Wall clock time and date at job start Tue Mar 9 2021 13:15:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.39284 * 121.03550 * 2 1 4 4 C 1.46500 * 134.19934 * 0.02562 * 3 2 1 5 5 C 1.50703 * 126.60037 * 359.97438 * 4 3 2 6 6 O 1.42896 * 109.46756 * 75.00392 * 5 4 3 7 7 Si 1.86299 * 109.47171 * 195.00416 * 5 4 3 8 8 C 1.34182 * 106.80369 * 180.02562 * 4 3 2 9 9 N 1.36947 * 109.94701 * 359.97438 * 8 4 3 10 10 C 1.37155 * 110.11722 * 0.02562 * 9 8 4 11 11 N 1.32822 * 132.96424 * 180.02562 * 10 9 8 12 12 C 1.31312 * 121.89123 * 179.72892 * 11 10 9 13 13 C 1.39747 * 121.02816 * 180.02562 * 2 1 3 14 14 C 1.47667 * 120.45531 * 359.97438 * 13 2 1 15 15 O 1.21576 * 119.99589 * 354.23481 * 14 13 2 16 16 N 1.34770 * 120.00110 * 174.24203 * 14 13 2 17 17 C 1.46502 * 120.00151 * 179.97438 * 16 14 13 18 18 C 1.52994 * 109.47470 * 179.97438 * 17 16 14 19 19 C 1.52994 * 109.47567 * 180.02562 * 18 17 16 20 20 H 1.09003 * 112.84633 * 316.19033 * 19 18 17 21 21 C 1.54047 * 113.62395 * 87.50122 * 19 18 17 22 22 C 1.53778 * 86.99058 * 139.97873 * 21 19 18 23 23 H 1.09008 * 113.60889 * 89.16209 * 22 21 19 24 24 O 1.42891 * 113.62073 * 219.98302 * 22 21 19 25 25 C 1.53781 * 87.17360 * 334.57608 * 22 21 19 26 26 H 1.08997 * 109.47089 * 263.76161 * 1 2 3 27 27 H 1.09003 * 109.46665 * 23.75837 * 1 2 3 28 28 H 1.08991 * 109.47021 * 143.75591 * 1 2 3 29 29 H 1.09000 * 109.47196 * 315.00302 * 5 4 3 30 30 H 0.96700 * 114.00058 * 179.97438 * 6 5 4 31 31 H 1.48497 * 109.99734 * 178.68429 * 7 5 4 32 32 H 1.48498 * 110.00037 * 300.00144 * 7 5 4 33 33 H 1.07994 * 125.02406 * 180.02562 * 8 4 3 34 34 H 0.97005 * 124.94078 * 180.02562 * 9 8 4 35 35 H 1.07992 * 119.31157 * 180.27317 * 12 11 10 36 36 H 0.97006 * 120.00406 * 359.97438 * 16 14 13 37 37 H 1.08998 * 109.47297 * 59.99613 * 17 16 14 38 38 H 1.09001 * 109.46885 * 299.99805 * 17 16 14 39 39 H 1.09007 * 109.47367 * 59.99684 * 18 17 16 40 40 H 1.09009 * 109.46875 * 300.00198 * 18 17 16 41 41 H 1.09005 * 113.60832 * 25.47798 * 21 19 18 42 42 H 1.09000 * 113.69613 * 254.49957 * 21 19 18 43 43 H 0.96707 * 114.00285 * 279.14234 * 24 22 21 44 44 H 1.08996 * 113.61997 * 140.02014 * 25 22 21 45 45 H 1.09003 * 113.60998 * 270.84243 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2252 1.1935 0.0000 4 6 1.8518 2.6101 0.0005 5 6 0.4529 3.1706 0.0006 6 8 -0.1189 3.0237 1.3019 7 14 0.5075 4.9766 -0.4535 8 6 2.9950 3.3125 -0.0004 9 7 4.0670 2.4603 -0.0008 10 6 3.6348 1.1586 -0.0008 11 7 4.2721 -0.0067 -0.0006 12 6 3.6267 -1.1503 0.0046 13 6 2.2274 -1.1975 -0.0005 14 6 1.5224 -2.4950 -0.0005 15 8 0.3118 -2.5290 0.1057 16 7 2.2210 -3.6415 -0.1182 17 6 1.5216 -4.9288 -0.1176 18 6 2.5390 -6.0621 -0.2637 19 6 1.8087 -7.4064 -0.2638 20 1 1.0348 -7.4677 0.5014 21 6 1.3347 -7.8514 -1.6604 22 6 1.7636 -9.2739 -1.2637 23 1 0.9765 -9.8463 -0.7728 24 8 2.3982 -9.9963 -2.3207 25 6 2.7525 -8.6204 -0.2838 26 1 -0.3633 -0.1117 1.0215 27 1 -0.3633 0.9406 -0.4140 28 1 -0.3633 -0.8287 -0.6075 29 1 -0.1547 2.6314 -0.7262 30 1 -1.0210 3.3642 1.3759 31 1 -0.8687 5.5334 -0.4879 32 1 1.3328 5.7228 0.5299 33 1 3.0601 4.3905 0.0001 34 1 4.9968 2.7371 -0.0010 35 1 4.1869 -2.0735 0.0090 36 1 3.1869 -3.6144 -0.2032 37 1 0.8198 -4.9614 -0.9509 38 1 0.9782 -5.0466 0.8199 39 1 3.2412 -6.0297 0.5694 40 1 3.0822 -5.9440 -1.2014 41 1 1.9225 -7.4296 -2.4757 42 1 0.2606 -7.7457 -1.8127 43 1 1.7819 -10.3899 -2.9534 44 1 2.8222 -9.1352 0.6744 45 1 3.7276 -8.4098 -0.7231 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:54 Heat of formation + Delta-G solvation = -17.342047 kcal Electronic energy + Delta-G solvation = -27817.521507 eV Core-core repulsion = 23803.053154 eV Total energy + Delta-G solvation = -4014.468352 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.157 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.78610 -40.89762 -40.33172 -38.66124 -37.83743 -36.83162 -35.70432 -34.84307 -32.30933 -31.91783 -30.46555 -28.77622 -26.79496 -26.56908 -25.71202 -24.39954 -23.72976 -22.59388 -21.70867 -20.55867 -20.31333 -19.17488 -18.72254 -18.50102 -18.32451 -17.61459 -17.05206 -16.72940 -16.58505 -16.26557 -16.03367 -15.59373 -15.42225 -15.24719 -15.15265 -14.92539 -14.66848 -14.24573 -14.05783 -13.78253 -13.65553 -13.47523 -13.44565 -13.32353 -13.18856 -12.90974 -12.70804 -12.64553 -12.43952 -12.03558 -11.99134 -11.72871 -11.24534 -11.08212 -10.99094 -10.73604 -10.34784 -10.19539 -10.05025 -9.53103 -9.08024 -5.01714 -0.18051 -0.00121 1.22367 1.39478 1.52100 1.66364 1.89785 1.98261 2.15091 2.89311 3.20622 3.29316 3.37618 3.44254 3.54045 3.60255 3.69820 3.74023 3.77774 3.83071 3.91278 4.04271 4.11672 4.14834 4.23037 4.31602 4.34756 4.41704 4.51947 4.65015 4.69534 4.76397 4.77848 4.82599 4.89607 4.96488 4.98076 5.06256 5.09648 5.18583 5.24854 5.37415 5.40294 5.43839 5.58937 5.81688 6.15017 6.48413 6.51121 6.69398 6.90093 7.28776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.084 3.916 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.681 3.319 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.180 3.820 13 C -0.234 4.234 14 C 0.571 3.429 15 O -0.531 6.531 16 N -0.730 5.730 17 C 0.121 3.879 18 C -0.120 4.120 19 C -0.106 4.106 20 H 0.097 0.903 21 C -0.167 4.167 22 C 0.073 3.927 23 H 0.081 0.919 24 O -0.562 6.562 25 C -0.125 4.125 26 H 0.085 0.915 27 H 0.066 0.934 28 H 0.097 0.903 29 H 0.078 0.922 30 H 0.378 0.622 31 H -0.258 1.258 32 H -0.253 1.253 33 H 0.184 0.816 34 H 0.426 0.574 35 H 0.162 0.838 36 H 0.399 0.601 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.074 0.926 40 H 0.073 0.927 41 H 0.090 0.910 42 H 0.070 0.930 43 H 0.379 0.621 44 H 0.074 0.926 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.763 1.241 -2.799 3.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.076 3.924 3 C -0.155 4.155 4 C -0.141 4.141 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.055 4.055 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.011 3.989 13 C -0.241 4.241 14 C 0.359 3.641 15 O -0.409 6.409 16 N -0.382 5.382 17 C -0.002 4.002 18 C -0.158 4.158 19 C -0.125 4.125 20 H 0.115 0.885 21 C -0.204 4.204 22 C 0.014 3.986 23 H 0.099 0.901 24 O -0.367 6.367 25 C -0.162 4.162 26 H 0.104 0.896 27 H 0.085 0.915 28 H 0.116 0.884 29 H 0.096 0.904 30 H 0.226 0.774 31 H -0.182 1.182 32 H -0.177 1.177 33 H 0.201 0.799 34 H 0.265 0.735 35 H 0.179 0.821 36 H 0.234 0.766 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.109 0.891 42 H 0.089 0.911 43 H 0.226 0.774 44 H 0.093 0.907 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.843 2.116 -2.035 3.466 hybrid contribution -1.204 -0.349 0.544 1.367 sum 0.639 1.767 -1.491 2.398 Atomic orbital electron populations 1.21161 0.88954 1.03505 1.04209 1.19884 0.97067 0.89187 0.86263 1.19460 0.92873 0.93503 1.09671 1.19424 0.93127 0.90576 1.10946 1.24163 0.92103 1.11171 0.87961 1.86646 1.33655 1.83864 1.29831 0.95252 0.83401 0.74080 0.89149 1.21717 0.85005 0.95927 1.02819 1.41484 1.09572 1.02672 1.63749 1.18470 0.89267 0.85900 0.98854 1.66436 1.40541 0.95992 1.18654 1.22501 0.90073 0.94439 0.91868 1.20421 0.94779 0.93720 1.15229 1.17861 0.86812 0.83263 0.76148 1.90753 1.13557 1.87084 1.49476 1.45904 1.10796 1.05915 1.75598 1.21376 0.95095 0.81034 1.02674 1.21758 0.97955 0.92988 1.03114 1.22282 0.98736 0.93368 0.98117 0.88476 1.23840 1.01798 0.97333 0.97473 1.23354 0.95697 0.90462 0.89070 0.90074 1.86528 1.37719 1.72388 1.40076 1.23115 0.98747 0.95474 0.98866 0.89635 0.91489 0.88426 0.90440 0.77402 1.18246 1.17711 0.79924 0.73520 0.82078 0.76585 0.91170 0.91204 0.90745 0.90826 0.89103 0.91089 0.77367 0.90688 0.89017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.36 8.69 36.01 0.31 -0.05 16 2 C 0.08 0.30 5.98 -103.67 -0.62 -0.31 16 3 C -0.15 -0.50 6.16 -105.13 -0.65 -1.14 16 4 C -0.13 -0.19 5.61 -102.72 -0.58 -0.76 16 5 C -0.04 0.01 2.05 36.01 0.07 0.08 16 6 O -0.53 -0.60 12.86 -35.23 -0.45 -1.06 16 7 Si 0.68 -1.31 30.80 -169.99 -5.24 -6.54 16 8 C 0.07 -0.04 10.44 -16.70 -0.17 -0.22 16 9 N -0.57 0.01 6.04 -12.12 -0.07 -0.06 16 10 C 0.31 0.91 8.42 -155.71 -1.31 -0.40 16 11 N -0.50 -1.55 10.37 -11.96 -0.12 -1.67 16 12 C 0.18 0.26 10.67 -17.11 -0.18 0.07 16 13 C -0.23 -0.63 5.89 -104.82 -0.62 -1.25 16 14 C 0.57 1.63 7.72 -12.41 -0.10 1.53 16 15 O -0.53 -3.06 13.49 5.30 0.07 -2.98 16 16 N -0.73 0.20 5.51 -61.31 -0.34 -0.14 16 17 C 0.12 -0.08 5.66 -4.04 -0.02 -0.10 16 18 C -0.12 0.29 5.17 -26.74 -0.14 0.15 16 19 C -0.11 0.20 3.66 -89.67 -0.33 -0.13 16 20 H 0.10 -0.21 8.13 -51.93 -0.42 -0.64 16 21 C -0.17 0.22 7.48 -25.78 -0.19 0.03 16 22 C 0.07 -0.05 5.20 -25.92 -0.13 -0.18 16 23 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 24 O -0.56 -0.46 13.67 -35.23 -0.48 -0.94 16 25 C -0.12 0.11 7.47 -25.92 -0.19 -0.08 16 26 H 0.09 0.32 8.14 -51.93 -0.42 -0.10 16 27 H 0.07 0.10 5.06 -51.93 -0.26 -0.17 16 28 H 0.10 0.38 5.94 -51.93 -0.31 0.07 16 29 H 0.08 -0.09 6.05 -51.93 -0.31 -0.41 16 30 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 31 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 32 H -0.25 -0.10 7.04 56.52 0.40 0.30 16 33 H 0.18 -0.68 6.31 -52.49 -0.33 -1.01 16 34 H 0.43 -1.18 8.96 -40.82 -0.37 -1.55 16 35 H 0.16 -0.36 6.43 -52.49 -0.34 -0.70 16 36 H 0.40 -1.14 6.55 -40.82 -0.27 -1.40 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.07 -0.18 7.85 -51.92 -0.41 -0.59 16 41 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 42 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.38 -1.17 9.12 45.56 0.42 -0.76 16 44 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 45 H 0.09 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 365.29 15.07 5.50 5.50 Total: 0.00 -10.77 365.29 -11.17 -21.94 By element: Atomic # 1 Polarization: -6.08 SS G_CDS: -5.19 Total: -11.28 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -4.85 Total: -2.76 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.53 Total: -1.87 kcal Atomic # 8 Polarization: -4.12 SS G_CDS: -0.86 Total: -4.99 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.24 Total: -6.54 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -10.77 -11.17 -21.94 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.598 kcal (2) G-P(sol) polarization free energy of solvation -10.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.170 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.940 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds