Wall clock time and date at job start Tue Mar 9 2021 13:15:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35658 * 117.00276 * 2 1 4 4 C 1.38399 * 120.11756 * 0.02562 * 3 2 1 5 5 C 1.38729 * 120.03135 * 180.02562 * 4 3 2 6 6 O 1.35712 * 119.86184 * 179.97438 * 5 4 3 7 7 C 1.42893 * 117.00141 * 359.97438 * 6 5 4 8 8 C 1.39137 * 120.27238 * 0.02562 * 5 4 3 9 9 C 1.50699 * 119.88134 * 180.02562 * 8 5 4 10 10 O 1.42895 * 109.47235 * 74.99835 * 9 8 5 11 11 Si 1.86304 * 109.47475 * 194.99931 * 9 8 5 12 12 C 1.37586 * 120.24443 * 359.97438 * 8 5 4 13 13 C 1.39824 * 119.95854 * 359.74607 * 12 8 5 14 14 C 1.47309 * 120.13304 * 180.27371 * 13 12 8 15 15 O 1.21619 * 119.99515 * 180.27677 * 14 13 12 16 16 N 1.34774 * 120.00250 * 0.27842 * 14 13 12 17 17 C 1.46493 * 120.00168 * 180.02562 * 16 14 13 18 18 C 1.53005 * 109.47317 * 179.97438 * 17 16 14 19 19 C 1.52992 * 109.47093 * 179.97438 * 18 17 16 20 20 H 1.09003 * 112.85217 * 45.33301 * 19 18 17 21 21 C 1.53775 * 113.61545 * 176.52772 * 19 18 17 22 22 C 1.53781 * 87.08539 * 139.98181 * 21 19 18 23 23 H 1.08996 * 113.61574 * 89.11541 * 22 21 19 24 24 O 1.42897 * 113.61396 * 220.02191 * 22 21 19 25 25 C 1.53786 * 113.61728 * 274.13583 * 19 18 17 26 26 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46938 * 59.99682 * 1 2 3 28 28 H 1.09004 * 109.46926 * 299.99803 * 1 2 3 29 29 H 1.08001 * 119.98566 * 359.97438 * 4 3 2 30 30 H 1.08996 * 109.47682 * 300.00194 * 7 6 5 31 31 H 1.09000 * 109.47580 * 60.00361 * 7 6 5 32 32 H 1.09002 * 109.47256 * 180.02562 * 7 6 5 33 33 H 1.09000 * 109.47038 * 315.00123 * 9 8 5 34 34 H 0.96697 * 114.00335 * 60.00461 * 10 9 8 35 35 H 1.48492 * 110.00191 * 179.97438 * 11 9 8 36 36 H 1.48504 * 109.99643 * 301.31729 * 11 9 8 37 37 H 1.08000 * 120.02472 * 180.02562 * 12 8 5 38 38 H 0.97001 * 119.99814 * 359.97438 * 16 14 13 39 39 H 1.09008 * 109.46925 * 299.99653 * 17 16 14 40 40 H 1.08997 * 109.47607 * 59.99437 * 17 16 14 41 41 H 1.08991 * 109.46684 * 299.99783 * 18 17 16 42 42 H 1.09002 * 109.46669 * 59.99902 * 18 17 16 43 43 H 1.09008 * 113.61796 * 254.53067 * 21 19 18 44 44 H 1.09000 * 113.61391 * 25.43319 * 21 19 18 45 45 H 0.96706 * 114.00066 * 179.97438 * 24 22 21 46 46 H 1.08992 * 113.60998 * 334.56841 * 25 19 18 47 47 H 1.08998 * 113.61631 * 105.46823 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2087 0.0000 4 6 1.2936 2.3710 0.0005 5 6 1.9254 3.6061 0.0000 6 8 1.1852 4.7436 0.0000 7 6 -0.2357 4.5931 0.0000 8 6 3.3146 3.6833 -0.0016 9 6 3.9917 5.0297 -0.0016 10 8 3.8957 5.6111 1.3002 11 14 5.7859 4.8226 -0.4585 12 6 4.0725 2.5351 -0.0022 13 6 3.4462 1.2850 0.0043 14 6 4.2539 0.0531 0.0098 15 8 3.7065 -1.0329 0.0103 16 7 5.5995 0.1296 0.0143 17 6 6.4028 -1.0954 0.0193 18 6 7.8888 -0.7310 0.0231 19 6 8.7277 -2.0104 0.0289 20 1 8.3715 -2.7533 -0.6848 21 6 10.2418 -1.7546 -0.0522 22 6 10.4092 -2.8915 0.9697 23 1 10.5130 -3.8763 0.5143 24 8 11.4053 -2.6289 1.9601 25 6 8.9760 -2.5779 1.4365 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5138 0.8900 29 1 0.2150 2.3165 0.0005 30 1 -0.5430 4.0438 -0.8899 31 1 -0.5430 4.0439 0.8900 32 1 -0.7053 5.5767 -0.0005 33 1 3.5048 5.6812 -0.7273 34 1 4.3087 5.0841 1.9978 35 1 6.4647 6.1433 -0.4626 36 1 6.4534 3.9110 0.5053 37 1 5.1506 2.5992 -0.0030 38 1 6.0360 0.9958 0.0136 39 1 6.1692 -1.6795 0.9096 40 1 6.1754 -1.6827 -0.8704 41 1 8.1219 -0.1472 -0.8673 42 1 8.1164 -0.1436 0.9127 43 1 10.6709 -1.9788 -1.0289 44 1 10.5406 -0.7779 0.3284 45 1 11.5149 -3.3402 2.6060 46 1 8.9281 -1.8267 2.2248 47 1 8.3845 -3.4658 1.6599 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:03 Heat of formation + Delta-G solvation = -132.495489 kcal Electronic energy + Delta-G solvation = -29713.960155 eV Core-core repulsion = 25444.438094 eV Total energy + Delta-G solvation = -4269.522061 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.03762 -40.65006 -40.26770 -39.70850 -38.49150 -37.02143 -36.70385 -35.46941 -32.41493 -32.19635 -30.90592 -29.07887 -28.25493 -26.77270 -26.18282 -25.81816 -24.21510 -22.90572 -22.39147 -21.40011 -20.48787 -20.05882 -18.83709 -18.38760 -18.12932 -17.94222 -17.22737 -16.95772 -16.70575 -16.54428 -16.40521 -16.33222 -16.05603 -15.80115 -15.69340 -15.36927 -15.34330 -15.10882 -14.56342 -14.25950 -14.13150 -13.96124 -13.57215 -13.44027 -13.33649 -13.18472 -12.76608 -12.71515 -12.61377 -12.54846 -12.45974 -12.21024 -12.00598 -11.80931 -11.71610 -11.66733 -11.23983 -10.78131 -10.61369 -10.54811 -9.99321 -9.89173 -9.12249 -5.02671 -0.18498 0.12561 1.23424 1.46638 1.86356 1.92786 2.06025 2.15204 2.21604 2.72815 3.21813 3.41225 3.43408 3.46105 3.56036 3.60686 3.73535 3.73563 3.80942 3.92080 3.98259 4.05638 4.07963 4.10818 4.13671 4.15057 4.24104 4.28169 4.33848 4.43576 4.51873 4.53730 4.57482 4.67459 4.77691 4.79145 4.79797 4.90225 4.93011 5.00128 5.04008 5.11081 5.20521 5.31147 5.41435 5.51955 6.01562 6.30004 6.45837 6.59331 6.69917 7.40626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.223 3.777 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.195 4.195 9 C -0.057 4.057 10 O -0.524 6.524 11 Si 0.681 3.319 12 C -0.013 4.013 13 C -0.209 4.209 14 C 0.565 3.435 15 O -0.519 6.519 16 N -0.734 5.734 17 C 0.122 3.878 18 C -0.121 4.121 19 C -0.106 4.106 20 H 0.097 0.903 21 C -0.124 4.124 22 C 0.073 3.927 23 H 0.082 0.918 24 O -0.561 6.561 25 C -0.167 4.167 26 H 0.107 0.893 27 H 0.058 0.942 28 H 0.057 0.943 29 H 0.145 0.855 30 H 0.059 0.941 31 H 0.059 0.941 32 H 0.107 0.893 33 H 0.119 0.881 34 H 0.372 0.628 35 H -0.253 1.253 36 H -0.257 1.257 37 H 0.140 0.860 38 H 0.396 0.604 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.075 0.925 42 H 0.071 0.929 43 H 0.075 0.925 44 H 0.091 0.909 45 H 0.379 0.621 46 H 0.090 0.910 47 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.268 0.072 -1.866 2.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.206 6.206 7 C -0.073 4.073 8 C -0.196 4.196 9 C -0.167 4.167 10 O -0.330 6.330 11 Si 0.582 3.418 12 C -0.032 4.032 13 C -0.213 4.213 14 C 0.353 3.647 15 O -0.395 6.395 16 N -0.388 5.388 17 C -0.001 4.001 18 C -0.159 4.159 19 C -0.125 4.125 20 H 0.116 0.884 21 C -0.162 4.162 22 C 0.014 3.986 23 H 0.100 0.900 24 O -0.367 6.367 25 C -0.205 4.205 26 H 0.125 0.875 27 H 0.077 0.923 28 H 0.076 0.924 29 H 0.162 0.838 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.125 0.875 33 H 0.136 0.864 34 H 0.219 0.781 35 H -0.177 1.177 36 H -0.182 1.182 37 H 0.157 0.843 38 H 0.231 0.769 39 H 0.087 0.913 40 H 0.088 0.912 41 H 0.093 0.907 42 H 0.090 0.910 43 H 0.094 0.906 44 H 0.109 0.891 45 H 0.226 0.774 46 H 0.108 0.892 47 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.974 0.390 -2.289 2.518 hybrid contribution -0.765 -0.192 1.504 1.698 sum -1.740 0.198 -0.785 1.919 Atomic orbital electron populations 1.23244 0.78232 1.04848 1.01337 1.86403 1.21175 1.25059 1.85771 1.18727 0.90640 0.84403 0.87753 1.21304 1.01123 0.91505 1.19435 1.18708 0.90426 0.84677 0.88675 1.86158 1.19435 1.28487 1.86566 1.23212 0.77844 1.04650 1.01633 1.19361 0.90777 0.96248 1.13241 1.24792 1.10696 0.92894 0.88356 1.86652 1.80054 1.49945 1.16329 0.95240 0.74325 0.82170 0.90081 1.20897 0.99324 0.90078 0.92876 1.19053 0.90656 0.93580 1.17977 1.17798 0.81715 0.88588 0.76639 1.90849 1.71399 1.28707 1.48524 1.45906 1.06060 1.09839 1.76993 1.21348 0.89387 0.86624 1.02737 1.21763 0.93229 0.97763 1.03114 1.22232 0.94750 0.97485 0.98004 0.88439 1.23116 0.94973 0.99429 0.98660 1.23385 0.86806 0.98332 0.90049 0.90043 1.86530 1.59351 1.47475 1.43331 1.23816 0.97404 1.01917 0.97322 0.87473 0.92343 0.92430 0.83770 0.92199 0.92280 0.87504 0.86365 0.78053 1.17742 1.18228 0.84282 0.76941 0.91303 0.91178 0.90676 0.91002 0.90647 0.89068 0.77381 0.89185 0.91091 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.01 8.56 -40.60 -0.35 -1.35 16 3 C 0.23 0.65 6.70 -38.74 -0.26 0.39 16 4 C -0.31 -0.27 8.01 -39.34 -0.31 -0.59 16 5 C 0.22 0.29 6.67 -39.07 -0.26 0.03 16 6 O -0.30 -0.36 9.80 -18.84 -0.18 -0.54 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.19 -0.11 5.27 -104.53 -0.55 -0.66 16 9 C -0.06 -0.01 2.37 36.01 0.09 0.08 16 10 O -0.52 -0.85 12.88 -35.23 -0.45 -1.30 16 11 Si 0.68 -1.07 30.24 -169.99 -5.14 -6.21 16 12 C -0.01 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.51 5.89 -104.83 -0.62 -1.13 16 14 C 0.56 2.14 7.76 -12.57 -0.10 2.05 16 15 O -0.52 -3.95 15.15 -16.66 -0.25 -4.20 16 16 N -0.73 -0.41 5.50 -61.42 -0.34 -0.75 16 17 C 0.12 0.00 5.67 -4.04 -0.02 -0.02 16 18 C -0.12 0.24 5.15 -26.73 -0.14 0.10 16 19 C -0.11 0.17 3.64 -89.81 -0.33 -0.15 16 20 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 21 C -0.12 0.10 7.47 -25.92 -0.19 -0.10 16 22 C 0.07 -0.03 5.21 -25.83 -0.13 -0.17 16 23 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 24 O -0.56 -0.54 13.67 -35.23 -0.48 -1.03 16 25 C -0.17 0.16 7.48 -25.82 -0.19 -0.03 16 26 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 27 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 28 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.14 -0.20 4.50 -52.49 -0.24 -0.43 16 30 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 31 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 32 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 33 H 0.12 0.02 7.82 -51.93 -0.41 -0.39 16 34 H 0.37 -0.53 8.70 45.56 0.40 -0.14 16 35 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 36 H -0.26 0.27 6.68 56.52 0.38 0.65 16 37 H 0.14 -0.32 3.16 -52.49 -0.17 -0.48 16 38 H 0.40 -0.77 6.49 -40.82 -0.26 -1.04 16 39 H 0.07 0.08 8.14 -51.92 -0.42 -0.34 16 40 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 42 H 0.07 -0.13 7.87 -51.93 -0.41 -0.54 16 43 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 44 H 0.09 0.00 8.10 -51.93 -0.42 -0.43 16 45 H 0.38 -1.12 9.12 45.56 0.42 -0.70 16 46 H 0.09 -0.02 7.92 -51.93 -0.41 -0.43 16 47 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 382.18 15.07 5.76 5.76 Total: 0.00 -10.47 382.18 -8.92 -19.38 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -6.12 Total: -11.16 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -1.36 Total: 1.40 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.34 Total: -0.75 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -1.72 Total: -8.42 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.14 Total: -6.21 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.47 -8.92 -19.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.111 kcal (2) G-P(sol) polarization free energy of solvation -10.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.385 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds