Wall clock time and date at job start Tue Mar 9 2021 13:15:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35658 * 117.00276 * 2 1 4 4 C 1.38399 * 120.11756 * 0.02562 * 3 2 1 5 5 C 1.38729 * 120.03135 * 180.02562 * 4 3 2 6 6 O 1.35712 * 119.86184 * 179.97438 * 5 4 3 7 7 C 1.42893 * 117.00141 * 359.97438 * 6 5 4 8 8 C 1.39137 * 120.27238 * 0.02562 * 5 4 3 9 9 C 1.50699 * 119.88134 * 180.02562 * 8 5 4 10 10 O 1.42895 * 109.47235 * 74.99835 * 9 8 5 11 11 Si 1.86304 * 109.47475 * 194.99931 * 9 8 5 12 12 C 1.37586 * 120.24443 * 359.97438 * 8 5 4 13 13 C 1.39824 * 119.95854 * 359.74607 * 12 8 5 14 14 C 1.47309 * 120.13304 * 180.27371 * 13 12 8 15 15 O 1.21619 * 119.99515 * 180.27677 * 14 13 12 16 16 N 1.34774 * 120.00250 * 0.27842 * 14 13 12 17 17 C 1.46493 * 120.00168 * 180.02562 * 16 14 13 18 18 C 1.53005 * 109.47317 * 179.97438 * 17 16 14 19 19 C 1.52992 * 109.47093 * 179.97438 * 18 17 16 20 20 H 1.09003 * 112.85217 * 45.33301 * 19 18 17 21 21 C 1.53775 * 113.61545 * 176.52772 * 19 18 17 22 22 C 1.53781 * 87.08539 * 139.98181 * 21 19 18 23 23 H 1.08996 * 113.61574 * 89.11541 * 22 21 19 24 24 O 1.42897 * 113.61396 * 220.02191 * 22 21 19 25 25 C 1.53786 * 113.61728 * 274.13583 * 19 18 17 26 26 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46938 * 59.99682 * 1 2 3 28 28 H 1.09004 * 109.46926 * 299.99803 * 1 2 3 29 29 H 1.08001 * 119.98566 * 359.97438 * 4 3 2 30 30 H 1.08996 * 109.47682 * 300.00194 * 7 6 5 31 31 H 1.09000 * 109.47580 * 60.00361 * 7 6 5 32 32 H 1.09002 * 109.47256 * 180.02562 * 7 6 5 33 33 H 1.09000 * 109.47038 * 315.00123 * 9 8 5 34 34 H 0.96697 * 114.00335 * 60.00461 * 10 9 8 35 35 H 1.48492 * 110.00191 * 179.97438 * 11 9 8 36 36 H 1.48504 * 109.99643 * 301.31729 * 11 9 8 37 37 H 1.08000 * 120.02472 * 180.02562 * 12 8 5 38 38 H 0.97001 * 119.99814 * 359.97438 * 16 14 13 39 39 H 1.09008 * 109.46925 * 299.99653 * 17 16 14 40 40 H 1.08997 * 109.47607 * 59.99437 * 17 16 14 41 41 H 1.08991 * 109.46684 * 299.99783 * 18 17 16 42 42 H 1.09002 * 109.46669 * 59.99902 * 18 17 16 43 43 H 1.09008 * 113.61796 * 254.53067 * 21 19 18 44 44 H 1.09000 * 113.61391 * 25.43319 * 21 19 18 45 45 H 0.96706 * 114.00066 * 179.97438 * 24 22 21 46 46 H 1.08992 * 113.60998 * 334.56841 * 25 19 18 47 47 H 1.08998 * 113.61631 * 105.46823 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2087 0.0000 4 6 1.2936 2.3710 0.0005 5 6 1.9254 3.6061 0.0000 6 8 1.1852 4.7436 0.0000 7 6 -0.2357 4.5931 0.0000 8 6 3.3146 3.6833 -0.0016 9 6 3.9917 5.0297 -0.0016 10 8 3.8957 5.6111 1.3002 11 14 5.7859 4.8226 -0.4585 12 6 4.0725 2.5351 -0.0022 13 6 3.4462 1.2850 0.0043 14 6 4.2539 0.0531 0.0098 15 8 3.7065 -1.0329 0.0103 16 7 5.5995 0.1296 0.0143 17 6 6.4028 -1.0954 0.0193 18 6 7.8888 -0.7310 0.0231 19 6 8.7277 -2.0104 0.0289 20 1 8.3715 -2.7533 -0.6848 21 6 10.2418 -1.7546 -0.0522 22 6 10.4092 -2.8915 0.9697 23 1 10.5130 -3.8763 0.5143 24 8 11.4053 -2.6289 1.9601 25 6 8.9760 -2.5779 1.4365 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5138 0.8900 29 1 0.2150 2.3165 0.0005 30 1 -0.5430 4.0438 -0.8899 31 1 -0.5430 4.0439 0.8900 32 1 -0.7053 5.5767 -0.0005 33 1 3.5048 5.6812 -0.7273 34 1 4.3087 5.0841 1.9978 35 1 6.4647 6.1433 -0.4626 36 1 6.4534 3.9110 0.5053 37 1 5.1506 2.5992 -0.0030 38 1 6.0360 0.9958 0.0136 39 1 6.1692 -1.6795 0.9096 40 1 6.1754 -1.6827 -0.8704 41 1 8.1219 -0.1472 -0.8673 42 1 8.1164 -0.1436 0.9127 43 1 10.6709 -1.9788 -1.0289 44 1 10.5406 -0.7779 0.3284 45 1 11.5149 -3.3402 2.6060 46 1 8.9281 -1.8267 2.2248 47 1 8.3845 -3.4658 1.6599 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:03 Heat of formation + Delta-G solvation = -136.473415 kcal Electronic energy + Delta-G solvation = -29714.132651 eV Core-core repulsion = 25444.438094 eV Total energy + Delta-G solvation = -4269.694557 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.09829 -40.69108 -40.26614 -39.81231 -38.52355 -37.08170 -36.75860 -35.56243 -32.47521 -32.23572 -30.89888 -28.98578 -28.18019 -26.69048 -26.20392 -25.82022 -24.24701 -22.87738 -22.39698 -21.52393 -20.40951 -20.08319 -18.89355 -18.36339 -18.17084 -17.99000 -17.24697 -17.07439 -16.70601 -16.52222 -16.42158 -16.33080 -16.06120 -15.81076 -15.69588 -15.34544 -15.33920 -15.17102 -14.68250 -14.22172 -14.12833 -13.96805 -13.54560 -13.37407 -13.30562 -13.16462 -12.69838 -12.65692 -12.53951 -12.52669 -12.42445 -12.21275 -11.92400 -11.80894 -11.67982 -11.62944 -11.14790 -10.94133 -10.63209 -10.54758 -10.15152 -9.92456 -9.19753 -4.90877 -0.26434 0.07286 1.30885 1.55470 1.73011 1.97971 2.11509 2.12067 2.18588 2.60143 3.33078 3.43267 3.46749 3.54271 3.60340 3.66619 3.74269 3.79844 3.82582 4.02705 4.09848 4.15182 4.17235 4.23701 4.27100 4.27862 4.29947 4.31947 4.43315 4.55443 4.63344 4.65433 4.67411 4.73414 4.75375 4.84185 4.87085 4.91709 4.98953 5.02191 5.06384 5.17298 5.29385 5.30060 5.43820 5.52862 6.03401 6.28659 6.52248 6.55896 6.88447 7.23574 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.305 6.305 3 C 0.218 3.782 4 C -0.310 4.310 5 C 0.215 3.785 6 O -0.312 6.312 7 C 0.012 3.988 8 C -0.197 4.197 9 C -0.071 4.071 10 O -0.546 6.546 11 Si 0.760 3.240 12 C 0.000 4.000 13 C -0.227 4.227 14 C 0.561 3.439 15 O -0.566 6.566 16 N -0.721 5.721 17 C 0.124 3.876 18 C -0.112 4.112 19 C -0.100 4.100 20 H 0.104 0.896 21 C -0.126 4.126 22 C 0.067 3.933 23 H 0.093 0.907 24 O -0.584 6.584 25 C -0.166 4.166 26 H 0.113 0.887 27 H 0.073 0.927 28 H 0.070 0.930 29 H 0.163 0.837 30 H 0.072 0.928 31 H 0.066 0.934 32 H 0.119 0.881 33 H 0.114 0.886 34 H 0.384 0.616 35 H -0.300 1.300 36 H -0.255 1.255 37 H 0.162 0.838 38 H 0.410 0.590 39 H 0.054 0.946 40 H 0.063 0.937 41 H 0.090 0.910 42 H 0.074 0.926 43 H 0.081 0.919 44 H 0.083 0.917 45 H 0.393 0.607 46 H 0.081 0.919 47 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.037 0.530 -2.245 2.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.215 6.215 3 C 0.168 3.832 4 C -0.330 4.330 5 C 0.167 3.833 6 O -0.223 6.223 7 C -0.082 4.082 8 C -0.199 4.199 9 C -0.179 4.179 10 O -0.354 6.354 11 Si 0.663 3.337 12 C -0.018 4.018 13 C -0.231 4.231 14 C 0.350 3.650 15 O -0.446 6.446 16 N -0.374 5.374 17 C 0.001 3.999 18 C -0.149 4.149 19 C -0.119 4.119 20 H 0.122 0.878 21 C -0.164 4.164 22 C 0.008 3.992 23 H 0.110 0.890 24 O -0.392 6.392 25 C -0.204 4.204 26 H 0.131 0.869 27 H 0.091 0.909 28 H 0.088 0.912 29 H 0.181 0.819 30 H 0.091 0.909 31 H 0.085 0.915 32 H 0.137 0.863 33 H 0.132 0.868 34 H 0.233 0.767 35 H -0.228 1.228 36 H -0.180 1.180 37 H 0.179 0.821 38 H 0.247 0.753 39 H 0.073 0.927 40 H 0.081 0.919 41 H 0.108 0.892 42 H 0.093 0.907 43 H 0.100 0.900 44 H 0.102 0.898 45 H 0.242 0.758 46 H 0.100 0.900 47 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.743 0.849 -2.654 2.884 hybrid contribution -0.893 -0.264 1.644 1.890 sum -1.637 0.585 -1.010 2.010 Atomic orbital electron populations 1.23476 0.76511 1.05763 1.02661 1.86366 1.23218 1.25925 1.86027 1.18984 0.91090 0.84715 0.88387 1.21418 1.02005 0.90731 1.18804 1.18923 0.90934 0.84885 0.88552 1.86143 1.21055 1.28671 1.86464 1.23465 0.76284 1.05849 1.02617 1.19491 0.90816 0.96533 1.13022 1.25092 1.12525 0.92437 0.87844 1.86613 1.80706 1.50796 1.17274 0.94305 0.71186 0.79422 0.88762 1.20999 1.00240 0.88932 0.91661 1.19144 0.90824 0.93798 1.19352 1.18081 0.82551 0.88410 0.75989 1.90815 1.72405 1.30333 1.51032 1.45829 1.05232 1.10816 1.75553 1.21345 0.90522 0.86305 1.01744 1.21704 0.91432 0.97824 1.03987 1.22209 0.94356 0.97690 0.97606 0.87828 1.23123 0.95417 0.98967 0.98858 1.23544 0.86634 0.99000 0.90009 0.88960 1.86484 1.59822 1.48774 1.44107 1.23782 0.97327 1.01794 0.97524 0.86896 0.90855 0.91181 0.81941 0.90942 0.91540 0.86302 0.86813 0.76747 1.22770 1.18039 0.82129 0.75317 0.92711 0.91860 0.89169 0.90705 0.90040 0.89832 0.75777 0.90043 0.90970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.63 8.56 -68.77 -0.59 -3.22 16 3 C 0.22 1.38 6.70 22.82 0.15 1.53 16 4 C -0.31 -0.55 8.01 22.43 0.18 -0.37 16 5 C 0.22 0.54 6.67 22.60 0.15 0.70 16 6 O -0.31 -0.71 9.80 -90.34 -0.89 -1.60 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 8 C -0.20 -0.17 5.27 -19.80 -0.10 -0.28 16 9 C -0.07 0.00 2.37 71.24 0.17 0.17 16 10 O -0.55 -1.77 12.88 -148.98 -1.92 -3.69 16 11 Si 0.76 -3.08 30.24 68.60 2.07 -1.01 16 12 C 0.00 0.00 8.14 22.50 0.18 0.18 16 13 C -0.23 -1.23 5.89 -20.00 -0.12 -1.35 16 14 C 0.56 4.79 7.76 86.63 0.67 5.46 16 15 O -0.57 -9.72 15.15 16.87 0.26 -9.46 16 16 N -0.72 -0.80 5.50 -466.49 -2.57 -3.37 16 17 C 0.12 0.04 5.67 86.38 0.49 0.53 16 18 C -0.11 0.52 5.15 30.59 0.16 0.67 16 19 C -0.10 0.37 3.64 -10.27 -0.04 0.33 16 20 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 21 C -0.13 0.26 7.47 31.12 0.23 0.49 16 22 C 0.07 -0.07 5.21 31.18 0.16 0.09 16 23 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 24 O -0.58 -1.19 13.67 -148.98 -2.04 -3.23 16 25 C -0.17 0.31 7.48 31.18 0.23 0.54 16 26 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 28 H 0.07 -0.29 7.66 -2.38 -0.02 -0.31 16 29 H 0.16 -0.52 4.50 -2.91 -0.01 -0.54 16 30 H 0.07 -0.55 7.65 -2.39 -0.02 -0.57 16 31 H 0.07 -0.43 7.65 -2.39 -0.02 -0.45 16 32 H 0.12 -0.92 8.14 -2.39 -0.02 -0.94 16 33 H 0.11 0.06 7.82 -2.39 -0.02 0.04 16 34 H 0.38 -1.19 8.70 -74.06 -0.64 -1.83 16 35 H -0.30 -1.22 7.11 99.48 0.71 -0.52 16 36 H -0.25 1.11 6.68 99.48 0.66 1.78 16 37 H 0.16 -0.97 3.16 -2.91 -0.01 -0.98 16 38 H 0.41 -2.05 6.49 -92.71 -0.60 -2.65 16 39 H 0.05 0.19 8.14 -2.38 -0.02 0.17 16 40 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 41 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 42 H 0.07 -0.35 7.87 -2.39 -0.02 -0.37 16 43 H 0.08 -0.27 8.14 -2.38 -0.02 -0.29 16 44 H 0.08 -0.03 8.10 -2.39 -0.02 -0.05 16 45 H 0.39 -2.24 9.12 -74.05 -0.68 -2.91 16 46 H 0.08 0.00 7.92 -2.39 -0.02 -0.02 16 47 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 Total: 0.00 -25.61 382.18 -1.82 -27.43 By element: Atomic # 1 Polarization: -11.82 SS G_CDS: -0.90 Total: -12.72 kcal Atomic # 6 Polarization: 6.10 SS G_CDS: 4.75 Total: 10.85 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -2.57 Total: -3.37 kcal Atomic # 8 Polarization: -16.01 SS G_CDS: -5.17 Total: -21.19 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.07 Total: -1.01 kcal Total: -25.61 -1.82 -27.43 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.046 kcal (2) G-P(sol) polarization free energy of solvation -25.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.657 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.427 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.473 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds