Wall clock time and date at job start Tue Mar 9 2021 13:15:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86294 * 109.47692 * 2 1 4 4 C 1.50703 * 109.46773 * 120.00147 * 2 1 3 5 5 C 1.38319 * 119.91922 * 245.01468 * 4 2 1 6 6 C 1.38474 * 120.28168 * 180.02562 * 5 4 2 7 7 Br 1.89102 * 119.93484 * 179.97438 * 6 5 4 8 8 C 1.38024 * 120.12532 * 359.68028 * 6 5 4 9 9 C 1.39589 * 119.83915 * 0.57496 * 8 6 5 10 10 C 1.47849 * 120.13896 * 179.71784 * 9 8 6 11 11 O 1.21553 * 119.99954 * 179.72652 * 10 9 8 12 12 N 1.34777 * 119.99699 * 0.02562 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.72334 * 12 10 9 14 14 C 1.52999 * 109.47192 * 180.02562 * 13 12 10 15 15 C 1.52998 * 109.47306 * 180.02562 * 14 13 12 16 16 H 1.09003 * 112.84916 * 43.80022 * 15 14 13 17 17 C 1.53782 * 113.61335 * 174.99470 * 15 14 13 18 18 C 1.53784 * 87.07594 * 139.98217 * 17 15 14 19 19 H 1.08999 * 113.61424 * 89.11996 * 18 17 15 20 20 O 1.42910 * 113.60896 * 220.01589 * 18 17 15 21 21 C 1.53776 * 87.08348 * 334.56486 * 18 17 15 22 22 C 1.37986 * 119.92515 * 64.99601 * 4 2 1 23 23 H 0.96701 * 113.99715 * 300.00734 * 1 2 3 24 24 H 1.08996 * 109.47130 * 239.99728 * 2 1 3 25 25 H 1.48499 * 110.00511 * 178.68189 * 3 2 1 26 26 H 1.48501 * 109.99784 * 300.00063 * 3 2 1 27 27 H 1.07997 * 119.86220 * 0.02562 * 5 4 2 28 28 H 1.07997 * 120.08058 * 180.29865 * 8 6 5 29 29 H 0.97000 * 120.00483 * 359.72766 * 12 10 9 30 30 H 1.09003 * 109.46699 * 299.99993 * 13 12 10 31 31 H 1.08993 * 109.47199 * 60.00006 * 13 12 10 32 32 H 1.09009 * 109.46616 * 300.00010 * 14 13 12 33 33 H 1.08993 * 109.47533 * 59.99611 * 14 13 12 34 34 H 1.08996 * 113.61358 * 254.52689 * 17 15 14 35 35 H 1.09001 * 113.61654 * 25.35203 * 17 15 14 36 36 H 0.96702 * 113.99403 * 179.97438 * 20 18 17 37 37 H 1.08994 * 113.61992 * 270.88703 * 21 18 17 38 38 H 1.09000 * 113.61135 * 139.98262 * 21 18 17 39 39 H 1.07998 * 120.06028 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.6386 -0.0103 2.1910 6 6 3.1040 -0.6557 3.3243 7 35 4.0706 0.3110 4.6308 8 6 2.8585 -2.0019 3.5049 9 6 2.1498 -2.7147 2.5363 10 6 1.8885 -4.1583 2.7200 11 8 1.2668 -4.7754 1.8773 12 7 2.3344 -4.7885 3.8248 13 6 2.0702 -6.2176 4.0097 14 6 2.6789 -6.6815 5.3346 15 6 2.4036 -8.1741 5.5274 16 1 2.5701 -8.7558 4.6208 17 6 3.0795 -8.7691 6.7740 18 6 1.7882 -9.5752 6.9927 19 1 1.7853 -10.5408 6.4870 20 8 1.3942 -9.6640 8.3635 21 6 1.0587 -8.4689 6.2125 22 6 1.6840 -2.0578 1.3965 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5139 -0.8899 25 1 3.5347 1.7701 0.0321 26 1 1.5616 2.4678 -1.2085 27 1 2.8287 1.0443 2.0566 28 1 3.2177 -2.5034 4.3913 29 1 2.8302 -4.2959 4.4975 30 1 0.9939 -6.3890 4.0250 31 1 2.5159 -6.7787 3.1885 32 1 3.7553 -6.5099 5.3196 33 1 2.2329 -6.1203 6.1556 34 1 3.9473 -9.3881 6.5466 35 1 3.2758 -8.0359 7.5563 36 1 0.5825 -10.1695 8.5073 37 1 0.7013 -7.6538 6.8417 38 1 0.2952 -8.8455 5.5318 39 1 1.1310 -2.6029 0.6459 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:27 Heat of formation + Delta-G solvation = -65.569514 kcal Electronic energy + Delta-G solvation = -22564.847248 eV Core-core repulsion = 18906.848934 eV Total energy + Delta-G solvation = -3657.998314 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.56839 -40.56480 -39.88607 -37.73661 -36.87585 -35.69460 -33.66861 -33.40520 -31.41011 -30.52166 -27.13479 -26.83964 -26.41134 -24.44703 -22.92365 -22.66415 -21.47470 -20.54765 -19.22874 -18.45960 -17.98151 -17.61360 -17.30484 -16.82252 -16.58417 -16.35653 -16.16798 -15.66986 -15.45097 -15.36595 -15.00838 -14.84155 -14.39523 -14.29746 -14.01005 -13.50973 -13.48244 -13.29936 -13.03218 -12.80601 -12.57713 -12.23677 -12.10220 -11.99551 -11.98318 -11.79389 -11.51547 -11.31236 -11.10665 -10.76558 -10.61265 -10.37534 -10.15345 -9.96654 -5.16116 -0.54393 -0.22042 0.35823 1.12514 1.50550 1.57264 1.85735 1.96770 2.47481 3.15446 3.18311 3.29286 3.37497 3.41512 3.49468 3.66044 3.72144 3.79706 3.86691 3.91655 3.96502 4.13284 4.16223 4.23476 4.24366 4.42855 4.45205 4.57290 4.68606 4.71656 4.72876 4.82911 4.87371 4.89461 4.97902 5.04416 5.13416 5.24792 5.34925 5.35983 6.31036 6.44123 6.66029 7.05689 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.119 4.119 5 C -0.063 4.063 6 C -0.094 4.094 7 Br -0.032 7.032 8 C -0.054 4.054 9 C -0.127 4.127 10 C 0.560 3.440 11 O -0.527 6.527 12 N -0.726 5.726 13 C 0.119 3.881 14 C -0.120 4.120 15 C -0.107 4.107 16 H 0.097 0.903 17 C -0.125 4.125 18 C 0.074 3.926 19 H 0.082 0.918 20 O -0.561 6.561 21 C -0.167 4.167 22 C -0.017 4.017 23 H 0.381 0.619 24 H 0.121 0.879 25 H -0.253 1.253 26 H -0.248 1.248 27 H 0.142 0.858 28 H 0.139 0.861 29 H 0.400 0.600 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.075 0.925 35 H 0.091 0.909 36 H 0.379 0.621 37 H 0.091 0.909 38 H 0.070 0.930 39 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.488 0.882 3.353 3.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.583 3.417 4 C -0.121 4.121 5 C -0.082 4.082 6 C -0.174 4.174 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.131 4.131 10 C 0.347 3.653 11 O -0.404 6.404 12 N -0.379 5.379 13 C -0.004 4.004 14 C -0.158 4.158 15 C -0.126 4.126 16 H 0.116 0.884 17 C -0.162 4.162 18 C 0.015 3.985 19 H 0.100 0.900 20 O -0.367 6.367 21 C -0.204 4.204 22 C -0.037 4.037 23 H 0.228 0.772 24 H 0.138 0.862 25 H -0.177 1.177 26 H -0.173 1.173 27 H 0.159 0.841 28 H 0.156 0.844 29 H 0.236 0.764 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.093 0.907 33 H 0.092 0.908 34 H 0.093 0.907 35 H 0.110 0.890 36 H 0.227 0.773 37 H 0.109 0.891 38 H 0.089 0.911 39 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.518 1.416 2.345 3.132 hybrid contribution -0.309 -0.963 -0.143 1.021 sum 1.210 0.454 2.202 2.553 Atomic orbital electron populations 1.86553 1.16543 1.81633 1.49258 1.25087 0.85657 1.10171 0.96873 0.94874 0.81372 0.77594 0.87873 1.20382 0.99816 0.94592 0.97277 1.21197 0.95341 0.99839 0.91858 1.21651 1.04009 0.95124 0.96617 1.96849 1.72405 1.73551 1.51827 1.21285 0.95499 0.92359 0.98303 1.19971 1.02674 0.93775 0.96713 1.18099 0.79147 0.86357 0.81739 1.90829 1.39782 1.67150 1.42599 1.45927 1.58006 1.11253 1.22668 1.21437 1.01396 0.79780 0.97758 1.21760 1.01629 0.95690 0.96715 1.22237 0.97031 0.95356 0.97933 0.88448 1.23121 0.96383 0.99351 0.97344 1.23344 0.96162 0.96840 0.82196 0.90009 1.86533 1.47236 1.77540 1.25359 1.23792 0.96929 1.00184 0.99527 1.21305 0.93585 0.93120 0.95649 0.77195 0.86218 1.17733 1.17253 0.84075 0.84370 0.76414 0.90958 0.91029 0.90736 0.90777 0.90665 0.89012 0.77336 0.89095 0.91079 0.83419 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.18 12.83 -35.23 -0.45 -0.27 16 2 C -0.07 0.06 2.80 36.01 0.10 0.16 16 3 Si 0.68 -1.20 29.79 -169.99 -5.06 -6.26 16 4 C -0.12 0.07 5.34 -104.68 -0.56 -0.49 16 5 C -0.06 0.08 8.41 -39.46 -0.33 -0.26 16 6 C -0.09 0.08 6.22 -39.57 -0.25 -0.16 16 7 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 8 C -0.05 0.06 9.28 -39.16 -0.36 -0.30 16 9 C -0.13 -0.07 5.87 -104.97 -0.62 -0.68 16 10 C 0.56 1.13 7.77 -12.33 -0.10 1.03 16 11 O -0.53 -3.10 16.35 5.32 0.09 -3.01 16 12 N -0.73 0.63 5.51 -61.25 -0.34 0.30 16 13 C 0.12 -0.12 5.67 -4.04 -0.02 -0.15 16 14 C -0.12 0.33 5.16 -26.73 -0.14 0.19 16 15 C -0.11 0.24 3.65 -89.81 -0.33 -0.09 16 16 H 0.10 -0.25 8.13 -51.93 -0.42 -0.67 16 17 C -0.12 0.15 7.47 -25.92 -0.19 -0.04 16 18 C 0.07 -0.07 5.21 -25.92 -0.14 -0.20 16 19 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 20 O -0.56 -0.31 13.67 -35.23 -0.48 -0.79 16 21 C -0.17 0.27 7.46 -25.92 -0.19 0.07 16 22 C -0.02 -0.01 9.23 -39.18 -0.36 -0.38 16 23 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 24 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 25 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 26 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 27 H 0.14 -0.40 4.89 -52.49 -0.26 -0.66 16 28 H 0.14 -0.48 6.41 -52.49 -0.34 -0.82 16 29 H 0.40 -1.38 6.51 -40.82 -0.27 -1.64 16 30 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.07 -0.24 8.14 -51.92 -0.42 -0.67 16 33 H 0.07 -0.21 7.84 -51.93 -0.41 -0.62 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 36 H 0.38 -1.27 9.12 45.56 0.42 -0.85 16 37 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 38 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.15 0.27 7.65 -52.49 -0.40 -0.13 16 LS Contribution 347.65 15.07 5.24 5.24 Total: 0.00 -8.28 347.65 -11.04 -19.32 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -4.26 Total: -10.97 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -3.48 Total: -1.29 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.34 Total: 0.30 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -0.85 Total: -4.08 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.06 Total: -6.26 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -8.28 -11.04 -19.32 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.249 kcal (2) G-P(sol) polarization free energy of solvation -8.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.320 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.570 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds