Wall clock time and date at job start Tue Mar 9 2021 13:15:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.46821 * 2 1 4 4 C 1.50700 * 109.47185 * 119.99995 * 2 1 3 5 5 C 1.38403 * 119.82534 * 65.00304 * 4 2 1 6 6 C 1.37893 * 120.16807 * 180.27866 * 5 4 2 7 7 C 1.39835 * 119.82392 * 359.51074 * 6 5 4 8 8 C 1.47215 * 120.16558 * 180.23040 * 7 6 5 9 9 C 1.34806 * 119.99742 * 0.25578 * 8 7 6 10 10 C 1.46436 * 119.99593 * 179.97438 * 9 8 7 11 11 O 1.21696 * 119.99891 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99894 * 180.02562 * 10 9 8 13 13 C 1.46494 * 119.99835 * 180.02562 * 12 10 9 14 14 C 1.53000 * 109.46932 * 179.97438 * 13 12 10 15 15 C 1.53005 * 109.47108 * 179.97438 * 14 13 12 16 16 H 1.09000 * 112.84927 * 316.20032 * 15 14 13 17 17 C 1.53782 * 113.61359 * 87.50104 * 15 14 13 18 18 C 1.53780 * 87.07998 * 139.98260 * 17 15 14 19 19 H 1.08997 * 113.69199 * 89.12850 * 18 17 15 20 20 O 1.42904 * 113.61738 * 220.02161 * 18 17 15 21 21 C 1.53782 * 87.08411 * 334.56807 * 18 17 15 22 22 C 1.39830 * 119.66455 * 0.48903 * 7 6 5 23 23 C 1.37896 * 119.82712 * 359.74424 * 22 7 6 24 24 H 0.96704 * 113.99978 * 299.99655 * 1 2 3 25 25 H 1.08998 * 109.47323 * 240.00546 * 2 1 3 26 26 H 1.48495 * 110.00271 * 300.00126 * 3 2 1 27 27 H 1.48505 * 109.99857 * 61.32238 * 3 2 1 28 28 H 1.08002 * 119.91248 * 359.97438 * 5 4 2 29 29 H 1.08004 * 120.08208 * 179.72269 * 6 5 4 30 30 H 1.07996 * 119.99948 * 180.25262 * 8 7 6 31 31 H 1.07996 * 120.00840 * 359.97438 * 9 8 7 32 32 H 0.96995 * 120.00023 * 0.02562 * 12 10 9 33 33 H 1.09003 * 109.47357 * 299.99879 * 13 12 10 34 34 H 1.09000 * 109.47266 * 60.00177 * 13 12 10 35 35 H 1.08994 * 109.47642 * 300.00087 * 14 13 12 36 36 H 1.08994 * 109.47117 * 60.00726 * 14 13 12 37 37 H 1.08998 * 113.61728 * 254.53289 * 17 15 14 38 38 H 1.09005 * 113.61467 * 25.43868 * 17 15 14 39 39 H 0.96696 * 114.00048 * 277.50439 * 20 18 17 40 40 H 1.09000 * 113.61598 * 270.88606 * 21 18 17 41 41 H 1.08996 * 113.69239 * 139.98614 * 21 18 17 42 42 H 1.08003 * 120.09099 * 179.76981 * 22 7 6 43 43 H 1.07992 * 119.91409 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6825 -2.0619 1.3949 6 6 2.1339 -2.7177 2.5207 7 6 2.8536 -2.0159 3.4927 8 6 3.3434 -2.7097 4.6952 9 6 3.1029 -4.0260 4.8588 10 6 3.5906 -4.7162 6.0547 11 8 4.2127 -4.1014 6.9009 12 7 3.3506 -6.0324 6.2181 13 6 3.8381 -6.7227 7.4147 14 6 3.4335 -8.1970 7.3532 15 6 3.9432 -8.9182 8.6027 16 1 4.9671 -8.6470 8.8599 17 6 2.9697 -8.8536 9.7914 18 6 3.3427 -10.3183 10.0751 19 1 4.2018 -10.4313 10.7364 20 8 2.2312 -11.1266 10.4666 21 6 3.6944 -10.4357 8.5827 22 6 3.1009 -0.6506 3.3194 23 6 2.6388 -0.0078 2.1904 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5137 -0.8900 26 1 1.5614 2.4680 -1.2084 27 1 1.5878 2.4586 1.2243 28 1 1.1290 -2.6031 0.6417 29 1 1.9350 -3.7714 2.6497 30 1 3.8955 -2.1642 5.4462 31 1 2.5505 -4.5716 4.1081 32 1 2.8552 -6.5224 5.5434 33 1 4.9244 -6.6453 7.4617 34 1 3.4024 -6.2635 8.3020 35 1 2.3473 -8.2741 7.3065 36 1 3.8690 -8.6566 6.4660 37 1 3.2826 -8.1637 10.5751 38 1 1.9292 -8.7173 9.4967 39 1 2.0051 -11.0570 11.4041 40 1 2.8520 -10.7318 7.9575 41 1 4.5921 -11.0227 8.3891 42 1 3.6529 -0.1010 4.0676 43 1 2.8294 1.0465 2.0549 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:32 Heat of formation + Delta-G solvation = -56.251718 kcal Electronic energy + Delta-G solvation = -22846.889131 eV Core-core repulsion = 19245.349110 eV Total energy + Delta-G solvation = -3601.540021 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.151 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.94642 -40.61752 -40.20109 -37.94196 -36.83262 -35.59433 -35.08566 -32.20853 -32.01229 -31.04673 -27.39795 -26.79260 -25.74683 -24.11235 -23.68134 -22.65897 -21.97407 -20.65105 -20.36281 -18.70253 -18.57161 -18.28322 -17.23708 -16.89748 -16.69065 -16.41736 -16.32752 -16.23168 -15.83522 -15.42793 -15.23113 -15.17806 -14.79753 -14.49740 -14.17768 -14.01920 -13.86405 -13.53287 -13.47806 -13.36445 -12.95109 -12.76280 -12.53739 -12.27831 -12.13412 -12.06207 -11.75997 -11.65413 -11.36232 -11.28240 -10.94533 -10.72366 -10.65626 -10.09238 -10.06651 -9.30616 -5.00952 -0.58521 0.30828 0.88564 1.22328 1.54112 1.91476 2.18348 2.29928 2.75320 3.18341 3.29866 3.40764 3.50147 3.52178 3.62695 3.68456 3.69827 3.84991 3.88450 3.98974 4.09208 4.13177 4.21733 4.25041 4.28638 4.39953 4.47346 4.48737 4.61628 4.73668 4.75160 4.80580 4.86222 4.86748 4.92667 5.01213 5.03278 5.09130 5.16039 5.31546 5.37290 5.38666 5.43368 5.55687 5.81044 6.32861 6.50295 6.67172 7.25562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.077 4.077 3 Si 0.686 3.314 4 C -0.106 4.106 5 C -0.094 4.094 6 C -0.100 4.100 7 C -0.072 4.072 8 C -0.017 4.017 9 C -0.214 4.214 10 C 0.546 3.454 11 O -0.544 6.544 12 N -0.728 5.728 13 C 0.119 3.881 14 C -0.119 4.119 15 C -0.107 4.107 16 H 0.097 0.903 17 C -0.167 4.167 18 C 0.073 3.927 19 H 0.082 0.918 20 O -0.561 6.561 21 C -0.125 4.125 22 C -0.088 4.088 23 C -0.120 4.120 24 H 0.376 0.624 25 H 0.120 0.880 26 H -0.256 1.256 27 H -0.260 1.260 28 H 0.130 0.870 29 H 0.130 0.870 30 H 0.138 0.862 31 H 0.130 0.870 32 H 0.402 0.598 33 H 0.069 0.931 34 H 0.069 0.931 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.070 0.930 38 H 0.090 0.910 39 H 0.379 0.621 40 H 0.091 0.909 41 H 0.075 0.925 42 H 0.134 0.866 43 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.205 -1.262 -0.601 1.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.187 4.187 3 Si 0.588 3.412 4 C -0.106 4.106 5 C -0.112 4.112 6 C -0.118 4.118 7 C -0.072 4.072 8 C -0.036 4.036 9 C -0.234 4.234 10 C 0.336 3.664 11 O -0.423 6.423 12 N -0.379 5.379 13 C -0.004 4.004 14 C -0.157 4.157 15 C -0.126 4.126 16 H 0.115 0.885 17 C -0.204 4.204 18 C 0.014 3.986 19 H 0.100 0.900 20 O -0.367 6.367 21 C -0.162 4.162 22 C -0.106 4.106 23 C -0.138 4.138 24 H 0.224 0.776 25 H 0.138 0.862 26 H -0.181 1.181 27 H -0.185 1.185 28 H 0.148 0.852 29 H 0.148 0.852 30 H 0.156 0.844 31 H 0.148 0.852 32 H 0.236 0.764 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.091 0.909 36 H 0.092 0.908 37 H 0.089 0.911 38 H 0.109 0.891 39 H 0.226 0.774 40 H 0.110 0.890 41 H 0.093 0.907 42 H 0.151 0.849 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.545 -0.479 -1.164 1.993 hybrid contribution -1.314 -0.345 0.829 1.592 sum 0.230 -0.824 -0.336 0.919 Atomic orbital electron populations 1.86614 1.17569 1.79986 1.49340 1.25071 0.84067 1.11133 0.98448 0.94922 0.91654 0.74404 0.80246 1.20460 0.98724 0.94901 0.96554 1.20980 0.98856 0.93749 0.97637 1.21471 0.96855 1.00086 0.93390 1.19077 0.99579 0.93866 0.94701 1.22411 0.92903 0.94052 0.94253 1.22903 1.05691 0.96138 0.98697 1.18340 0.79621 0.81834 0.86652 1.90837 1.40835 1.66145 1.44476 1.45893 1.58237 1.09607 1.24178 1.21379 0.99774 0.91588 0.87668 1.21748 1.01735 0.93748 0.98471 1.22245 0.99934 0.95431 0.94972 0.88472 1.23792 1.00457 0.97665 0.98524 1.23350 0.89089 0.89796 0.96319 0.90005 1.86529 1.50582 1.68459 1.31123 1.23123 1.02234 0.95633 0.95230 1.21353 0.98483 0.93371 0.97404 1.21027 0.98720 0.99873 0.94165 0.77586 0.86246 1.18141 1.18482 0.85249 0.85242 0.84412 0.85220 0.76392 0.91277 0.91275 0.90887 0.90796 0.91095 0.89125 0.77353 0.89044 0.90655 0.84854 0.85156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.42 12.83 -35.23 -0.45 -0.88 16 2 C -0.08 0.06 2.80 36.01 0.10 0.16 16 3 Si 0.69 -0.91 29.87 -169.99 -5.08 -5.99 16 4 C -0.11 0.05 5.36 -104.50 -0.56 -0.51 16 5 C -0.09 0.03 9.66 -39.65 -0.38 -0.35 16 6 C -0.10 0.06 9.41 -39.11 -0.37 -0.31 16 7 C -0.07 0.00 5.87 -105.06 -0.62 -0.61 16 8 C -0.02 -0.01 9.46 -37.15 -0.35 -0.36 16 9 C -0.21 0.02 9.41 -37.50 -0.35 -0.34 16 10 C 0.55 1.22 7.74 -12.96 -0.10 1.12 16 11 O -0.54 -3.44 16.23 5.19 0.08 -3.35 16 12 N -0.73 0.35 5.55 -61.70 -0.34 0.01 16 13 C 0.12 -0.05 5.66 -4.04 -0.02 -0.08 16 14 C -0.12 0.27 5.16 -26.73 -0.14 0.13 16 15 C -0.11 0.19 3.65 -89.80 -0.33 -0.13 16 16 H 0.10 -0.21 8.13 -51.93 -0.42 -0.63 16 17 C -0.17 0.20 7.46 -25.92 -0.19 0.01 16 18 C 0.07 -0.05 5.21 -25.92 -0.14 -0.18 16 19 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 20 O -0.56 -0.45 13.67 -35.23 -0.48 -0.94 16 21 C -0.12 0.11 7.47 -25.92 -0.19 -0.08 16 22 C -0.09 0.05 9.80 -39.11 -0.38 -0.33 16 23 C -0.12 0.10 8.65 -39.65 -0.34 -0.24 16 24 H 0.38 -0.72 8.70 45.56 0.40 -0.33 16 25 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 26 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 27 H -0.26 -0.15 7.00 56.52 0.40 0.25 16 28 H 0.13 -0.13 8.06 -52.49 -0.42 -0.56 16 29 H 0.13 -0.33 6.17 -52.48 -0.32 -0.65 16 30 H 0.14 0.12 7.52 -52.49 -0.39 -0.27 16 31 H 0.13 -0.36 6.07 -52.49 -0.32 -0.68 16 32 H 0.40 -1.32 8.45 -40.82 -0.35 -1.67 16 33 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 -0.17 7.84 -51.93 -0.41 -0.58 16 36 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 39 H 0.38 -1.18 9.12 45.56 0.42 -0.77 16 40 H 0.09 -0.02 8.10 -51.93 -0.42 -0.44 16 41 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.13 -0.30 8.06 -52.48 -0.42 -0.72 16 43 H 0.13 -0.31 4.81 -52.49 -0.25 -0.56 16 LS Contribution 360.79 15.07 5.44 5.44 Total: 0.00 -8.91 360.79 -10.68 -19.60 By element: Atomic # 1 Polarization: -6.30 SS G_CDS: -5.48 Total: -11.78 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -4.37 Total: -2.10 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.34 Total: 0.01 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.85 Total: -5.17 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.08 Total: -5.99 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -8.91 -10.68 -19.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.655 kcal (2) G-P(sol) polarization free energy of solvation -8.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds