Wall clock time and date at job start Tue Mar 9 2021 13:15:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86310 * 109.47036 * 2 1 4 4 C 1.50703 * 109.47384 * 119.99877 * 2 1 3 5 5 C 1.34832 * 125.65064 * 65.25797 * 4 2 1 6 6 C 1.40795 * 107.04954 * 180.13509 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.62775 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39922 * 119.95362 * 359.97438 * 8 7 6 10 10 C 1.36426 * 120.27884 * 179.97438 * 9 8 7 11 11 C 1.39880 * 120.18268 * 0.02799 * 10 9 8 12 12 C 1.47296 * 120.04118 * 179.97438 * 11 10 9 13 13 O 1.21620 * 119.99738 * 179.97438 * 12 11 10 14 14 N 1.34771 * 120.00379 * 0.02562 * 12 11 10 15 15 C 1.46499 * 120.00153 * 179.97438 * 14 12 11 16 16 C 1.53002 * 109.46862 * 180.02562 * 15 14 12 17 17 C 1.53006 * 109.46708 * 180.02562 * 16 15 14 18 18 H 1.08999 * 112.84711 * 316.19341 * 17 16 15 19 19 C 1.53774 * 113.61774 * 87.50411 * 17 16 15 20 20 C 1.53781 * 87.08480 * 139.97765 * 19 17 16 21 21 H 1.09002 * 113.61287 * 89.11159 * 20 19 17 22 22 O 1.42899 * 113.69193 * 220.00805 * 20 19 17 23 23 C 1.53782 * 113.61122 * 185.00241 * 17 16 15 24 24 C 1.40397 * 119.91102 * 359.97438 * 11 10 9 25 25 O 1.35679 * 120.14052 * 179.97438 * 24 11 10 26 26 C 1.38284 * 119.72192 * 359.70211 * 24 11 10 27 27 O 1.34226 * 125.65134 * 244.97269 * 4 2 1 28 28 H 0.96697 * 113.99670 * 299.99439 * 1 2 3 29 29 H 1.09005 * 109.47504 * 240.00193 * 2 1 3 30 30 H 1.48490 * 109.99973 * 178.68216 * 3 2 1 31 31 H 1.48505 * 109.99738 * 300.00379 * 3 2 1 32 32 H 1.08005 * 126.47500 * 0.02562 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.89704 * 6 5 4 34 34 H 1.07995 * 119.86085 * 0.02562 * 9 8 7 35 35 H 1.07995 * 119.90848 * 180.02562 * 10 9 8 36 36 H 0.97010 * 119.99935 * 0.02562 * 14 12 11 37 37 H 1.08994 * 109.47473 * 299.99765 * 15 14 12 38 38 H 1.08996 * 109.47262 * 60.00294 * 15 14 12 39 39 H 1.09006 * 109.47139 * 299.99820 * 16 15 14 40 40 H 1.08995 * 109.47625 * 60.00507 * 16 15 14 41 41 H 1.09001 * 113.61348 * 254.52685 * 19 17 16 42 42 H 1.09004 * 113.61678 * 25.43043 * 19 17 16 43 43 H 0.96703 * 113.99733 * 277.53017 * 22 20 19 44 44 H 1.09004 * 113.61687 * 334.55770 * 23 17 16 45 45 H 1.08997 * 113.61738 * 105.47096 * 23 17 16 46 46 H 0.96700 * 113.99674 * 90.00120 * 25 24 11 47 47 H 1.08001 * 120.09216 * 180.31452 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7611 -2.0190 1.5070 6 6 2.3804 -2.2628 2.7477 7 6 2.9082 -1.0784 3.1617 8 6 3.6583 -0.8543 4.4126 9 6 3.8792 -1.9177 5.2948 10 6 4.5722 -1.7181 6.4528 11 6 5.0666 -0.4477 6.7665 12 6 5.8140 -0.2357 8.0179 13 8 6.2438 0.8691 8.2897 14 7 6.0224 -1.2660 8.8613 15 6 6.7662 -1.0551 10.1057 16 6 6.8603 -2.3752 10.8735 17 6 7.6366 -2.1548 12.1734 18 1 8.5280 -1.5428 12.0355 19 6 6.7539 -1.7047 13.3494 20 6 7.5960 -2.6372 14.2361 21 1 8.4760 -2.1563 14.6633 22 8 6.8295 -3.3541 15.2059 23 6 7.8939 -3.4484 12.9641 24 6 4.8494 0.6248 5.8870 25 8 5.3264 1.8591 6.1869 26 6 4.1522 0.4168 4.7110 27 8 2.6272 -0.1464 2.2302 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5345 1.7704 0.0321 31 1 1.5614 2.4680 -1.2085 32 1 1.2453 -2.7430 0.8936 33 1 2.4312 -3.2078 3.2681 34 1 3.5002 -2.9007 5.0576 35 1 4.7396 -2.5432 7.1292 36 1 5.6804 -2.1475 8.6441 37 1 7.7694 -0.6981 9.8733 38 1 6.2496 -0.3150 10.7168 39 1 5.8571 -2.7327 11.1060 40 1 7.3771 -3.1150 10.2623 41 1 6.8632 -0.6491 13.5984 42 1 5.7125 -2.0132 13.2568 43 1 6.6390 -2.8490 16.0082 44 1 7.1642 -4.2336 12.7662 45 1 8.9236 -3.8006 12.9021 46 1 6.2193 2.0268 5.8557 47 1 3.9861 1.2365 4.0277 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:51 Heat of formation + Delta-G solvation = -90.895055 kcal Electronic energy + Delta-G solvation = -30462.823715 eV Core-core repulsion = 25965.964781 eV Total energy + Delta-G solvation = -4496.858934 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.74808 -41.57064 -40.42892 -39.65991 -38.10769 -37.83671 -36.75997 -35.61061 -34.27066 -33.58277 -31.67592 -31.20474 -30.30112 -27.22164 -26.68374 -25.67530 -24.22469 -24.03210 -22.66625 -22.36132 -21.94437 -21.32804 -20.42723 -19.76193 -18.84994 -18.53780 -18.30946 -17.68023 -17.50826 -17.29233 -16.76497 -16.51303 -16.39469 -16.21215 -15.97119 -15.74318 -15.47883 -15.32540 -15.16213 -14.70413 -14.40650 -14.27767 -14.13959 -13.99011 -13.87934 -13.62070 -13.49526 -13.38408 -13.28309 -12.83317 -12.72242 -12.66859 -12.44897 -12.26471 -11.95724 -11.90112 -11.64902 -11.16238 -11.13784 -10.95582 -10.73966 -10.64886 -10.59123 -10.15696 -9.95599 -9.01987 -5.05051 -0.79833 0.14394 0.63849 1.12901 1.39317 1.45289 1.73629 1.86183 1.92005 2.06219 2.64021 3.01639 3.28458 3.32006 3.41407 3.52494 3.61074 3.64426 3.67790 3.81292 3.87110 3.98201 4.00133 4.01404 4.12124 4.21586 4.28595 4.30888 4.38958 4.41632 4.61861 4.64074 4.69920 4.70343 4.78896 4.82839 4.85938 4.88734 4.96817 5.02534 5.06468 5.09821 5.14928 5.21576 5.28127 5.37538 5.41973 5.50940 5.53244 5.96135 6.46383 6.58861 6.69435 6.87530 7.15461 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.024 4.024 3 Si 0.767 3.233 4 C -0.053 4.053 5 C -0.184 4.184 6 C -0.173 4.173 7 C 0.006 3.994 8 C 0.025 3.975 9 C -0.110 4.110 10 C -0.052 4.052 11 C -0.180 4.180 12 C 0.553 3.447 13 O -0.566 6.566 14 N -0.714 5.714 15 C 0.123 3.877 16 C -0.109 4.109 17 C -0.101 4.101 18 H 0.101 0.899 19 C -0.166 4.166 20 C 0.066 3.934 21 H 0.091 0.909 22 O -0.584 6.584 23 C -0.127 4.127 24 C 0.160 3.840 25 O -0.495 6.495 26 C -0.152 4.152 27 O -0.174 6.174 28 H 0.399 0.601 29 H 0.139 0.861 30 H -0.295 1.295 31 H -0.277 1.277 32 H 0.165 0.835 33 H 0.182 0.818 34 H 0.169 0.831 35 H 0.172 0.828 36 H 0.415 0.585 37 H 0.061 0.939 38 H 0.055 0.945 39 H 0.078 0.922 40 H 0.087 0.913 41 H 0.071 0.929 42 H 0.083 0.917 43 H 0.393 0.607 44 H 0.085 0.915 45 H 0.079 0.921 46 H 0.408 0.592 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.263 -5.160 1.217 5.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.135 4.135 3 Si 0.672 3.328 4 C -0.103 4.103 5 C -0.203 4.203 6 C -0.191 4.191 7 C -0.044 4.044 8 C 0.024 3.976 9 C -0.128 4.128 10 C -0.070 4.070 11 C -0.184 4.184 12 C 0.341 3.659 13 O -0.446 6.446 14 N -0.367 5.367 15 C -0.001 4.001 16 C -0.146 4.146 17 C -0.120 4.120 18 H 0.120 0.880 19 C -0.204 4.204 20 C 0.007 3.993 21 H 0.109 0.891 22 O -0.392 6.392 23 C -0.164 4.164 24 C 0.114 3.886 25 O -0.308 6.308 26 C -0.170 4.170 27 O -0.072 6.072 28 H 0.250 0.750 29 H 0.156 0.844 30 H -0.222 1.222 31 H -0.203 1.203 32 H 0.183 0.817 33 H 0.199 0.801 34 H 0.187 0.813 35 H 0.189 0.811 36 H 0.253 0.747 37 H 0.080 0.920 38 H 0.073 0.927 39 H 0.097 0.903 40 H 0.106 0.894 41 H 0.090 0.910 42 H 0.102 0.898 43 H 0.242 0.758 44 H 0.103 0.897 45 H 0.098 0.902 46 H 0.268 0.732 47 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 0.203 -4.171 0.315 4.188 hybrid contribution 0.424 -0.243 -0.070 0.494 sum 0.627 -4.414 0.245 4.465 Atomic orbital electron populations 1.86531 1.15917 1.82088 1.50331 1.24418 0.85396 1.10909 0.92748 0.93337 0.78189 0.75891 0.85403 1.23233 1.00541 0.94293 0.92266 1.21836 1.04232 0.95766 0.98467 1.22242 1.00912 0.98972 0.97016 1.20575 1.04570 0.87936 0.91300 1.17947 0.95353 0.93990 0.90268 1.21053 0.99308 0.99414 0.92993 1.21167 0.93950 0.95119 0.96757 1.20541 1.05488 0.95423 0.96905 1.18266 0.79486 0.84307 0.83836 1.90819 1.52023 1.25367 1.76366 1.45826 1.57038 1.12377 1.21504 1.21359 0.96013 0.98643 0.84066 1.21678 1.01639 0.95808 0.95514 1.22217 0.99280 0.97597 0.92918 0.88036 1.23760 0.99683 1.00115 0.96828 1.23511 0.94024 0.93683 0.88044 0.89078 1.86482 1.75077 1.45362 1.32243 1.23134 1.02658 0.97192 0.93417 1.18497 0.94712 0.84143 0.91298 1.84730 1.37274 1.28484 1.80308 1.21589 1.00909 0.97733 0.96801 1.83923 1.57887 1.38501 1.26855 0.75009 0.84412 1.22175 1.20330 0.81693 0.80088 0.81330 0.81090 0.74703 0.92050 0.92695 0.90335 0.89407 0.91027 0.89795 0.75756 0.89666 0.90198 0.73193 0.84142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.86 12.88 -148.98 -1.92 -1.06 16 2 C -0.02 0.03 2.98 71.24 0.21 0.25 16 3 Si 0.77 -0.65 32.11 68.60 2.20 1.55 16 4 C -0.05 -0.05 6.21 24.90 0.15 0.11 16 5 C -0.18 0.02 10.78 22.11 0.24 0.26 16 6 C -0.17 0.27 10.26 22.40 0.23 0.50 16 7 C 0.01 0.01 7.02 24.24 0.17 0.18 16 8 C 0.03 0.01 5.87 -20.08 -0.12 -0.11 16 9 C -0.11 0.56 9.48 22.25 0.21 0.77 16 10 C -0.05 0.27 9.47 22.24 0.21 0.48 16 11 C -0.18 -0.42 5.89 -19.97 -0.12 -0.53 16 12 C 0.55 3.10 7.75 86.63 0.67 3.77 16 13 O -0.57 -8.15 15.14 16.90 0.26 -7.89 16 14 N -0.71 1.30 5.50 -466.51 -2.57 -1.27 16 15 C 0.12 -0.18 5.66 86.38 0.49 0.31 16 16 C -0.11 0.68 5.17 30.60 0.16 0.84 16 17 C -0.10 0.47 3.65 -10.27 -0.04 0.43 16 18 H 0.10 -0.54 8.13 -2.39 -0.02 -0.56 16 19 C -0.17 0.46 7.46 31.12 0.23 0.69 16 20 C 0.07 -0.11 5.21 31.12 0.16 0.05 16 21 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 22 O -0.58 -0.80 13.67 -148.98 -2.04 -2.83 16 23 C -0.13 0.36 7.47 31.12 0.23 0.59 16 24 C 0.16 0.81 6.71 22.81 0.15 0.97 16 25 O -0.49 -3.78 11.56 -68.97 -0.80 -4.58 16 26 C -0.15 -0.44 9.65 22.61 0.22 -0.22 16 27 O -0.17 -0.50 8.79 -6.02 -0.05 -0.55 16 28 H 0.40 -3.58 8.70 -74.06 -0.64 -4.22 16 29 H 0.14 -0.35 7.96 -2.38 -0.02 -0.37 16 30 H -0.29 -1.79 7.11 99.48 0.71 -1.09 16 31 H -0.28 -1.19 7.11 99.48 0.71 -0.48 16 32 H 0.17 -0.45 8.06 -2.91 -0.02 -0.47 16 33 H 0.18 -1.40 7.24 -2.91 -0.02 -1.42 16 34 H 0.17 -1.91 6.95 -2.91 -0.02 -1.93 16 35 H 0.17 -2.22 6.37 -2.91 -0.02 -2.24 16 36 H 0.41 -3.67 6.48 -92.70 -0.60 -4.28 16 37 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 38 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 39 H 0.08 -0.53 7.84 -2.38 -0.02 -0.55 16 40 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 41 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 42 H 0.08 -0.11 7.90 -2.38 -0.02 -0.13 16 43 H 0.39 -2.47 9.12 -74.05 -0.68 -3.15 16 44 H 0.08 -0.12 8.10 -2.38 -0.02 -0.14 16 45 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 46 H 0.41 0.24 9.06 -74.06 -0.67 -0.43 16 47 H 0.14 0.34 7.90 -2.91 -0.02 0.32 16 Total: 0.00 -27.09 399.23 -2.94 -30.03 By element: Atomic # 1 Polarization: -21.22 SS G_CDS: -1.50 Total: -22.72 kcal Atomic # 6 Polarization: 5.84 SS G_CDS: 3.47 Total: 9.31 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -2.57 Total: -1.27 kcal Atomic # 8 Polarization: -12.36 SS G_CDS: -4.55 Total: -16.91 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: 2.20 Total: 1.55 kcal Total: -27.09 -2.94 -30.03 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.867 kcal (2) G-P(sol) polarization free energy of solvation -27.089 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.028 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.895 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds