Wall clock time and date at job start Tue Mar 9 2021 13:14:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42902 * 109.46855 * 2 1 4 4 C 1.35899 * 116.99974 * 275.04743 * 3 2 1 5 5 C 1.38725 * 120.05475 * 5.45406 * 4 3 2 6 6 C 1.38151 * 119.94427 * 180.25773 * 5 4 3 7 7 C 1.38271 * 120.05329 * 359.46555 * 6 5 4 8 8 C 1.50696 * 119.94449 * 180.23898 * 7 6 5 9 9 O 1.42903 * 109.46853 * 245.27381 * 8 7 6 10 10 Si 1.86304 * 109.47091 * 5.27374 * 8 7 6 11 11 C 1.38270 * 120.11042 * 0.51246 * 7 6 5 12 12 C 1.38149 * 120.05653 * 359.76722 * 11 7 6 13 13 C 1.50699 * 109.46821 * 119.99639 * 2 1 3 14 14 O 1.21283 * 119.99963 * 244.99962 * 13 2 1 15 15 N 1.34774 * 119.99849 * 65.00421 * 13 2 1 16 16 C 1.46506 * 120.00076 * 180.02562 * 15 13 2 17 17 C 1.53001 * 109.47163 * 180.02562 * 16 15 13 18 18 C 1.53000 * 109.46909 * 179.97438 * 17 16 15 19 19 H 1.09008 * 112.85127 * 316.19214 * 18 17 16 20 20 C 1.53778 * 113.61541 * 87.49802 * 18 17 16 21 21 C 1.53789 * 87.08027 * 139.98143 * 20 18 17 22 22 H 1.08994 * 113.69037 * 89.12850 * 21 20 18 23 23 O 1.42900 * 113.61247 * 220.02337 * 21 20 18 24 24 C 1.53781 * 113.61396 * 184.99969 * 18 17 16 25 25 H 1.09005 * 109.46961 * 60.00225 * 1 2 3 26 26 H 1.09002 * 109.46824 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.47529 * 300.00097 * 1 2 3 28 28 H 1.09000 * 109.47529 * 239.99903 * 2 1 3 29 29 H 1.07997 * 120.03251 * 359.97438 * 5 4 3 30 30 H 1.07998 * 119.97442 * 179.72148 * 6 5 4 31 31 H 1.08999 * 109.47568 * 125.27539 * 8 7 6 32 32 H 0.96703 * 114.00056 * 60.00038 * 9 8 7 33 33 H 1.48497 * 109.99655 * 58.68396 * 10 8 7 34 34 H 1.48501 * 109.99720 * 180.02562 * 10 8 7 35 35 H 1.08001 * 119.97258 * 179.74566 * 11 7 6 36 36 H 1.07999 * 120.03209 * 179.97438 * 12 11 7 37 37 H 0.96994 * 120.00059 * 359.97438 * 15 13 2 38 38 H 1.09010 * 109.46498 * 299.99699 * 16 15 13 39 39 H 1.09001 * 109.47341 * 59.99643 * 16 15 13 40 40 H 1.08998 * 109.46842 * 299.99611 * 17 16 15 41 41 H 1.08993 * 109.47195 * 59.99813 * 17 16 15 42 42 H 1.08992 * 113.61619 * 254.52556 * 20 18 17 43 43 H 1.08998 * 113.61342 * 25.43642 * 20 18 17 44 44 H 0.96701 * 113.99734 * 277.49299 * 23 21 20 45 45 H 1.09002 * 113.60916 * 334.56542 * 24 18 17 46 46 H 1.08999 * 113.61865 * 105.46709 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1115 1.9645 -1.2062 5 6 1.6581 1.3297 -2.3533 6 6 1.7710 1.9570 -3.5790 7 6 2.3253 3.2211 -3.6615 8 6 2.4423 3.9053 -4.9991 9 8 3.8226 4.0728 -5.3292 10 14 1.6136 2.8649 -6.3035 11 6 2.7775 3.8561 -2.5195 12 6 2.6721 3.2307 -1.2922 13 6 2.0323 -0.7103 1.2305 14 8 2.6529 -0.0978 2.0735 15 7 1.7919 -2.0263 1.3942 16 6 2.2796 -2.7168 2.5908 17 6 1.8756 -4.1912 2.5291 18 6 2.3855 -4.9124 3.7784 19 1 3.4095 -4.6409 4.0356 20 6 1.4122 -4.8483 4.9672 21 6 1.7857 -6.3129 5.2507 22 1 2.6449 -6.4257 5.9118 23 8 0.6744 -7.1216 5.6421 24 6 2.1372 -6.4299 3.7581 25 1 -0.3633 0.5138 -0.8901 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 1.8934 -0.5138 -0.8899 29 1 1.2214 0.3441 -2.2890 30 1 1.4223 1.4614 -4.4730 31 1 1.9591 4.8812 -4.9516 32 1 4.3162 3.2434 -5.3888 33 1 0.1851 2.6568 -5.9552 34 1 1.7226 3.5285 -7.6275 35 1 3.2138 4.8418 -2.5870 36 1 3.0258 3.7268 -0.4005 37 1 1.2953 -2.5161 0.7202 38 1 3.3660 -2.6398 2.6371 39 1 1.8446 -2.2572 3.4782 40 1 0.7893 -4.2686 2.4824 41 1 2.3110 -4.6505 1.6417 42 1 1.7250 -4.1584 5.7509 43 1 0.3716 -4.7122 4.6726 44 1 0.4485 -7.0522 6.5797 45 1 1.2948 -6.7261 3.1330 46 1 3.0353 -7.0168 3.5658 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:49 Heat of formation + Delta-G solvation = -106.937339 kcal Electronic energy + Delta-G solvation = -26308.013245 eV Core-core repulsion = 22358.281660 eV Total energy + Delta-G solvation = -3949.731585 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.80108 -40.73452 -40.26132 -39.06789 -37.18113 -36.80550 -35.68554 -33.59832 -32.04849 -31.67771 -30.99889 -26.82179 -26.67798 -26.15990 -24.87886 -23.95739 -22.64039 -22.40493 -21.39581 -20.42203 -19.53308 -18.72072 -18.37258 -18.04201 -17.17082 -16.98367 -16.79814 -16.48098 -16.34188 -16.01244 -15.83112 -15.66646 -15.35167 -15.25752 -14.91894 -14.63820 -14.45392 -14.16482 -14.09108 -13.70641 -13.49076 -13.38440 -13.32314 -13.26497 -12.89270 -12.68551 -12.46671 -12.25397 -12.07088 -12.03373 -11.96201 -11.71381 -11.64316 -11.16906 -10.96118 -10.65254 -10.39777 -10.23518 -10.05415 -9.23849 -4.98721 0.25769 0.28784 1.34365 1.39667 1.49928 1.66023 1.99709 2.49226 2.63985 3.30400 3.46864 3.52864 3.56965 3.64197 3.66529 3.72392 3.80985 3.82034 3.87078 3.93782 4.01147 4.10791 4.26595 4.28288 4.35574 4.39480 4.48722 4.57468 4.61295 4.62663 4.69625 4.70384 4.82655 4.85677 4.95645 4.96480 5.02165 5.07943 5.13669 5.17257 5.24297 5.27649 5.31950 5.48543 5.50678 5.68791 6.24981 6.44367 6.79808 6.87130 7.08198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.064 3.936 3 O -0.315 6.315 4 C 0.121 3.879 5 C -0.202 4.202 6 C -0.072 4.072 7 C -0.161 4.161 8 C -0.074 4.074 9 O -0.559 6.559 10 Si 0.782 3.218 11 C -0.060 4.060 12 C -0.168 4.168 13 C 0.513 3.487 14 O -0.574 6.574 15 N -0.708 5.708 16 C 0.121 3.879 17 C -0.107 4.107 18 C -0.102 4.102 19 H 0.100 0.900 20 C -0.166 4.166 21 C 0.065 3.935 22 H 0.091 0.909 23 O -0.583 6.583 24 C -0.126 4.126 25 H 0.087 0.913 26 H 0.111 0.889 27 H 0.055 0.945 28 H 0.133 0.867 29 H 0.164 0.836 30 H 0.157 0.843 31 H 0.102 0.898 32 H 0.395 0.605 33 H -0.281 1.281 34 H -0.303 1.303 35 H 0.132 0.868 36 H 0.125 0.875 37 H 0.421 0.579 38 H 0.059 0.941 39 H 0.055 0.945 40 H 0.080 0.920 41 H 0.089 0.911 42 H 0.070 0.930 43 H 0.085 0.915 44 H 0.393 0.607 45 H 0.086 0.914 46 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.891 -7.692 -2.675 8.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.005 3.995 3 O -0.228 6.228 4 C 0.076 3.924 5 C -0.220 4.220 6 C -0.089 4.089 7 C -0.162 4.162 8 C -0.183 4.183 9 O -0.367 6.367 10 Si 0.688 3.312 11 C -0.078 4.078 12 C -0.186 4.186 13 C 0.299 3.701 14 O -0.452 6.452 15 N -0.362 5.362 16 C -0.002 4.002 17 C -0.145 4.145 18 C -0.121 4.121 19 H 0.118 0.882 20 C -0.203 4.203 21 C 0.006 3.994 22 H 0.108 0.892 23 O -0.392 6.392 24 C -0.164 4.164 25 H 0.106 0.894 26 H 0.130 0.870 27 H 0.075 0.925 28 H 0.150 0.850 29 H 0.181 0.819 30 H 0.174 0.826 31 H 0.120 0.880 32 H 0.245 0.755 33 H -0.208 1.208 34 H -0.232 1.232 35 H 0.150 0.850 36 H 0.143 0.857 37 H 0.259 0.741 38 H 0.078 0.922 39 H 0.074 0.926 40 H 0.099 0.901 41 H 0.107 0.893 42 H 0.089 0.911 43 H 0.103 0.897 44 H 0.242 0.758 45 H 0.104 0.896 46 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -2.185 -6.782 -3.078 7.762 hybrid contribution -0.158 0.819 1.133 1.407 sum -2.343 -5.964 -1.945 6.696 Atomic orbital electron populations 1.22380 0.90573 1.05794 1.04293 1.22450 0.97104 0.82067 0.97922 1.86198 1.81456 1.27177 1.28001 1.19247 0.95787 0.92941 0.84473 1.21507 1.06184 1.02876 0.91435 1.21064 0.96535 0.93429 0.97881 1.20365 1.03565 0.96284 0.95990 1.25204 0.88644 1.05619 0.98880 1.86470 1.20496 1.37406 1.92327 0.93798 0.78499 0.85336 0.73601 1.20917 0.96488 0.99749 0.90697 1.20621 1.04441 0.94471 0.99089 1.20586 0.79168 0.82849 0.87522 1.90754 1.41745 1.67119 1.45592 1.45740 1.57608 1.08035 1.24801 1.21388 0.99171 0.92705 0.86925 1.21668 1.02248 0.91828 0.98763 1.22220 0.99973 0.94947 0.94937 0.88156 1.23759 1.00288 0.97378 0.98924 1.23520 0.89118 0.89903 0.96813 0.89161 1.86482 1.51153 1.68910 1.32610 1.23130 1.02179 0.96126 0.94917 0.89396 0.87039 0.92537 0.84989 0.81873 0.82596 0.88033 0.75530 1.20803 1.23185 0.84991 0.85733 0.74136 0.92233 0.92615 0.90092 0.89288 0.91120 0.89673 0.75768 0.89581 0.90240 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.08 9.13 71.98 0.66 1.74 16 2 C 0.06 -0.10 2.64 29.85 0.08 -0.02 16 3 O -0.31 -2.18 9.34 -73.43 -0.69 -2.87 16 4 C 0.12 0.48 6.60 22.51 0.15 0.63 16 5 C -0.20 0.49 8.24 22.37 0.18 0.67 16 6 C -0.07 0.23 8.66 22.26 0.19 0.42 16 7 C -0.16 -0.04 5.35 -19.85 -0.11 -0.15 16 8 C -0.07 0.03 2.80 71.23 0.20 0.23 16 9 O -0.56 -0.42 12.83 -148.98 -1.91 -2.33 16 10 Si 0.78 -2.66 29.80 68.60 2.04 -0.62 16 11 C -0.06 -0.20 9.68 22.26 0.22 0.01 16 12 C -0.17 -0.93 9.99 22.37 0.22 -0.71 16 13 C 0.51 1.86 7.18 87.66 0.63 2.49 16 14 O -0.57 -8.88 16.51 15.95 0.26 -8.61 16 15 N -0.71 3.07 5.52 -463.03 -2.55 0.51 16 16 C 0.12 -0.34 5.67 86.38 0.49 0.14 16 17 C -0.11 0.82 5.16 30.59 0.16 0.98 16 18 C -0.10 0.55 3.65 -10.27 -0.04 0.52 16 19 H 0.10 -0.58 8.13 -2.38 -0.02 -0.60 16 20 C -0.17 0.58 7.46 31.12 0.23 0.81 16 21 C 0.07 -0.15 5.21 31.12 0.16 0.02 16 22 H 0.09 -0.40 8.14 -2.39 -0.02 -0.41 16 23 O -0.58 -0.50 13.67 -148.98 -2.04 -2.53 16 24 C -0.13 0.44 7.47 31.12 0.23 0.67 16 25 H 0.09 -0.66 6.91 -2.38 -0.02 -0.68 16 26 H 0.11 -1.43 7.92 -2.39 -0.02 -1.44 16 27 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 28 H 0.13 -1.12 6.31 -2.39 -0.02 -1.13 16 29 H 0.16 -1.52 5.43 -2.91 -0.02 -1.53 16 30 H 0.16 -1.41 4.91 -2.91 -0.01 -1.43 16 31 H 0.10 0.12 7.96 -2.39 -0.02 0.10 16 32 H 0.39 -2.96 8.70 -74.06 -0.64 -3.61 16 33 H -0.28 -0.16 7.11 99.48 0.71 0.54 16 34 H -0.30 -1.45 7.11 99.48 0.71 -0.74 16 35 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 36 H 0.12 0.78 8.06 -2.91 -0.02 0.76 16 37 H 0.42 -5.12 8.25 -92.71 -0.77 -5.89 16 38 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 39 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 40 H 0.08 -0.68 7.84 -2.39 -0.02 -0.70 16 41 H 0.09 -0.88 8.14 -2.39 -0.02 -0.89 16 42 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 43 H 0.08 -0.20 7.90 -2.39 -0.02 -0.21 16 44 H 0.39 -2.64 9.12 -74.06 -0.68 -3.32 16 45 H 0.09 -0.19 8.10 -2.39 -0.02 -0.21 16 46 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 Total: 0.00 -27.55 377.36 -2.25 -29.80 By element: Atomic # 1 Polarization: -20.79 SS G_CDS: -1.03 Total: -21.82 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: 3.66 Total: 8.46 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -2.55 Total: 0.51 kcal Atomic # 8 Polarization: -11.97 SS G_CDS: -4.37 Total: -16.34 kcal Atomic # 14 Polarization: -2.66 SS G_CDS: 2.04 Total: -0.62 kcal Total: -27.55 -2.25 -29.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.134 kcal (2) G-P(sol) polarization free energy of solvation -27.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.686 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.803 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.937 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds