Wall clock time and date at job start Tue Mar 9 2021 13:15:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86295 * 109.47147 * 2 1 4 4 C 1.50700 * 109.47150 * 120.00380 * 2 1 3 5 5 C 1.35080 * 126.07185 * 255.02303 * 4 2 1 6 6 N 1.35044 * 107.97866 * 179.77443 * 5 4 2 7 7 C 1.46498 * 125.93467 * 180.19158 * 6 5 4 8 8 C 1.50699 * 109.47314 * 124.99990 * 7 6 5 9 9 O 1.21289 * 120.00069 * 0.02562 * 8 7 6 10 10 N 1.34768 * 120.00324 * 180.02562 * 8 7 6 11 11 C 1.46502 * 120.00440 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.47371 * 179.97438 * 11 10 8 13 13 C 1.52996 * 109.47043 * 180.02562 * 12 11 10 14 14 H 1.09004 * 112.85285 * 316.19681 * 13 12 11 15 15 C 1.53784 * 113.61486 * 87.50756 * 13 12 11 16 16 C 1.53783 * 87.08223 * 139.98034 * 15 13 12 17 17 H 1.09001 * 113.61446 * 89.10975 * 16 15 13 18 18 O 1.42896 * 113.68823 * 220.01096 * 16 15 13 19 19 C 1.53783 * 113.61375 * 185.00306 * 13 12 11 20 20 N 1.40078 * 108.13649 * 0.22551 * 6 5 4 21 21 C 1.31621 * 108.10703 * 0.02562 * 20 6 5 22 22 C 1.48417 * 126.03644 * 179.97438 * 21 20 6 23 23 C 1.39328 * 120.11997 * 144.74872 * 22 21 20 24 24 C 1.38022 * 119.87922 * 179.69682 * 23 22 21 25 25 C 1.38320 * 120.11788 * 0.58574 * 24 23 22 26 26 C 1.38320 * 120.24260 * 359.71424 * 25 24 23 27 27 C 1.38022 * 120.11887 * 359.97438 * 26 25 24 28 28 H 0.96697 * 114.00193 * 299.99972 * 1 2 3 29 29 H 1.08998 * 109.46721 * 240.00490 * 2 1 3 30 30 H 1.48497 * 110.00381 * 300.00302 * 3 2 1 31 31 H 1.48508 * 109.99721 * 61.32142 * 3 2 1 32 32 H 1.08002 * 126.01584 * 0.04312 * 5 4 2 33 33 H 1.09000 * 109.47109 * 245.00303 * 7 6 5 34 34 H 1.09003 * 109.46856 * 5.00208 * 7 6 5 35 35 H 0.97009 * 119.99833 * 359.97438 * 10 8 7 36 36 H 1.08991 * 109.47081 * 300.00090 * 11 10 8 37 37 H 1.09003 * 109.46798 * 60.00077 * 11 10 8 38 38 H 1.09000 * 109.47237 * 300.00508 * 12 11 10 39 39 H 1.09003 * 109.46788 * 60.00449 * 12 11 10 40 40 H 1.09001 * 113.61141 * 254.52766 * 15 13 12 41 41 H 1.09000 * 113.61014 * 25.42880 * 15 13 12 42 42 H 0.96704 * 113.99385 * 277.52967 * 18 16 15 43 43 H 1.08996 * 113.61478 * 334.56652 * 19 13 12 44 44 H 1.08995 * 113.61770 * 105.38591 * 19 13 12 45 45 H 1.07998 * 120.05821 * 359.97438 * 23 22 21 46 46 H 1.07998 * 119.94198 * 180.29897 * 24 23 22 47 47 H 1.08001 * 119.87953 * 179.74065 * 25 24 23 48 48 H 1.08003 * 119.93732 * 180.02562 * 26 25 24 49 49 H 1.07997 * 120.06226 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4625 -0.1250 2.3258 6 7 2.7836 -1.0988 3.2046 7 6 3.3833 -0.9005 4.5264 8 6 2.5246 -1.5637 5.5723 9 8 1.5116 -2.1453 5.2456 10 7 2.8821 -1.5106 6.8705 11 6 2.0471 -2.1549 7.8873 12 6 2.6734 -1.9478 9.2678 13 6 1.8016 -2.6212 10.3296 14 1 0.7375 -2.4357 10.1834 15 6 2.1448 -4.1025 10.5596 16 6 1.9307 -3.8379 12.0593 17 1 0.9015 -3.9864 12.3863 18 8 2.8806 -4.4962 12.8997 19 6 2.2789 -2.3683 11.7695 20 7 2.4445 -2.3317 2.6325 21 6 1.9337 -2.1031 1.4411 22 6 1.4420 -3.1310 0.4901 23 6 0.3404 -2.8639 -0.3201 24 6 -0.1089 -3.8210 -1.2072 25 6 0.5250 -5.0480 -1.2842 26 6 1.6152 -5.3208 -0.4778 27 6 2.0768 -4.3685 0.4083 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4679 -1.2084 31 1 1.5879 2.4585 1.2243 32 1 2.6016 0.9356 2.4746 33 1 4.3805 -1.3402 4.5427 34 1 3.4533 0.1667 4.7371 35 1 3.6925 -1.0457 7.1318 36 1 1.0500 -1.7150 7.8707 37 1 1.9769 -3.2221 7.6770 38 1 3.6704 -2.3880 9.2842 39 1 2.7438 -0.8806 9.4784 40 1 1.4175 -4.7910 10.1295 41 1 3.1733 -4.3572 10.3036 42 1 2.6670 -5.4208 13.0856 43 1 3.3439 -2.1491 11.8443 44 1 1.6607 -1.6559 12.3156 45 1 -0.1583 -1.9080 -0.2572 46 1 -0.9597 -3.6133 -1.8391 47 1 0.1676 -5.7957 -1.9768 48 1 2.1067 -6.2803 -0.5423 49 1 2.9283 -4.5823 1.0372 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:45 Heat of formation + Delta-G solvation = 19.241386 kcal Electronic energy + Delta-G solvation = -30807.599947 eV Core-core repulsion = 26510.954212 eV Total energy + Delta-G solvation = -4296.645735 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.42835 -40.86040 -40.32222 -39.55693 -37.85699 -36.88470 -35.66182 -34.74234 -32.42084 -31.94605 -31.52122 -31.15051 -28.74462 -26.84595 -26.18623 -25.41820 -23.88651 -23.27713 -22.74895 -21.86170 -21.43408 -20.86067 -20.56504 -18.81902 -18.59079 -18.23856 -17.68503 -17.36250 -16.98430 -16.71896 -16.49226 -16.26864 -16.10977 -15.68129 -15.54840 -15.51723 -15.35691 -15.22094 -14.74654 -14.43024 -14.32015 -14.10953 -13.98902 -13.73624 -13.55774 -13.51725 -13.43082 -13.27866 -12.80616 -12.58188 -12.49361 -12.26882 -12.12982 -11.96675 -11.81508 -11.63080 -11.48826 -11.34187 -11.18741 -10.79662 -10.55031 -10.38226 -10.22832 -9.65794 -9.61291 -9.13120 -4.95458 0.29101 0.72442 0.83793 1.22734 1.35696 1.45297 1.57400 1.86909 1.99964 2.00842 3.11459 3.13749 3.30244 3.35535 3.45185 3.46274 3.50151 3.63497 3.64584 3.75030 3.83691 3.84870 3.95210 4.11874 4.16758 4.21423 4.25748 4.29253 4.42527 4.46822 4.52787 4.54631 4.66070 4.69287 4.70766 4.79395 4.80580 4.85889 4.90660 4.96174 4.96969 5.10980 5.18887 5.24118 5.32448 5.38983 5.47893 5.79353 5.82035 5.85494 5.88049 6.27022 6.28021 6.50815 6.64175 6.73016 7.05262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.036 4.036 3 Si 0.686 3.314 4 C -0.248 4.248 5 C 0.061 3.939 6 N -0.358 5.358 7 C 0.116 3.884 8 C 0.497 3.503 9 O -0.504 6.504 10 N -0.731 5.731 11 C 0.122 3.878 12 C -0.118 4.118 13 C -0.107 4.107 14 H 0.097 0.903 15 C -0.167 4.167 16 C 0.074 3.926 17 H 0.082 0.918 18 O -0.561 6.561 19 C -0.124 4.124 20 N -0.249 5.249 21 C 0.134 3.866 22 C -0.021 4.021 23 C -0.099 4.099 24 C -0.125 4.125 25 C -0.112 4.112 26 C -0.127 4.127 27 C -0.091 4.091 28 H 0.375 0.625 29 H 0.116 0.884 30 H -0.256 1.256 31 H -0.260 1.260 32 H 0.178 0.822 33 H 0.119 0.881 34 H 0.128 0.872 35 H 0.402 0.598 36 H 0.068 0.932 37 H 0.070 0.930 38 H 0.073 0.927 39 H 0.074 0.926 40 H 0.070 0.930 41 H 0.091 0.909 42 H 0.379 0.621 43 H 0.091 0.909 44 H 0.075 0.925 45 H 0.153 0.847 46 H 0.124 0.876 47 H 0.122 0.878 48 H 0.124 0.876 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.277 3.403 2.963 6.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.147 4.147 3 Si 0.587 3.413 4 C -0.260 4.260 5 C -0.084 4.084 6 N -0.140 5.140 7 C -0.009 4.009 8 C 0.280 3.720 9 O -0.377 6.377 10 N -0.385 5.385 11 C -0.002 4.002 12 C -0.156 4.156 13 C -0.126 4.126 14 H 0.115 0.885 15 C -0.204 4.204 16 C 0.015 3.985 17 H 0.100 0.900 18 O -0.367 6.367 19 C -0.162 4.162 20 N -0.070 5.070 21 C -0.032 4.032 22 C -0.023 4.023 23 C -0.118 4.118 24 C -0.143 4.143 25 C -0.131 4.131 26 C -0.145 4.145 27 C -0.111 4.111 28 H 0.223 0.777 29 H 0.134 0.866 30 H -0.180 1.180 31 H -0.185 1.185 32 H 0.195 0.805 33 H 0.137 0.863 34 H 0.146 0.854 35 H 0.236 0.764 36 H 0.087 0.913 37 H 0.088 0.912 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.089 0.911 41 H 0.109 0.891 42 H 0.227 0.773 43 H 0.110 0.890 44 H 0.093 0.907 45 H 0.171 0.829 46 H 0.142 0.858 47 H 0.140 0.860 48 H 0.142 0.858 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.085 3.262 3.194 6.126 hybrid contribution -1.118 0.073 0.332 1.168 sum 2.967 3.335 3.526 5.688 Atomic orbital electron populations 1.86492 1.18364 1.79185 1.49455 1.24244 0.83163 1.10093 0.97168 0.95158 0.91422 0.74244 0.80428 1.20366 1.13158 0.93234 0.99199 1.22279 1.00289 0.95389 0.90424 1.47840 1.48777 1.04424 1.12915 1.21508 0.97243 1.03450 0.78734 1.20548 0.86733 0.81424 0.83316 1.90847 1.25087 1.41201 1.80541 1.45918 1.28537 1.57764 1.06259 1.21386 0.94314 0.98367 0.86100 1.21744 0.99501 1.01657 0.92705 1.22241 1.00202 0.96030 0.94151 0.88520 1.23793 1.02885 0.96536 0.97222 1.23339 0.92423 0.93954 0.88820 0.90023 1.86527 1.50396 1.29177 1.70565 1.23118 1.02809 0.95125 0.95119 1.77796 1.19252 1.01730 1.08200 1.20635 0.98098 0.92355 0.92117 1.17784 0.96741 0.92046 0.95717 1.21894 0.95021 1.00946 0.93967 1.21131 1.00338 0.93672 0.99154 1.21292 0.95779 0.97084 0.98903 1.21078 0.97359 0.99338 0.96711 1.21209 0.99658 0.92318 0.97876 0.77717 0.86594 1.18005 1.18546 0.80522 0.86308 0.85409 0.76387 0.91334 0.91179 0.90800 0.90776 0.91097 0.89098 0.77306 0.89018 0.90661 0.82940 0.85781 0.86013 0.85840 0.85900 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.70 10.12 -35.23 -0.36 -1.05 16 2 C -0.04 -0.02 1.99 36.01 0.07 0.06 16 3 Si 0.69 -0.94 30.81 -169.99 -5.24 -6.18 16 4 C -0.25 -0.47 5.34 -104.76 -0.56 -1.02 16 5 C 0.06 0.01 9.96 -17.26 -0.17 -0.16 16 6 N -0.36 -0.62 3.40 -62.58 -0.21 -0.83 16 7 C 0.12 -0.27 6.99 -5.20 -0.04 -0.30 16 8 C 0.50 0.43 7.86 -10.99 -0.09 0.34 16 9 O -0.50 -3.28 15.70 5.55 0.09 -3.19 16 10 N -0.73 1.62 5.56 -60.30 -0.33 1.28 16 11 C 0.12 -0.15 5.67 -4.04 -0.02 -0.17 16 12 C -0.12 0.37 5.17 -26.73 -0.14 0.23 16 13 C -0.11 0.24 3.65 -89.81 -0.33 -0.09 16 14 H 0.10 -0.23 8.13 -51.93 -0.42 -0.65 16 15 C -0.17 0.24 7.47 -25.92 -0.19 0.04 16 16 C 0.07 -0.06 5.21 -25.92 -0.14 -0.20 16 17 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 18 O -0.56 -0.33 13.67 -35.23 -0.48 -0.81 16 19 C -0.12 0.16 7.47 -25.92 -0.19 -0.03 16 20 N -0.25 -1.34 11.63 33.43 0.39 -0.95 16 21 C 0.13 0.62 6.74 -82.78 -0.56 0.07 16 22 C -0.02 -0.10 5.80 -104.89 -0.61 -0.71 16 23 C -0.10 -0.40 8.93 -39.26 -0.35 -0.75 16 24 C -0.12 -0.37 10.03 -39.63 -0.40 -0.76 16 25 C -0.11 -0.28 10.04 -39.52 -0.40 -0.67 16 26 C -0.13 -0.36 10.03 -39.63 -0.40 -0.75 16 27 C -0.09 -0.37 9.75 -39.26 -0.38 -0.76 16 28 H 0.37 -0.42 8.70 45.56 0.40 -0.03 16 29 H 0.12 0.07 7.82 -51.93 -0.41 -0.34 16 30 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 31 H -0.26 0.06 6.99 56.52 0.40 0.45 16 32 H 0.18 -0.60 6.33 -52.49 -0.33 -0.93 16 33 H 0.12 -0.53 8.14 -51.93 -0.42 -0.96 16 34 H 0.13 -0.82 8.07 -51.93 -0.42 -1.24 16 35 H 0.40 -2.27 8.47 -40.82 -0.35 -2.61 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 37 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 38 H 0.07 -0.24 7.84 -51.93 -0.41 -0.64 16 39 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 40 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.09 -0.07 7.89 -51.93 -0.41 -0.48 16 42 H 0.38 -1.24 9.12 45.56 0.42 -0.83 16 43 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 44 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.15 0.57 4.51 -52.49 -0.24 0.33 16 46 H 0.12 0.14 8.06 -52.49 -0.42 -0.28 16 47 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 48 H 0.12 0.10 8.06 -52.48 -0.42 -0.33 16 49 H 0.12 0.45 8.06 -52.49 -0.42 0.02 16 LS Contribution 407.30 15.07 6.14 6.14 Total: 0.00 -12.60 407.30 -11.34 -23.93 By element: Atomic # 1 Polarization: -6.23 SS G_CDS: -6.44 Total: -12.67 kcal Atomic # 6 Polarization: -0.76 SS G_CDS: -4.88 Total: -5.65 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: -0.16 Total: -0.51 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -0.75 Total: -5.06 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.24 Total: -6.18 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -12.60 -11.34 -23.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.173 kcal (2) G-P(sol) polarization free energy of solvation -12.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.932 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds