Wall clock time and date at job start Tue Mar 9 2021 13:15:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.46646 * 2 1 4 4 C 1.50700 * 109.47427 * 120.00014 * 2 1 3 5 5 C 1.38240 * 119.99757 * 65.00557 * 4 2 1 6 6 C 1.38232 * 119.99693 * 180.02562 * 5 4 2 7 7 C 1.38238 * 120.00355 * 359.97438 * 6 5 4 8 8 C 1.50698 * 120.00295 * 179.97438 * 7 6 5 9 9 C 1.50698 * 109.46944 * 89.99702 * 8 7 6 10 10 O 1.21283 * 120.00472 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99538 * 179.97438 * 9 8 7 12 12 C 1.46499 * 119.99665 * 179.72653 * 11 9 8 13 13 C 1.53004 * 109.47198 * 180.27868 * 12 11 9 14 14 C 1.52997 * 109.47000 * 179.97438 * 13 12 11 15 15 H 1.08993 * 112.85228 * 43.80845 * 14 13 12 16 16 C 1.53789 * 113.61178 * 174.99973 * 14 13 12 17 17 C 1.53778 * 87.08158 * 139.98580 * 16 14 13 18 18 H 1.08993 * 113.61714 * 89.19836 * 17 16 14 19 19 O 1.42900 * 113.61290 * 220.02247 * 17 16 14 20 20 C 1.53781 * 113.61633 * 272.49443 * 14 13 12 21 21 C 1.38236 * 119.99529 * 0.25429 * 7 6 5 22 22 C 1.38231 * 119.99787 * 245.02433 * 4 2 1 23 23 H 0.96695 * 113.99989 * 60.00173 * 1 2 3 24 24 H 1.09001 * 109.47135 * 240.00375 * 2 1 3 25 25 H 1.48496 * 110.00259 * 298.68469 * 3 2 1 26 26 H 1.48501 * 110.00101 * 60.00230 * 3 2 1 27 27 H 1.08000 * 119.99761 * 359.97438 * 5 4 2 28 28 H 1.07996 * 119.99778 * 179.97438 * 6 5 4 29 29 H 1.09003 * 109.46601 * 330.00143 * 8 7 6 30 30 H 1.08993 * 109.46922 * 210.00442 * 8 7 6 31 31 H 0.97001 * 120.00485 * 0.02562 * 11 9 8 32 32 H 1.09009 * 109.47454 * 300.27637 * 12 11 9 33 33 H 1.08998 * 109.47492 * 60.27932 * 12 11 9 34 34 H 1.08995 * 109.46638 * 300.00121 * 13 12 11 35 35 H 1.09006 * 109.47139 * 60.00254 * 13 12 11 36 36 H 1.09008 * 113.61475 * 254.53362 * 16 14 13 37 37 H 1.08997 * 113.61324 * 25.34711 * 16 14 13 38 38 H 0.96702 * 114.00032 * 179.97438 * 19 17 16 39 39 H 1.08991 * 113.61326 * 334.57278 * 20 14 13 40 40 H 1.08998 * 113.61046 * 105.47513 * 20 14 13 41 41 H 1.07996 * 119.99870 * 179.72547 * 21 7 6 42 42 H 1.07993 * 120.00723 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6849 -2.0602 1.3982 6 6 2.1453 -2.7117 2.5271 7 6 2.8527 -2.0136 3.4880 8 6 3.3541 -2.7238 4.7190 9 6 4.7354 -3.2668 4.4580 10 8 5.2611 -3.0938 3.3788 11 7 5.3869 -3.9439 5.4242 12 6 6.7272 -4.4770 5.1685 13 6 7.2343 -5.2023 6.4166 14 6 8.6339 -5.7596 6.1493 15 1 9.2809 -5.0497 5.6342 16 6 9.2863 -6.4043 7.3838 17 6 9.8152 -7.4947 6.4372 18 1 10.7863 -7.2609 6.0010 19 8 9.7582 -8.8107 6.9914 20 6 8.6284 -7.1617 5.5176 21 6 3.0950 -0.6628 3.3224 22 6 2.6384 -0.0121 2.1914 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 1.5877 2.4586 -1.2241 26 1 1.5614 2.4679 1.2085 27 1 1.1320 -2.6055 0.6477 28 1 1.9524 -3.7662 2.6584 29 1 2.6809 -3.5454 4.9639 30 1 3.3906 -2.0231 5.5530 31 1 4.9666 -4.0820 6.2875 32 1 6.6870 -5.1762 4.3332 33 1 7.4036 -3.6579 4.9244 34 1 7.2746 -4.5032 7.2518 35 1 6.5579 -6.0216 6.6608 36 1 10.0722 -5.7951 7.8305 37 1 8.5672 -6.7711 8.1162 38 1 10.0891 -9.5009 6.4005 39 1 7.7295 -7.7368 5.7392 40 1 8.8831 -7.1640 4.4578 41 1 3.6438 -0.1164 4.0751 42 1 2.8304 1.0425 2.0607 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:08 Heat of formation + Delta-G solvation = -74.089910 kcal Electronic energy + Delta-G solvation = -22199.196208 eV Core-core repulsion = 18725.108806 eV Total energy + Delta-G solvation = -3474.087402 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.151 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.10093 -40.50459 -39.88733 -37.71035 -36.78285 -35.54256 -34.12286 -31.86983 -31.77064 -29.62594 -26.81189 -26.20380 -24.93621 -23.71947 -22.69599 -22.04939 -21.20618 -20.51743 -18.52566 -18.48293 -17.96905 -17.58774 -17.04085 -16.86613 -16.52121 -16.32940 -15.92793 -15.51519 -15.41437 -15.05184 -14.75124 -14.54731 -14.33248 -14.15581 -13.84868 -13.48801 -13.45585 -13.38254 -13.06980 -12.93626 -12.70133 -12.49861 -12.15673 -12.06336 -11.88022 -11.75359 -11.60732 -11.28398 -10.88268 -10.70807 -10.43799 -10.06483 -9.75414 -9.51508 -4.91149 0.33779 0.57732 1.32724 1.62634 1.71195 1.97981 2.16073 2.81409 3.18734 3.40663 3.41946 3.51696 3.64809 3.69679 3.86637 3.88452 3.90793 3.96913 4.07420 4.11529 4.21322 4.26444 4.28752 4.43207 4.48043 4.48806 4.57220 4.61813 4.73393 4.75101 4.78136 4.86464 4.93155 5.02965 5.08337 5.15801 5.17010 5.36946 5.42443 5.48168 5.65820 5.67695 6.09080 6.47468 6.48902 6.66989 7.27406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.077 4.077 3 Si 0.684 3.316 4 C -0.072 4.072 5 C -0.090 4.090 6 C -0.104 4.104 7 C -0.063 4.063 8 C -0.103 4.103 9 C 0.513 3.487 10 O -0.527 6.527 11 N -0.735 5.735 12 C 0.120 3.880 13 C -0.119 4.119 14 C -0.107 4.107 15 H 0.097 0.903 16 C -0.125 4.125 17 C 0.073 3.927 18 H 0.082 0.918 19 O -0.561 6.561 20 C -0.166 4.166 21 C -0.100 4.100 22 C -0.113 4.113 23 H 0.379 0.621 24 H 0.076 0.924 25 H -0.262 1.262 26 H -0.255 1.255 27 H 0.124 0.876 28 H 0.122 0.878 29 H 0.104 0.896 30 H 0.105 0.895 31 H 0.401 0.599 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.074 0.926 37 H 0.091 0.909 38 H 0.379 0.621 39 H 0.090 0.910 40 H 0.070 0.930 41 H 0.125 0.875 42 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.007 -0.909 1.745 2.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.585 3.415 4 C -0.072 4.072 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.064 4.064 8 C -0.143 4.143 9 C 0.299 3.701 10 O -0.402 6.402 11 N -0.388 5.388 12 C -0.004 4.004 13 C -0.157 4.157 14 C -0.126 4.126 15 H 0.115 0.885 16 C -0.162 4.162 17 C 0.014 3.986 18 H 0.100 0.900 19 O -0.367 6.367 20 C -0.204 4.204 21 C -0.118 4.118 22 C -0.131 4.131 23 H 0.227 0.773 24 H 0.094 0.906 25 H -0.187 1.187 26 H -0.180 1.180 27 H 0.142 0.858 28 H 0.140 0.860 29 H 0.123 0.877 30 H 0.123 0.877 31 H 0.235 0.765 32 H 0.086 0.914 33 H 0.086 0.914 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.110 0.890 38 H 0.227 0.773 39 H 0.109 0.891 40 H 0.089 0.911 41 H 0.143 0.857 42 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.035 0.074 2.012 2.863 hybrid contribution -1.038 -0.578 -0.618 1.339 sum 0.997 -0.504 1.394 1.786 Atomic orbital electron populations 1.86590 1.17869 1.80181 1.49700 1.24810 0.84370 1.11028 0.98430 0.94913 0.91808 0.74652 0.80094 1.19219 0.98763 0.94180 0.95070 1.20934 0.98519 0.93822 0.97543 1.20987 0.97886 0.99604 0.93739 1.19259 0.98032 0.93747 0.95347 1.20687 0.94172 1.01623 0.97835 1.20571 0.87402 0.77957 0.84168 1.90757 1.68304 1.57008 1.24143 1.46042 1.18514 1.57438 1.16806 1.21360 0.82993 0.97992 0.98014 1.21745 0.96140 1.00351 0.97433 1.22242 0.96327 0.96159 0.97848 0.88497 1.23124 1.00563 0.95646 0.96887 1.23351 0.96970 0.83087 0.95153 0.90013 1.86530 1.87522 1.16597 1.46049 1.23788 1.00219 0.96632 0.99767 1.20879 0.99343 0.93923 0.97635 1.20914 0.98924 0.99376 0.93869 0.77349 0.90644 1.18698 1.17993 0.85802 0.85979 0.87750 0.87691 0.76502 0.91397 0.91389 0.90826 0.90930 0.90682 0.89046 0.77349 0.89140 0.91113 0.85722 0.85610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.18 12.81 -35.23 -0.45 -1.63 16 2 C -0.08 -0.10 2.79 36.01 0.10 0.00 16 3 Si 0.68 0.16 29.85 -169.99 -5.07 -4.91 16 4 C -0.07 -0.20 5.38 -104.62 -0.56 -0.77 16 5 C -0.09 -0.26 9.69 -39.58 -0.38 -0.64 16 6 C -0.10 -0.23 9.70 -39.58 -0.38 -0.62 16 7 C -0.06 -0.11 4.37 -104.62 -0.46 -0.57 16 8 C -0.10 0.12 5.83 -29.04 -0.17 -0.05 16 9 C 0.51 0.63 7.82 -10.99 -0.09 0.54 16 10 O -0.53 -3.03 16.03 5.55 0.09 -2.95 16 11 N -0.74 1.00 5.56 -60.29 -0.33 0.67 16 12 C 0.12 -0.11 5.66 -4.04 -0.02 -0.13 16 13 C -0.12 0.31 5.17 -26.73 -0.14 0.18 16 14 C -0.11 0.22 3.65 -89.80 -0.33 -0.11 16 15 H 0.10 -0.23 8.13 -51.93 -0.42 -0.65 16 16 C -0.12 0.14 7.47 -25.92 -0.19 -0.06 16 17 C 0.07 -0.06 5.21 -25.92 -0.14 -0.19 16 18 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 19 O -0.56 -0.37 13.67 -35.23 -0.48 -0.85 16 20 C -0.17 0.23 7.46 -25.91 -0.19 0.04 16 21 C -0.10 -0.18 9.70 -39.58 -0.38 -0.57 16 22 C -0.11 -0.25 8.67 -39.58 -0.34 -0.60 16 23 H 0.38 -0.72 8.74 45.56 0.40 -0.32 16 24 H 0.08 -0.02 7.96 -51.93 -0.41 -0.43 16 25 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 26 H -0.26 -0.79 7.05 56.52 0.40 -0.39 16 27 H 0.12 0.23 8.06 -52.49 -0.42 -0.19 16 28 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 29 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 30 H 0.10 -0.35 8.08 -51.93 -0.42 -0.77 16 31 H 0.40 -1.69 8.47 -40.82 -0.35 -2.03 16 32 H 0.07 0.03 8.14 -51.92 -0.42 -0.39 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.19 7.84 -51.93 -0.41 -0.60 16 36 H 0.07 -0.11 8.14 -51.92 -0.42 -0.54 16 37 H 0.09 -0.04 8.10 -51.93 -0.42 -0.46 16 38 H 0.38 -1.24 9.12 45.56 0.42 -0.82 16 39 H 0.09 -0.07 7.89 -51.93 -0.41 -0.48 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 42 H 0.13 0.07 4.87 -52.49 -0.26 -0.19 16 LS Contribution 350.99 15.07 5.29 5.29 Total: 0.00 -9.66 350.99 -10.35 -20.01 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -5.71 Total: -12.10 kcal Atomic # 6 Polarization: 0.15 SS G_CDS: -3.68 Total: -3.53 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.33 Total: 0.67 kcal Atomic # 8 Polarization: -4.58 SS G_CDS: -0.84 Total: -5.42 kcal Atomic # 14 Polarization: 0.16 SS G_CDS: -5.07 Total: -4.91 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -9.66 -10.35 -20.01 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.078 kcal (2) G-P(sol) polarization free energy of solvation -9.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.351 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.090 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds