Wall clock time and date at job start Tue Mar 9 2021 13:15:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86310 * 109.47036 * 2 1 4 4 C 1.50703 * 109.47384 * 119.99877 * 2 1 3 5 5 C 1.34832 * 125.65064 * 65.25797 * 4 2 1 6 6 C 1.40795 * 107.04954 * 180.13509 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.62775 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39922 * 119.95362 * 359.97438 * 8 7 6 10 10 C 1.36426 * 120.27884 * 179.97438 * 9 8 7 11 11 C 1.39880 * 120.18268 * 0.02799 * 10 9 8 12 12 C 1.47296 * 120.04118 * 179.97438 * 11 10 9 13 13 O 1.21620 * 119.99738 * 179.97438 * 12 11 10 14 14 N 1.34771 * 120.00379 * 0.02562 * 12 11 10 15 15 C 1.46499 * 120.00153 * 179.97438 * 14 12 11 16 16 C 1.53002 * 109.46862 * 180.02562 * 15 14 12 17 17 C 1.53006 * 109.46708 * 180.02562 * 16 15 14 18 18 H 1.08999 * 112.84711 * 316.19341 * 17 16 15 19 19 C 1.53774 * 113.61774 * 87.50411 * 17 16 15 20 20 C 1.53781 * 87.08480 * 139.97765 * 19 17 16 21 21 H 1.09002 * 113.61287 * 89.11159 * 20 19 17 22 22 O 1.42899 * 113.69193 * 220.00805 * 20 19 17 23 23 C 1.53782 * 113.61122 * 185.00241 * 17 16 15 24 24 C 1.40397 * 119.91102 * 359.97438 * 11 10 9 25 25 O 1.35679 * 120.14052 * 179.97438 * 24 11 10 26 26 C 1.38284 * 119.72192 * 359.70211 * 24 11 10 27 27 O 1.34226 * 125.65134 * 244.97269 * 4 2 1 28 28 H 0.96697 * 113.99670 * 299.99439 * 1 2 3 29 29 H 1.09005 * 109.47504 * 240.00193 * 2 1 3 30 30 H 1.48490 * 109.99973 * 178.68216 * 3 2 1 31 31 H 1.48505 * 109.99738 * 300.00379 * 3 2 1 32 32 H 1.08005 * 126.47500 * 0.02562 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.89704 * 6 5 4 34 34 H 1.07995 * 119.86085 * 0.02562 * 9 8 7 35 35 H 1.07995 * 119.90848 * 180.02562 * 10 9 8 36 36 H 0.97010 * 119.99935 * 0.02562 * 14 12 11 37 37 H 1.08994 * 109.47473 * 299.99765 * 15 14 12 38 38 H 1.08996 * 109.47262 * 60.00294 * 15 14 12 39 39 H 1.09006 * 109.47139 * 299.99820 * 16 15 14 40 40 H 1.08995 * 109.47625 * 60.00507 * 16 15 14 41 41 H 1.09001 * 113.61348 * 254.52685 * 19 17 16 42 42 H 1.09004 * 113.61678 * 25.43043 * 19 17 16 43 43 H 0.96703 * 113.99733 * 277.53017 * 22 20 19 44 44 H 1.09004 * 113.61687 * 334.55770 * 23 17 16 45 45 H 1.08997 * 113.61738 * 105.47096 * 23 17 16 46 46 H 0.96700 * 113.99674 * 90.00120 * 25 24 11 47 47 H 1.08001 * 120.09216 * 180.31452 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7611 -2.0190 1.5070 6 6 2.3804 -2.2628 2.7477 7 6 2.9082 -1.0784 3.1617 8 6 3.6583 -0.8543 4.4126 9 6 3.8792 -1.9177 5.2948 10 6 4.5722 -1.7181 6.4528 11 6 5.0666 -0.4477 6.7665 12 6 5.8140 -0.2357 8.0179 13 8 6.2438 0.8691 8.2897 14 7 6.0224 -1.2660 8.8613 15 6 6.7662 -1.0551 10.1057 16 6 6.8603 -2.3752 10.8735 17 6 7.6366 -2.1548 12.1734 18 1 8.5280 -1.5428 12.0355 19 6 6.7539 -1.7047 13.3494 20 6 7.5960 -2.6372 14.2361 21 1 8.4760 -2.1563 14.6633 22 8 6.8295 -3.3541 15.2059 23 6 7.8939 -3.4484 12.9641 24 6 4.8494 0.6248 5.8870 25 8 5.3264 1.8591 6.1869 26 6 4.1522 0.4168 4.7110 27 8 2.6272 -0.1464 2.2302 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5345 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 1.2453 -2.7430 0.8936 33 1 2.4312 -3.2078 3.2681 34 1 3.5002 -2.9007 5.0576 35 1 4.7396 -2.5432 7.1292 36 1 5.6804 -2.1475 8.6441 37 1 7.7694 -0.6981 9.8733 38 1 6.2496 -0.3150 10.7168 39 1 5.8571 -2.7327 11.1060 40 1 7.3771 -3.1150 10.2623 41 1 6.8632 -0.6491 13.5984 42 1 5.7125 -2.0132 13.2568 43 1 6.6390 -2.8490 16.0082 44 1 7.1642 -4.2336 12.7662 45 1 8.9236 -3.8006 12.9021 46 1 6.2193 2.0268 5.8557 47 1 3.9861 1.2365 4.0277 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:52 Heat of formation + Delta-G solvation = -87.604213 kcal Electronic energy + Delta-G solvation = -30462.681013 eV Core-core repulsion = 25965.964781 eV Total energy + Delta-G solvation = -4496.716232 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -43.76246 -41.52389 -40.53374 -39.59197 -38.13232 -37.83572 -36.75920 -35.56789 -34.28609 -33.60864 -31.71136 -31.24205 -30.34274 -27.24700 -26.79702 -25.72391 -24.25426 -24.07607 -22.75770 -22.37901 -21.91524 -21.32438 -20.54295 -19.75816 -18.85566 -18.55641 -18.36074 -17.68738 -17.50218 -17.27867 -16.77807 -16.54995 -16.42273 -16.17727 -16.00609 -15.79410 -15.49071 -15.37951 -15.12942 -14.81845 -14.37165 -14.22017 -14.16907 -14.04048 -13.89867 -13.65244 -13.52033 -13.48342 -13.36536 -12.88805 -12.77821 -12.75154 -12.53776 -12.13614 -12.07984 -11.84635 -11.76711 -11.28819 -11.15299 -10.85382 -10.75626 -10.69314 -10.61253 -10.10763 -9.98099 -9.03969 -5.08163 -0.80407 0.08866 0.63769 1.08911 1.38177 1.43684 1.72473 1.88230 1.98006 2.06855 2.62860 2.99714 3.17416 3.19640 3.33102 3.39326 3.50195 3.51571 3.62658 3.68836 3.82582 3.87420 3.88148 3.91776 4.00619 4.12906 4.19521 4.23896 4.27096 4.35174 4.47179 4.54263 4.60021 4.64606 4.72933 4.73656 4.75094 4.80471 4.85566 4.91418 4.97517 5.01159 5.06892 5.14535 5.15958 5.35410 5.35790 5.37635 5.44211 5.93569 6.34076 6.43369 6.66726 6.67351 7.21551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.045 4.045 5 C -0.174 4.174 6 C -0.177 4.177 7 C 0.023 3.977 8 C 0.030 3.970 9 C -0.116 4.116 10 C -0.065 4.065 11 C -0.165 4.165 12 C 0.557 3.443 13 O -0.518 6.518 14 N -0.730 5.730 15 C 0.121 3.879 16 C -0.120 4.120 17 C -0.107 4.107 18 H 0.097 0.903 19 C -0.167 4.167 20 C 0.073 3.927 21 H 0.082 0.918 22 O -0.561 6.561 23 C -0.125 4.125 24 C 0.178 3.822 25 O -0.474 6.474 26 C -0.141 4.141 27 O -0.161 6.161 28 H 0.384 0.616 29 H 0.134 0.866 30 H -0.253 1.253 31 H -0.245 1.245 32 H 0.155 0.845 33 H 0.156 0.844 34 H 0.139 0.861 35 H 0.136 0.864 36 H 0.399 0.601 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.073 0.927 40 H 0.073 0.927 41 H 0.071 0.929 42 H 0.090 0.910 43 H 0.379 0.621 44 H 0.091 0.909 45 H 0.075 0.925 46 H 0.399 0.601 47 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.288 -2.889 1.061 3.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.138 4.138 3 Si 0.600 3.400 4 C -0.096 4.096 5 C -0.193 4.193 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.029 3.971 9 C -0.134 4.134 10 C -0.083 4.083 11 C -0.169 4.169 12 C 0.344 3.656 13 O -0.394 6.394 14 N -0.383 5.383 15 C -0.003 4.003 16 C -0.157 4.157 17 C -0.126 4.126 18 H 0.115 0.885 19 C -0.204 4.204 20 C 0.014 3.986 21 H 0.100 0.900 22 O -0.367 6.367 23 C -0.162 4.162 24 C 0.132 3.868 25 O -0.285 6.285 26 C -0.159 4.159 27 O -0.058 6.058 28 H 0.232 0.768 29 H 0.151 0.849 30 H -0.177 1.177 31 H -0.169 1.169 32 H 0.173 0.827 33 H 0.174 0.826 34 H 0.156 0.844 35 H 0.154 0.846 36 H 0.234 0.766 37 H 0.088 0.912 38 H 0.089 0.911 39 H 0.091 0.909 40 H 0.092 0.908 41 H 0.089 0.911 42 H 0.109 0.891 43 H 0.227 0.773 44 H 0.110 0.890 45 H 0.093 0.907 46 H 0.257 0.743 47 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 0.781 -1.863 0.129 2.024 hybrid contribution 0.248 -0.945 -0.006 0.977 sum 1.028 -2.808 0.123 2.993 Atomic orbital electron populations 1.86564 1.16083 1.81745 1.49174 1.24423 0.85265 1.11283 0.92874 0.94206 0.81618 0.76905 0.87285 1.23001 1.00541 0.93868 0.92153 1.21583 1.04053 0.95666 0.97988 1.21911 1.02030 0.98396 0.97305 1.20326 1.03787 0.87524 0.91021 1.17751 0.95530 0.93771 0.90012 1.20703 1.00209 0.98738 0.93767 1.20817 0.95551 0.95505 0.96454 1.20499 1.04590 0.94331 0.97439 1.17969 0.79874 0.84485 0.83229 1.90849 1.49880 1.23452 1.75225 1.45931 1.57980 1.12242 1.22153 1.21386 0.96770 0.97879 0.84217 1.21756 1.01212 0.96792 0.95979 1.22239 0.99255 0.98092 0.92976 0.88465 1.23793 1.00013 1.00198 0.96439 1.23347 0.93703 0.93496 0.88021 0.90026 1.86529 1.74758 1.44196 1.31201 1.23125 1.02572 0.97138 0.93374 1.18285 0.93919 0.84104 0.90529 1.84776 1.36339 1.27548 1.79866 1.21596 1.00298 0.97112 0.96901 1.83937 1.57558 1.37879 1.26460 0.76772 0.84901 1.17693 1.16948 0.82700 0.82618 0.84352 0.84610 0.76583 0.91217 0.91133 0.90857 0.90795 0.91068 0.89105 0.77337 0.89032 0.90667 0.74262 0.83785 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.28 12.88 -35.23 -0.45 -0.17 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.66 32.11 -169.99 -5.46 -6.12 16 4 C -0.05 -0.02 6.21 -35.51 -0.22 -0.24 16 5 C -0.17 -0.08 10.78 -39.82 -0.43 -0.51 16 6 C -0.18 0.00 10.26 -39.38 -0.40 -0.40 16 7 C 0.02 0.02 7.02 -36.54 -0.26 -0.24 16 8 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 9 C -0.12 0.18 9.48 -39.60 -0.38 -0.20 16 10 C -0.06 0.11 9.47 -39.62 -0.38 -0.27 16 11 C -0.16 -0.17 5.89 -104.79 -0.62 -0.79 16 12 C 0.56 1.37 7.75 -12.58 -0.10 1.27 16 13 O -0.52 -3.20 15.14 -16.69 -0.25 -3.45 16 14 N -0.73 0.48 5.50 -61.43 -0.34 0.14 16 15 C 0.12 -0.09 5.66 -4.04 -0.02 -0.12 16 16 C -0.12 0.32 5.17 -26.73 -0.14 0.18 16 17 C -0.11 0.22 3.65 -89.81 -0.33 -0.10 16 18 H 0.10 -0.24 8.13 -51.93 -0.42 -0.66 16 19 C -0.17 0.23 7.46 -25.92 -0.19 0.04 16 20 C 0.07 -0.06 5.21 -25.92 -0.14 -0.19 16 21 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 22 O -0.56 -0.36 13.67 -35.23 -0.48 -0.85 16 23 C -0.12 0.15 7.47 -25.92 -0.19 -0.05 16 24 C 0.18 0.32 6.71 -38.75 -0.26 0.06 16 25 O -0.47 -1.20 11.56 -40.69 -0.47 -1.67 16 26 C -0.14 -0.12 9.65 -39.06 -0.38 -0.49 16 27 O -0.16 -0.20 8.79 4.72 0.04 -0.16 16 28 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 29 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 30 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 31 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 32 H 0.16 -0.11 8.06 -52.48 -0.42 -0.53 16 33 H 0.16 -0.37 7.24 -52.49 -0.38 -0.75 16 34 H 0.14 -0.53 6.95 -52.49 -0.36 -0.89 16 35 H 0.14 -0.65 6.37 -52.49 -0.33 -0.98 16 36 H 0.40 -1.39 6.48 -40.82 -0.26 -1.65 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.07 -0.20 7.84 -51.93 -0.41 -0.60 16 40 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 43 H 0.38 -1.23 9.12 45.56 0.42 -0.82 16 44 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 45 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 46 H 0.40 -0.48 9.06 45.56 0.41 -0.07 16 47 H 0.14 0.01 7.90 -52.49 -0.41 -0.40 16 LS Contribution 399.23 15.07 6.02 6.02 Total: 0.00 -10.96 399.23 -11.09 -22.05 By element: Atomic # 1 Polarization: -8.49 SS G_CDS: -4.76 Total: -13.26 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -4.93 Total: -2.54 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.34 Total: 0.14 kcal Atomic # 8 Polarization: -4.67 SS G_CDS: -1.62 Total: -6.29 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.46 Total: -6.12 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -10.96 -11.09 -22.05 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.555 kcal (2) G-P(sol) polarization free energy of solvation -10.956 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.604 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds