Wall clock time and date at job start Tue Mar 9 2021 13:15:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.37818 * 119.94230 * 14.72415 * 4 2 1 6 6 C 1.39674 * 119.87934 * 179.75176 * 5 4 2 7 7 C 1.47723 * 120.11632 * 180.29413 * 6 5 4 8 8 O 1.21571 * 120.00099 * 0.24969 * 7 6 5 9 9 N 1.34774 * 120.00205 * 180.24694 * 7 6 5 10 10 C 1.46494 * 120.00370 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47450 * 179.97438 * 10 9 7 12 12 C 1.52993 * 109.47403 * 180.02562 * 11 10 9 13 13 H 1.09001 * 112.85189 * 43.80491 * 12 11 10 14 14 C 1.53787 * 113.61642 * 175.00318 * 12 11 10 15 15 C 1.53780 * 87.08176 * 139.98256 * 14 12 11 16 16 H 1.09001 * 113.61722 * 89.20089 * 15 14 12 17 17 O 1.42901 * 113.61393 * 220.02029 * 15 14 12 18 18 C 1.53783 * 113.61551 * 272.49981 * 12 11 10 19 19 C 1.39625 * 119.76372 * 0.54289 * 6 5 4 20 20 C 1.37859 * 119.87912 * 359.72626 * 19 6 5 21 21 C 1.38630 * 120.12126 * 359.97438 * 20 19 6 22 22 F 1.35101 * 119.87938 * 180.02562 * 21 20 19 23 23 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 24 24 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 25 25 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 26 26 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 27 27 H 1.07999 * 120.05812 * 359.97438 * 5 4 2 28 28 H 0.97001 * 119.99539 * 0.02562 * 9 7 6 29 29 H 1.09000 * 109.47634 * 300.00756 * 10 9 7 30 30 H 1.09000 * 109.46847 * 60.00279 * 10 9 7 31 31 H 1.08997 * 109.47342 * 300.00468 * 11 10 9 32 32 H 1.09000 * 109.46798 * 60.00334 * 11 10 9 33 33 H 1.09001 * 113.60994 * 254.52890 * 14 12 11 34 34 H 1.08995 * 113.61545 * 25.43098 * 14 12 11 35 35 H 0.96695 * 114.00204 * 179.97438 * 17 15 14 36 36 H 1.08993 * 113.61578 * 334.56632 * 18 12 11 37 37 H 1.09000 * 113.61506 * 105.46954 * 18 12 11 38 38 H 1.08005 * 120.05803 * 179.70707 * 19 6 5 39 39 H 1.08009 * 119.93819 * 180.02562 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0716 -1.4901 1.9737 6 6 1.5399 -2.1522 3.1110 7 6 0.6246 -2.9944 3.9078 8 8 -0.5374 -3.1159 3.5716 9 7 1.0776 -3.6282 5.0076 10 6 0.1698 -4.4630 5.7982 11 6 0.9299 -5.0629 6.9828 12 6 -0.0180 -5.9352 7.8081 13 1 -0.6515 -6.5727 7.1913 14 6 0.6775 -6.6846 8.9569 15 6 -0.5617 -6.3660 9.8100 16 1 -1.3443 -7.1216 9.7426 17 8 -0.2517 -6.0070 11.1580 18 6 -0.7889 -5.1569 8.8873 19 6 2.8749 -2.0109 3.4948 20 6 3.7249 -1.2240 2.7472 21 6 3.2565 -0.5741 1.6159 22 9 4.0938 0.1953 0.8865 23 1 -0.3932 0.4418 0.7651 24 1 1.7923 -0.5139 -0.8900 25 1 1.5615 2.4679 -1.2085 26 1 1.5881 2.4585 1.2242 27 1 0.0387 -1.5919 1.6753 28 1 2.0047 -3.5310 5.2760 29 1 -0.6558 -3.8541 6.1665 30 1 -0.2215 -5.2662 5.1738 31 1 1.7553 -5.6719 6.6141 32 1 1.3216 -4.2599 7.6072 33 1 0.8134 -7.7489 8.7648 34 1 1.5868 -6.1974 9.3087 35 1 -1.0269 -5.8051 11.6995 36 1 -0.2805 -4.2521 9.2201 37 1 -1.8367 -4.9879 8.6391 38 1 3.2408 -2.5169 4.3761 39 1 4.7578 -1.1144 3.0431 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:42 Heat of formation + Delta-G solvation = -114.413703 kcal Electronic energy + Delta-G solvation = -23010.240112 eV Core-core repulsion = 19220.487782 eV Total energy + Delta-G solvation = -3789.752330 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -50.28036 -41.44431 -40.40560 -39.71645 -37.83948 -36.85754 -35.68976 -33.08615 -32.19663 -31.11696 -27.25018 -26.70246 -26.11165 -24.28857 -23.27204 -22.60981 -21.52513 -20.42991 -19.40506 -18.63659 -18.34528 -18.04619 -17.81330 -17.06263 -16.83234 -16.71137 -16.31844 -16.07783 -15.78408 -15.40176 -15.32247 -15.15157 -15.00977 -14.36043 -14.24167 -14.16874 -13.92165 -13.43141 -13.38334 -13.26975 -12.87679 -12.68295 -12.48494 -12.46090 -11.99246 -11.95235 -11.67546 -11.30056 -11.14163 -11.02610 -10.66334 -10.30430 -10.03751 -9.74531 -4.85252 -0.50881 0.01022 1.15842 1.49701 1.59517 1.85366 2.00869 2.57456 2.94731 3.14827 3.30433 3.32406 3.51795 3.60384 3.63993 3.66641 3.80370 3.98322 4.01007 4.08404 4.12384 4.26569 4.39010 4.40976 4.57376 4.62511 4.69972 4.79237 4.82400 4.85218 4.89019 4.95896 4.99268 5.02733 5.08696 5.14001 5.27386 5.32274 5.50404 5.61522 6.31441 6.40298 6.87246 7.07118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.080 4.080 3 Si 0.746 3.254 4 C -0.163 4.163 5 C -0.041 4.041 6 C -0.154 4.154 7 C 0.555 3.445 8 O -0.581 6.581 9 N -0.710 5.710 10 C 0.121 3.879 11 C -0.109 4.109 12 C -0.101 4.101 13 H 0.101 0.899 14 C -0.126 4.126 15 C 0.066 3.934 16 H 0.091 0.909 17 O -0.584 6.584 18 C -0.165 4.165 19 C -0.047 4.047 20 C -0.141 4.141 21 C 0.119 3.881 22 F -0.100 7.100 23 H 0.387 0.613 24 H 0.134 0.866 25 H -0.290 1.290 26 H -0.285 1.285 27 H 0.134 0.866 28 H 0.417 0.583 29 H 0.057 0.943 30 H 0.061 0.939 31 H 0.087 0.913 32 H 0.080 0.920 33 H 0.079 0.921 34 H 0.085 0.915 35 H 0.393 0.607 36 H 0.084 0.916 37 H 0.071 0.929 38 H 0.175 0.825 39 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.871 -1.594 4.112 7.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.189 4.189 3 Si 0.650 3.350 4 C -0.164 4.164 5 C -0.060 4.060 6 C -0.157 4.157 7 C 0.343 3.657 8 O -0.463 6.463 9 N -0.363 5.363 10 C -0.003 4.003 11 C -0.146 4.146 12 C -0.120 4.120 13 H 0.119 0.881 14 C -0.164 4.164 15 C 0.007 3.993 16 H 0.109 0.891 17 O -0.392 6.392 18 C -0.203 4.203 19 C -0.065 4.065 20 C -0.159 4.159 21 C 0.099 3.901 22 F -0.078 7.078 23 H 0.236 0.764 24 H 0.151 0.849 25 H -0.217 1.217 26 H -0.211 1.211 27 H 0.151 0.849 28 H 0.255 0.745 29 H 0.076 0.924 30 H 0.079 0.921 31 H 0.106 0.894 32 H 0.098 0.902 33 H 0.097 0.903 34 H 0.104 0.896 35 H 0.242 0.758 36 H 0.103 0.897 37 H 0.089 0.911 38 H 0.192 0.808 39 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 5.561 -1.260 3.133 6.506 hybrid contribution -1.658 0.114 0.521 1.742 sum 3.903 -1.146 3.654 5.468 Atomic orbital electron populations 1.86573 1.17978 1.80462 1.50303 1.25084 0.83957 1.11566 0.98255 0.94106 0.91532 0.71847 0.77513 1.20314 0.93577 1.02518 1.00032 1.20879 1.00417 0.92416 0.92245 1.19962 0.95385 1.02353 0.98042 1.18445 0.86901 0.79437 0.80872 1.90797 1.19892 1.64643 1.70919 1.45801 1.15357 1.48792 1.26302 1.21398 0.92827 0.93722 0.92333 1.21676 0.98322 0.99565 0.95077 1.22215 0.97680 0.97624 0.94508 0.88100 1.23131 0.97555 1.01341 0.94362 1.23513 0.98540 0.96587 0.80660 0.89138 1.86481 1.38464 1.90852 1.23370 1.23754 1.01223 0.98429 0.96888 1.21537 0.90298 0.95356 0.99330 1.21469 1.03226 0.97709 0.93541 1.17801 0.86790 0.93394 0.92086 1.91200 1.69428 1.71185 1.76022 0.76366 0.84873 1.21744 1.21085 0.84850 0.74458 0.92414 0.92103 0.89398 0.90165 0.90263 0.89622 0.75757 0.89720 0.91052 0.80817 0.80133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.67 11.64 -148.98 -1.73 -4.41 16 2 C -0.08 -0.13 2.96 71.24 0.21 0.08 16 3 Si 0.75 0.91 29.57 68.60 2.03 2.94 16 4 C -0.16 -0.15 5.13 -19.86 -0.10 -0.25 16 5 C -0.04 -0.14 8.78 22.52 0.20 0.06 16 6 C -0.15 -0.09 5.87 -20.09 -0.12 -0.21 16 7 C 0.56 2.43 7.77 86.75 0.67 3.10 16 8 O -0.58 -8.12 16.34 -3.94 -0.06 -8.19 16 9 N -0.71 2.16 5.51 -466.11 -2.57 -0.40 16 10 C 0.12 -0.29 5.66 86.38 0.49 0.20 16 11 C -0.11 0.77 5.16 30.59 0.16 0.93 16 12 C -0.10 0.53 3.65 -10.27 -0.04 0.49 16 13 H 0.10 -0.57 8.13 -2.39 -0.02 -0.59 16 14 C -0.13 0.41 7.47 31.12 0.23 0.64 16 15 C 0.07 -0.14 5.21 31.12 0.16 0.02 16 16 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 17 O -0.58 -0.56 13.67 -148.98 -2.04 -2.60 16 18 C -0.17 0.56 7.46 31.12 0.23 0.79 16 19 C -0.05 0.33 9.54 22.51 0.21 0.54 16 20 C -0.14 1.02 10.01 22.27 0.22 1.24 16 21 C 0.12 -0.32 6.67 22.47 0.15 -0.17 16 22 F -0.10 0.38 13.71 44.97 0.62 1.00 16 23 H 0.39 -0.11 8.42 -74.05 -0.62 -0.73 16 24 H 0.13 -0.02 7.96 -2.38 -0.02 -0.04 16 25 H -0.29 -2.28 7.11 99.48 0.71 -1.57 16 26 H -0.28 -1.65 7.11 99.48 0.71 -0.94 16 27 H 0.13 0.92 6.65 -2.91 -0.02 0.90 16 28 H 0.42 -4.32 6.50 -92.71 -0.60 -4.92 16 29 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 30 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 31 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 32 H 0.08 -0.63 7.84 -2.39 -0.02 -0.65 16 33 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 34 H 0.09 -0.17 8.10 -2.39 -0.02 -0.18 16 35 H 0.39 -2.62 9.12 -74.06 -0.68 -3.30 16 36 H 0.08 -0.18 7.90 -2.39 -0.02 -0.20 16 37 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 38 H 0.17 -2.58 6.40 -2.91 -0.02 -2.59 16 39 H 0.18 -2.41 8.06 -2.91 -0.02 -2.43 16 Total: 0.00 -21.42 329.94 -1.83 -23.25 By element: Atomic # 1 Polarization: -18.31 SS G_CDS: -0.76 Total: -19.07 kcal Atomic # 6 Polarization: 4.78 SS G_CDS: 2.69 Total: 7.47 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -2.57 Total: -0.40 kcal Atomic # 8 Polarization: -11.36 SS G_CDS: -3.84 Total: -15.19 kcal Atomic # 9 Polarization: 0.38 SS G_CDS: 0.62 Total: 1.00 kcal Atomic # 14 Polarization: 0.91 SS G_CDS: 2.03 Total: 2.94 kcal Total: -21.42 -1.83 -23.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.159 kcal (2) G-P(sol) polarization free energy of solvation -21.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.254 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds