9516 32 1 4.3162 3.2434 -5.3888 33 1 0.1851 2.6568 -5.9552 34 1 1.7226 3.5285 -7.6275 35 1 3.2138 4.8418 -2.5870 36 1 3.0258 3.7268 -0.4005 37 1 1.2953 -2.5161 0.7202 38 1 3.3660 -2.6398 2.6371 39 1 1.8446 -2.2572 3.4782 40 1 0.7893 -4.2686 2.4824 41 1 2.3110 -4.6505 1.6417 42 1 1.7250 -4.1584 5.7509 43 1 0.3716 -4.7122 4.6726 44 1 0.4485 -7.0522 6.5797 45 1 1.2948 -6.7261 3.1330 46 1 3.0353 -7.0168 3.5658 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:50 Heat of formation + Delta-G solvation = -103.786399 kcal Electronic energy + Delta-G solvation = -26307.876610 eV Core-core repulsion = 22358.281660 eV Total energy + Delta-G solvation = -3949.594950 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.77206 -40.75692 -40.32011 -39.03865 -37.19018 -36.81516 -35.67663 -33.65871 -32.06312 -31.69066 -31.10291 -26.91131 -26.78516 -26.21413 -24.96727 -23.96675 -22.76948 -22.39198 -21.39343 -20.56387 -19.54795 -18.73614 -18.43750 -18.05564 -17.12869 -17.00418 -16.82129 -16.55610 -16.37666 -16.07160 -15.86145 -15.68947 -15.43290 -15.26901 -14.91518 -14.66294 -14.45668 -14.21482 -14.09907 -13.74176 -13.55182 -13.50897 -13.44138 -13.38314 -12.95628 -12.80727 -12.58587 -12.23214 -12.12691 -12.07781 -12.02153 -11.80716 -11.72069 -11.32229 -10.89076 -10.73094 -10.41563 -10.22298 -10.05098 -9.21134 -5.06549 0.27995 0.28668 1.28703 1.45756 1.48014 1.61080 1.96082 2.44579 2.65132 3.14146 3.34402 3.38899 3.47454 3.48266 3.53929 3.65050 3.65916 3.69776 3.81272 3.85162 3.85879 3.95352 4.13381 4.19875 4.22147 4.27409 4.39706 4.43501 4.47952 4.50914 4.55843 4.64968 4.69804 4.71212 4.81061 4.85471 4.88346 4.94354 4.97186 5.11534 5.15636 5.24179 5.25615 5.33135 5.49797 5.67867 6.21159 6.36706 6.58288 6.64404 7.06862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.284 6.284 4 C 0.136 3.864 5 C -0.209 4.209 6 C -0.074 4.074 7 C -0.158 4.158 8 C -0.063 4.063 9 O -0.541 6.541 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.146 4.146 13 C 0.518 3.482 14 O -0.512 6.512 15 N -0.727 5.727 16 C 0.120 3.880 17 C -0.119 4.119 18 C -0.107 4.107 19 H 0.097 0.903 20 C -0.167 4.167 21 C 0.073 3.927 22 H 0.082 0.918 23 O -0.561 6.561 24 C -0.124 4.124 25 H 0.078 0.922 26 H 0.080 0.920 27 H 0.077 0.923 28 H 0.101 0.899 29 H 0.133 0.867 30 H 0.130 0.870 31 H 0.112 0.888 32 H 0.379 0.621 33 H -0.258 1.258 34 H -0.255 1.255 35 H 0.134 0.866 36 H 0.135 0.865 37 H 0.402 0.598 38 H 0.071 0.929 39 H 0.071 0.929 40 H 0.073 0.927 41 H 0.074 0.926 42 H 0.070 0.930 43 H 0.090 0.910 44 H 0.379 0.621 45 H 0.091 0.909 46 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.135 -5.814 -1.187 6.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.227 4.227 6 C -0.092 4.092 7 C -0.159 4.159 8 C -0.174 4.174 9 O -0.346 6.346 10 Si 0.586 3.414 11 C -0.069 4.069 12 C -0.165 4.165 13 C 0.302 3.698 14 O -0.385 6.385 15 N -0.382 5.382 16 C -0.003 4.003 17 C -0.157 4.157 18 C -0.126 4.126 19 H 0.116 0.884 20 C -0.205 4.205 21 C 0.014 3.986 22 H 0.100 0.900 23 O -0.367 6.367 24 C -0.162 4.162 25 H 0.097 0.903 26 H 0.098 0.902 27 H 0.096 0.904 28 H 0.119 0.881 29 H 0.151 0.849 30 H 0.147 0.853 31 H 0.130 0.870 32 H 0.226 0.774 33 H -0.183 1.183 34 H -0.180 1.180 35 H 0.152 0.848 36 H 0.153 0.847 37 H 0.236 0.764 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.092 0.908 41 H 0.093 0.907 42 H 0.089 0.911 43 H 0.109 0.891 44 H 0.227 0.773 45 H 0.110 0.890 46 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.424 -4.855 -1.600 5.306 hybrid contribution -0.398 0.222 0.655 0.798 sum -1.822 -4.632 -0.945 5.067 Atomic orbital electron populations 1.22359 0.92290 1.03953 1.04912 1.22197 0.95935 0.83241 0.98006 1.86234 1.80873 1.25472 1.27013 1.19088 0.95086 0.92840 0.83973 1.21208 1.07236 1.01881 0.92386 1.20762 0.97499 0.93969 0.96921 1.20246 1.03605 0.95704 0.96300 1.24978 0.88573 1.05550 0.98315 1.86508 1.20068 1.35715 1.92337 0.94879 0.81317 0.87235 0.77968 1.20864 0.95941 0.99564 0.90488 1.20548 1.03275 0.93613 0.99032 1.20076 0.80085 0.82170 0.87505 1.90782 1.38728 1.65650 1.43378 1.45866 1.58665 1.08973 1.24661 1.21426 0.99916 0.91605 0.87306 1.21748 1.01797 0.93529 0.98591 1.22243 0.99978 0.95463 0.94914 0.88436 1.23794 1.00430 0.97714 0.98513 1.23350 0.89119 0.89778 0.96325 0.89995 1.86528 1.50578 1.68444 1.31140 1.23123 1.02244 0.95567 0.95254 0.90262 0.90158 0.90441 0.88139 0.84897 0.85311 0.87018 0.77412 1.18302 1.17977 0.84832 0.84669 0.76390 0.91097 0.91067 0.90805 0.90712 0.91077 0.89110 0.77324 0.89022 0.90636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.43 9.13 37.16 0.34 0.77 16 2 C 0.07 -0.03 2.64 -27.88 -0.07 -0.10 16 3 O -0.28 -0.84 9.34 -39.28 -0.37 -1.21 16 4 C 0.14 0.24 6.60 -39.22 -0.26 -0.02 16 5 C -0.21 0.08 8.24 -39.43 -0.33 -0.24 16 6 C -0.07 0.05 8.66 -39.60 -0.34 -0.29 16 7 C -0.16 -0.04 5.35 -104.60 -0.56 -0.60 16 8 C -0.06 0.01 2.80 36.00 0.10 0.11 16 9 O -0.54 -0.22 12.83 -35.23 -0.45 -0.67 16 10 Si 0.68 -0.80 29.80 -169.99 -5.07 -5.86 16 11 C -0.05 -0.05 9.68 -39.60 -0.38 -0.44 16 12 C -0.15 -0.27 9.99 -39.43 -0.39 -0.67 16 13 C 0.52 0.83 7.18 -10.99 -0.08 0.75 16 14 O -0.51 -3.40 16.51 -14.31 -0.24 -3.64 16 15 N -0.73 1.32 5.52 -60.29 -0.33 0.98 16 16 C 0.12 -0.18 5.67 -4.04 -0.02 -0.20 16 17 C -0.12 0.39 5.16 -26.73 -0.14 0.26 16 18 C -0.11 0.27 3.65 -89.81 -0.33 -0.06 16 19 H 0.10 -0.27 8.13 -51.92 -0.42 -0.69 16 20 C -0.17 0.30 7.46 -25.92 -0.19 0.11 16 21 C 0.07 -0.08 5.21 -25.91 -0.14 -0.22 16 22 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 23 O -0.56 -0.20 13.67 -35.23 -0.48 -0.68 16 24 C -0.12 0.19 7.47 -25.92 -0.19 0.00 16 25 H 0.08 -0.21 6.91 -51.93 -0.36 -0.57 16 26 H 0.08 -0.39 7.92 -51.93 -0.41 -0.80 16 27 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.10 -0.30 6.31 -51.93 -0.33 -0.63 16 29 H 0.13 -0.39 5.43 -52.49 -0.28 -0.68 16 30 H 0.13 -0.38 4.91 -52.49 -0.26 -0.64 16 31 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 32 H 0.38 -1.30 8.70 45.56 0.40 -0.90 16 33 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 34 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 35 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 36 H 0.14 0.20 8.06 -52.49 -0.42 -0.22 16 37 H 0.40 -2.00 8.25 -40.82 -0.34 -2.34 16 38 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.07 -0.26 7.84 -51.93 -0.41 -0.66 16 41 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 44 H 0.38 -1.33 9.12 45.56 0.42 -0.92 16 45 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 46 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 LS Contribution 377.36 15.07 5.69 5.69 Total: 0.00 -10.46 377.36 -10.48 -20.93 By element: Atomic # 1 Polarization: -8.47 SS G_CDS: -6.24 Total: -14.71 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -2.99 Total: -0.84 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.33 Total: 0.98 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -1.54 Total: -6.20 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.07 Total: -5.86 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -10.46 -10.48 -20.93 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.852 kcal (2) G-P(sol) polarization free energy of solvation -10.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.934 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds