Wall clock time and date at job start Tue Mar 9 2021 13:15:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.34449 * 126.48410 * 104.68584 * 4 2 1 6 6 N 1.36565 * 109.98538 * 179.87144 * 5 4 2 7 7 C 1.37827 * 109.86178 * 0.41058 * 6 5 4 8 8 C 1.38642 * 133.38587 * 179.80841 * 7 6 5 9 9 C 1.39318 * 119.67135 * 180.02562 * 8 7 6 10 10 C 1.47576 * 119.83239 * 179.97438 * 9 8 7 11 11 O 1.21587 * 120.00140 * 359.97438 * 10 9 8 12 12 N 1.34778 * 119.99764 * 179.97438 * 10 9 8 13 13 C 1.46496 * 119.99969 * 180.02562 * 12 10 9 14 14 C 1.53001 * 109.47537 * 179.97438 * 13 12 10 15 15 C 1.52994 * 109.47505 * 179.97438 * 14 13 12 16 16 H 1.09005 * 112.84607 * 43.80281 * 15 14 13 17 17 C 1.53775 * 113.61535 * 174.99702 * 15 14 13 18 18 C 1.53785 * 87.08276 * 139.98282 * 17 15 14 19 19 H 1.08999 * 113.61355 * 89.19948 * 18 17 15 20 20 O 1.42903 * 113.61340 * 220.02194 * 18 17 15 21 21 C 1.53781 * 87.07911 * 334.57000 * 18 17 15 22 22 C 1.40203 * 120.33428 * 359.96058 * 9 8 7 23 23 C 1.36235 * 120.37570 * 359.97438 * 22 9 8 24 24 C 1.39871 * 119.96067 * 0.02562 * 23 22 9 25 25 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 26 26 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 27 27 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 28 28 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 29 29 H 1.08004 * 125.00439 * 0.02825 * 5 4 2 30 30 H 0.96999 * 125.06658 * 180.17030 * 6 5 4 31 31 H 1.08004 * 120.16581 * 359.96993 * 8 7 6 32 32 H 0.97005 * 120.00004 * 359.97438 * 12 10 9 33 33 H 1.09006 * 109.46697 * 299.99231 * 13 12 10 34 34 H 1.09001 * 109.47611 * 59.98864 * 13 12 10 35 35 H 1.09001 * 109.46426 * 300.00150 * 14 13 12 36 36 H 1.09004 * 109.46930 * 59.99202 * 14 13 12 37 37 H 1.09000 * 113.61590 * 254.53137 * 17 15 14 38 38 H 1.09005 * 113.61507 * 25.43233 * 17 15 14 39 39 H 0.96704 * 113.99526 * 180.02562 * 20 18 17 40 40 H 1.09008 * 113.61374 * 270.88489 * 21 18 17 41 41 H 1.08996 * 113.61506 * 139.98098 * 21 18 17 42 42 H 1.08000 * 119.81297 * 180.02562 * 22 9 8 43 43 H 1.08005 * 120.01875 * 180.02562 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4562 -0.1360 -2.3270 6 7 2.8026 -1.0947 -3.2357 7 6 2.4940 -2.3432 -2.7400 8 6 2.6310 -3.6280 -3.2426 9 6 2.2127 -4.7155 -2.4789 10 6 2.3563 -6.0847 -3.0107 11 8 2.8382 -6.2613 -4.1129 12 7 1.9532 -7.1392 -2.2745 13 6 2.0962 -8.4983 -2.8022 14 6 1.5672 -9.5022 -1.7759 15 6 1.7160 -10.9216 -2.3272 16 1 2.6813 -11.0913 -2.8042 17 6 1.3247 -12.0172 -1.3216 18 6 0.6697 -12.7558 -2.5008 19 1 1.3479 -13.4288 -3.0254 20 8 -0.5767 -13.3712 -2.1694 21 6 0.5184 -11.3820 -3.1750 22 6 1.6563 -4.5159 -1.2076 23 6 1.5193 -3.2569 -0.7056 24 6 1.9345 -2.1549 -1.4603 25 1 -0.3932 0.4418 0.7651 26 1 1.7924 -0.5139 0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5881 2.4585 1.2242 29 1 2.5870 0.9269 -2.4672 30 1 3.2026 -0.9225 -4.1024 31 1 3.0590 -3.7850 -4.2217 32 1 1.5690 -6.9983 -1.3950 33 1 1.5276 -8.5905 -3.7276 34 1 3.1484 -8.7023 -3.0005 35 1 2.1361 -9.4098 -0.8507 36 1 0.5150 -9.2984 -1.5773 37 1 2.1786 -12.5446 -0.8962 38 1 0.6134 -11.6829 -0.5663 39 1 -0.9934 -13.8377 -2.9070 40 1 -0.4135 -10.8739 -2.9265 41 1 0.7213 -11.3964 -4.2458 42 1 1.3352 -5.3651 -0.6226 43 1 1.0902 -3.1097 0.2746 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:11 Heat of formation + Delta-G solvation = -33.512297 kcal Electronic energy + Delta-G solvation = -25092.775868 eV Core-core repulsion = 21298.569851 eV Total energy + Delta-G solvation = -3794.206017 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.42100 -40.81430 -40.27675 -37.91601 -37.51763 -36.75631 -35.55671 -33.32270 -31.99926 -30.72891 -30.20498 -26.78669 -26.54473 -25.96142 -24.06005 -23.57776 -22.60934 -21.33803 -20.58651 -20.47867 -19.22124 -18.46894 -18.44491 -18.14335 -17.39443 -16.88151 -16.66253 -16.32858 -15.88391 -15.58709 -15.42519 -15.39743 -15.10871 -14.98461 -14.71739 -14.70226 -14.33055 -14.11358 -13.83888 -13.44786 -13.35446 -13.15359 -12.76570 -12.62864 -12.58297 -12.42772 -12.14415 -12.02548 -11.83684 -11.72473 -11.25097 -10.89547 -10.69855 -10.68822 -10.38554 -10.04540 -9.29887 -8.76563 -4.99096 -0.20540 0.44167 1.27132 1.39620 1.55182 1.90210 1.94251 2.07082 2.28943 2.98032 3.21246 3.43986 3.47937 3.55019 3.63339 3.72494 3.75247 3.82380 3.91322 3.99604 4.04810 4.12445 4.24430 4.26870 4.32139 4.42087 4.51847 4.53141 4.61643 4.65951 4.76078 4.77020 4.78682 4.89959 4.96810 5.02976 5.07350 5.19079 5.28985 5.40318 5.43571 5.47724 5.55761 5.65089 6.03250 6.41280 6.51382 6.54165 6.69599 7.29502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.038 4.038 3 Si 0.681 3.319 4 C -0.164 4.164 5 C 0.080 3.920 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.563 3.437 11 O -0.539 6.539 12 N -0.727 5.727 13 C 0.120 3.880 14 C -0.120 4.120 15 C -0.106 4.106 16 H 0.097 0.903 17 C -0.125 4.125 18 C 0.073 3.927 19 H 0.082 0.918 20 O -0.561 6.561 21 C -0.167 4.167 22 C -0.114 4.114 23 C -0.072 4.072 24 C -0.063 4.063 25 H 0.377 0.623 26 H 0.073 0.927 27 H -0.255 1.255 28 H -0.260 1.260 29 H 0.177 0.823 30 H 0.423 0.577 31 H 0.136 0.864 32 H 0.401 0.599 33 H 0.070 0.930 34 H 0.069 0.931 35 H 0.074 0.926 36 H 0.073 0.927 37 H 0.075 0.925 38 H 0.091 0.909 39 H 0.379 0.621 40 H 0.090 0.910 41 H 0.070 0.930 42 H 0.126 0.874 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.988 1.254 2.501 3.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.148 4.148 3 Si 0.582 3.418 4 C -0.172 4.172 5 C -0.049 4.049 6 N -0.186 5.186 7 C -0.024 4.024 8 C -0.077 4.077 9 C -0.126 4.126 10 C 0.351 3.649 11 O -0.417 6.417 12 N -0.380 5.380 13 C -0.003 4.003 14 C -0.158 4.158 15 C -0.125 4.125 16 H 0.115 0.885 17 C -0.162 4.162 18 C 0.014 3.986 19 H 0.100 0.900 20 O -0.367 6.367 21 C -0.204 4.204 22 C -0.133 4.133 23 C -0.091 4.091 24 C -0.068 4.068 25 H 0.224 0.776 26 H 0.091 0.909 27 H -0.179 1.179 28 H -0.185 1.185 29 H 0.194 0.806 30 H 0.261 0.739 31 H 0.154 0.846 32 H 0.237 0.763 33 H 0.088 0.912 34 H 0.088 0.912 35 H 0.093 0.907 36 H 0.091 0.909 37 H 0.093 0.907 38 H 0.110 0.890 39 H 0.226 0.774 40 H 0.109 0.891 41 H 0.089 0.911 42 H 0.143 0.857 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.412 1.926 1.613 3.482 hybrid contribution -1.251 -0.194 -0.046 1.267 sum 1.161 1.732 1.567 2.608 Atomic orbital electron populations 1.86645 1.18263 1.79963 1.49507 1.24015 0.83894 1.09861 0.97044 0.95229 0.91509 0.74479 0.80624 1.19501 1.09498 0.91348 0.96812 1.21746 0.99837 0.94412 0.88913 1.41690 1.54728 1.03980 1.18164 1.18059 1.03289 0.86317 0.94763 1.20070 0.99451 0.88039 1.00119 1.19419 1.05053 0.92328 0.95846 1.18151 0.77590 0.84580 0.84626 1.90792 1.44485 1.86263 1.20187 1.45900 1.64605 1.06268 1.21207 1.21388 1.01730 0.79903 0.97312 1.21754 1.02123 0.93334 0.98546 1.22237 0.99113 0.93468 0.97718 0.88471 1.23124 1.00234 0.95998 0.96847 1.23354 0.86024 0.91947 0.97255 0.90029 1.86532 1.36138 1.73185 1.40832 1.23793 0.99066 0.97724 0.99851 1.20674 1.00639 0.97285 0.94737 1.20161 0.98791 0.90480 0.99631 1.19168 1.00964 0.93012 0.93636 0.77585 0.90920 1.17943 1.18461 0.80649 0.73944 0.84590 0.76320 0.91210 0.91218 0.90748 0.90852 0.90672 0.89025 0.77371 0.89105 0.91108 0.85666 0.85337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.66 12.86 -35.23 -0.45 -1.11 16 2 C -0.04 0.01 3.05 36.01 0.11 0.12 16 3 Si 0.68 -1.17 30.80 -169.99 -5.24 -6.40 16 4 C -0.16 -0.21 5.60 -102.74 -0.58 -0.79 16 5 C 0.08 -0.03 10.43 -16.78 -0.18 -0.21 16 6 N -0.58 0.22 6.07 -10.68 -0.06 0.15 16 7 C 0.08 0.17 7.26 -84.00 -0.61 -0.44 16 8 C -0.06 -0.15 9.61 -39.03 -0.37 -0.52 16 9 C -0.12 -0.30 5.87 -104.95 -0.62 -0.92 16 10 C 0.56 1.98 7.76 -12.45 -0.10 1.88 16 11 O -0.54 -3.83 16.31 5.29 0.09 -3.75 16 12 N -0.73 -0.31 5.50 -61.33 -0.34 -0.65 16 13 C 0.12 0.00 5.66 -4.04 -0.02 -0.02 16 14 C -0.12 0.23 5.17 -26.73 -0.14 0.10 16 15 C -0.11 0.17 3.65 -89.81 -0.33 -0.16 16 16 H 0.10 -0.19 8.13 -51.93 -0.42 -0.61 16 17 C -0.12 0.09 7.47 -25.92 -0.19 -0.10 16 18 C 0.07 -0.03 5.21 -25.92 -0.14 -0.17 16 19 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 20 O -0.56 -0.55 13.67 -35.23 -0.48 -1.03 16 21 C -0.17 0.16 7.46 -25.92 -0.19 -0.03 16 22 C -0.11 -0.08 9.46 -39.56 -0.37 -0.45 16 23 C -0.07 -0.10 10.03 -39.69 -0.40 -0.50 16 24 C -0.06 -0.16 6.35 -105.04 -0.67 -0.82 16 25 H 0.38 -1.06 8.74 45.56 0.40 -0.67 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 27 H -0.25 -0.21 7.04 56.52 0.40 0.19 16 28 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 29 H 0.18 -0.55 6.31 -52.48 -0.33 -0.89 16 30 H 0.42 -1.38 8.96 -40.82 -0.37 -1.75 16 31 H 0.14 0.32 7.62 -52.48 -0.40 -0.08 16 32 H 0.40 -0.85 6.46 -40.82 -0.26 -1.12 16 33 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.07 -0.15 7.84 -51.93 -0.41 -0.55 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.09 0.00 8.10 -51.93 -0.42 -0.42 16 39 H 0.38 -1.11 9.12 45.56 0.42 -0.70 16 40 H 0.09 -0.03 7.90 -51.92 -0.41 -0.44 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.13 -0.28 6.36 -52.49 -0.33 -0.61 16 43 H 0.13 -0.02 8.06 -52.48 -0.42 -0.44 16 LS Contribution 359.81 15.07 5.42 5.42 Total: 0.00 -10.69 359.81 -10.97 -21.66 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -5.11 Total: -11.25 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -4.79 Total: -3.03 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.40 Total: -0.50 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -0.85 Total: -5.90 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.24 Total: -6.40 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.69 -10.97 -21.66 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.854 kcal (2) G-P(sol) polarization free energy of solvation -10.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds