Wall clock time and date at job start Tue Mar 9 2021 13:16:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.38969 * 119.95347 * 2 1 4 4 O 1.35713 * 119.91645 * 0.02562 * 3 2 1 5 5 C 1.39021 * 120.17265 * 179.74534 * 3 2 1 6 6 C 1.50707 * 119.95597 * 180.27714 * 5 3 2 7 7 O 1.42904 * 109.46876 * 75.27522 * 6 5 3 8 8 Si 1.86303 * 109.47046 * 195.27575 * 6 5 3 9 9 C 1.37679 * 120.09068 * 0.55629 * 5 3 2 10 10 C 1.39753 * 119.90823 * 359.43964 * 9 5 3 11 11 C 1.47608 * 120.08691 * 180.30138 * 10 9 5 12 12 O 1.21577 * 120.00134 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99796 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99807 * 180.02562 * 13 11 10 15 15 C 1.53003 * 109.47221 * 179.97438 * 14 13 11 16 16 C 1.52998 * 109.47225 * 179.97438 * 15 14 13 17 17 H 1.09001 * 112.84936 * 43.80268 * 16 15 14 18 18 C 1.53777 * 113.61505 * 175.00009 * 16 15 14 19 19 C 1.53773 * 87.08195 * 139.98030 * 18 16 15 20 20 H 1.09003 * 113.61828 * 89.19784 * 19 18 16 21 21 O 1.42907 * 113.61710 * 220.01904 * 19 18 16 22 22 C 1.53773 * 87.08392 * 334.56890 * 19 18 16 23 23 C 1.37723 * 119.95544 * 180.02562 * 2 1 3 24 24 H 1.09002 * 109.46734 * 269.97701 * 1 2 3 25 25 H 1.08999 * 109.46641 * 29.97896 * 1 2 3 26 26 H 1.08998 * 109.46889 * 149.97880 * 1 2 3 27 27 H 0.96692 * 114.00531 * 89.99677 * 4 3 2 28 28 H 1.08998 * 109.46889 * 315.27378 * 6 5 3 29 29 H 0.96703 * 113.99812 * 180.02562 * 7 6 5 30 30 H 1.48496 * 109.99906 * 299.99855 * 8 6 5 31 31 H 1.48494 * 109.99996 * 61.32096 * 8 6 5 32 32 H 1.08002 * 120.04953 * 179.72504 * 9 5 3 33 33 H 0.97004 * 120.00063 * 359.97438 * 13 11 10 34 34 H 1.09005 * 109.47323 * 299.99877 * 14 13 11 35 35 H 1.08997 * 109.47493 * 59.99479 * 14 13 11 36 36 H 1.08991 * 109.46874 * 300.00147 * 15 14 13 37 37 H 1.09000 * 109.46781 * 60.00076 * 15 14 13 38 38 H 1.09002 * 113.61704 * 254.53505 * 18 16 15 39 39 H 1.09008 * 113.61617 * 25.43407 * 18 16 15 40 40 H 0.96704 * 113.99780 * 180.02562 * 21 19 18 41 41 H 1.09003 * 113.61456 * 270.88172 * 22 19 18 42 42 H 1.08999 * 113.61968 * 139.98330 * 22 19 18 43 43 H 1.08003 * 120.04312 * 359.95967 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 0.0053 6 6 4.3386 2.5180 0.0116 7 8 4.2725 3.0980 1.3160 8 14 6.1197 2.2180 -0.4451 9 6 4.2860 0.0208 -0.0009 10 6 3.5919 -1.1921 -0.0008 11 6 4.3329 -2.4687 -0.0008 12 8 5.5487 -2.4659 -0.0004 13 7 3.6617 -3.6375 -0.0012 14 6 4.3971 -4.9045 -0.0006 15 6 3.4056 -6.0698 -0.0006 16 6 4.1737 -7.3930 -0.0006 17 1 5.0132 -7.3951 0.6947 18 6 3.2690 -8.6304 0.1222 19 6 4.1875 -9.3070 -0.9089 20 1 5.0308 -9.8343 -0.4630 21 8 3.4847 -10.0969 -1.8704 22 6 4.5360 -7.8950 -1.4083 23 6 2.1948 -1.1932 -0.0005 24 1 -0.3633 -0.0004 1.0277 25 1 -0.3632 0.8902 -0.5135 26 1 -0.3633 -0.8898 -0.5142 27 1 1.3226 2.7178 0.8840 28 1 3.8876 3.1975 -0.7115 29 1 4.7332 3.9447 1.3937 30 1 6.7460 1.2929 0.5332 31 1 6.2038 1.6444 -1.8122 32 1 5.3660 0.0258 -0.0012 33 1 2.6917 -3.6397 -0.0011 34 1 5.0246 -4.9609 -0.8902 35 1 5.0234 -4.9607 0.8898 36 1 2.7786 -6.0132 0.8891 37 1 2.7792 -6.0137 -0.8908 38 1 3.2991 -9.0974 1.1067 39 1 2.2535 -8.4665 -0.2387 40 1 4.0573 -10.5254 -2.5214 41 1 3.8671 -7.5299 -2.1876 42 1 5.5891 -7.7681 -1.6595 43 1 1.6547 -2.1286 -0.0003 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:16 Heat of formation + Delta-G solvation = -113.633387 kcal Electronic energy + Delta-G solvation = -24942.002769 eV Core-core repulsion = 21147.518440 eV Total energy + Delta-G solvation = -3794.484328 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.69419 -40.65997 -40.16080 -37.77996 -37.57210 -36.84108 -35.67279 -34.15733 -32.56818 -31.02355 -28.12418 -26.96037 -26.80075 -26.08010 -24.15744 -22.73693 -21.98288 -21.39903 -20.54270 -19.54272 -18.72013 -18.45321 -18.32816 -17.81508 -16.81043 -16.69003 -16.61703 -16.23452 -15.86695 -15.46833 -15.37642 -15.32639 -15.07025 -14.79017 -14.45178 -14.16830 -13.91935 -13.69319 -13.54963 -13.49397 -13.37753 -13.02751 -12.96089 -12.77316 -12.63516 -12.50477 -12.09439 -11.92001 -11.78566 -11.52681 -11.30723 -11.02171 -10.74996 -10.34538 -10.20736 -10.01935 -9.68180 -4.97916 -0.40593 0.02810 1.27338 1.60978 1.71342 2.00724 2.03563 2.54665 3.06517 3.16092 3.22960 3.38242 3.49401 3.51712 3.59927 3.66768 3.74789 3.86718 3.91040 3.98330 4.12444 4.17205 4.25056 4.27821 4.37827 4.45871 4.51179 4.57674 4.59090 4.63809 4.71809 4.73128 4.83623 4.89276 4.96562 4.98805 5.05104 5.07258 5.13814 5.23722 5.31211 5.35320 5.49178 6.37699 6.53947 6.55305 6.65918 7.12998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.116 4.116 3 C 0.162 3.838 4 O -0.488 6.488 5 C -0.105 4.105 6 C -0.065 4.065 7 O -0.547 6.547 8 Si 0.679 3.321 9 C -0.054 4.054 10 C -0.138 4.138 11 C 0.560 3.440 12 O -0.534 6.534 13 N -0.726 5.726 14 C 0.119 3.881 15 C -0.120 4.120 16 C -0.107 4.107 17 H 0.097 0.903 18 C -0.124 4.124 19 C 0.074 3.926 20 H 0.082 0.918 21 O -0.561 6.561 22 C -0.167 4.167 23 C -0.066 4.066 24 H 0.074 0.926 25 H 0.078 0.922 26 H 0.071 0.929 27 H 0.400 0.600 28 H 0.081 0.919 29 H 0.385 0.615 30 H -0.245 1.245 31 H -0.253 1.253 32 H 0.139 0.861 33 H 0.400 0.600 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.075 0.925 39 H 0.091 0.909 40 H 0.379 0.621 41 H 0.090 0.910 42 H 0.070 0.930 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.139 1.361 0.758 2.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.117 4.117 3 C 0.116 3.884 4 O -0.300 6.300 5 C -0.106 4.106 6 C -0.175 4.175 7 O -0.354 6.354 8 Si 0.580 3.420 9 C -0.072 4.072 10 C -0.142 4.142 11 C 0.348 3.652 12 O -0.411 6.411 13 N -0.379 5.379 14 C -0.004 4.004 15 C -0.157 4.157 16 C -0.126 4.126 17 H 0.116 0.884 18 C -0.162 4.162 19 C 0.015 3.985 20 H 0.100 0.900 21 O -0.367 6.367 22 C -0.204 4.204 23 C -0.085 4.085 24 H 0.093 0.907 25 H 0.097 0.903 26 H 0.090 0.910 27 H 0.258 0.742 28 H 0.099 0.901 29 H 0.233 0.767 30 H -0.170 1.170 31 H -0.177 1.177 32 H 0.156 0.844 33 H 0.236 0.764 34 H 0.089 0.911 35 H 0.089 0.911 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.110 0.890 40 H 0.227 0.773 41 H 0.109 0.891 42 H 0.089 0.911 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -1.482 0.351 0.384 1.571 hybrid contribution -0.527 -0.306 0.156 0.629 sum -2.009 0.045 0.540 2.081 Atomic orbital electron populations 1.20740 0.89502 1.03871 1.02914 1.20207 0.97408 0.91954 1.02104 1.18256 0.88622 0.85410 0.96114 1.84641 1.75586 1.35640 1.34086 1.19615 0.93193 0.93912 1.03847 1.24534 1.10142 0.93908 0.88935 1.86428 1.79409 1.40933 1.28618 0.95454 0.77985 0.88040 0.80562 1.20982 1.00239 0.90552 0.95445 1.19787 0.93577 0.93288 1.07504 1.18122 0.87197 0.83612 0.76307 1.90810 1.13394 1.87561 1.49373 1.45900 1.10460 1.05719 1.75791 1.21427 0.94770 0.81315 1.02896 1.21754 0.97918 0.92897 1.03159 1.22238 0.99080 0.93189 0.98059 0.88450 1.23119 0.99366 0.95006 0.98680 1.23343 0.95154 0.89556 0.90473 0.89998 1.86530 1.37911 1.67598 1.44641 1.23792 1.02255 0.97204 0.97188 1.21100 0.92417 0.97926 0.97041 0.90734 0.90309 0.90994 0.74197 0.90119 0.76744 1.17000 1.17697 0.84374 0.76404 0.91069 0.91089 0.90737 0.90831 0.90641 0.89028 0.77333 0.89118 0.91094 0.84849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.18 9.79 36.01 0.35 0.53 16 2 C -0.12 -0.08 5.89 -104.54 -0.62 -0.70 16 3 C 0.16 0.31 6.66 -39.02 -0.26 0.05 16 4 O -0.49 -0.26 11.84 -18.84 -0.22 -0.49 16 5 C -0.10 -0.31 5.30 -104.53 -0.55 -0.87 16 6 C -0.06 -0.05 2.37 36.01 0.09 0.04 16 7 O -0.55 0.01 12.86 -35.23 -0.45 -0.44 16 8 Si 0.68 0.34 30.19 -169.99 -5.13 -4.79 16 9 C -0.05 -0.23 8.20 -39.22 -0.32 -0.55 16 10 C -0.14 -0.43 5.88 -104.96 -0.62 -1.05 16 11 C 0.56 2.29 7.76 -12.44 -0.10 2.19 16 12 O -0.53 -4.28 16.34 5.30 0.09 -4.19 16 13 N -0.73 -0.36 5.51 -61.33 -0.34 -0.70 16 14 C 0.12 0.00 5.66 -4.04 -0.02 -0.02 16 15 C -0.12 0.25 5.17 -26.73 -0.14 0.11 16 16 C -0.11 0.18 3.65 -89.81 -0.33 -0.15 16 17 H 0.10 -0.19 8.13 -51.93 -0.42 -0.61 16 18 C -0.12 0.10 7.47 -25.92 -0.19 -0.09 16 19 C 0.07 -0.04 5.21 -25.93 -0.14 -0.17 16 20 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 21 O -0.56 -0.49 13.67 -35.23 -0.48 -0.97 16 22 C -0.17 0.18 7.46 -25.92 -0.19 -0.01 16 23 C -0.07 -0.03 9.18 -39.22 -0.36 -0.39 16 24 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 25 H 0.08 -0.08 7.52 -51.93 -0.39 -0.47 16 26 H 0.07 -0.19 8.08 -51.93 -0.42 -0.61 16 27 H 0.40 -1.16 9.06 45.56 0.41 -0.75 16 28 H 0.08 -0.02 7.81 -51.93 -0.41 -0.42 16 29 H 0.38 -1.86 8.74 45.56 0.40 -1.47 16 30 H -0.25 -0.98 6.75 56.52 0.38 -0.59 16 31 H -0.25 -0.88 7.11 56.52 0.40 -0.48 16 32 H 0.14 0.76 4.47 -52.49 -0.23 0.53 16 33 H 0.40 -0.95 6.49 -40.82 -0.27 -1.21 16 34 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 35 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.07 -0.16 7.84 -51.93 -0.41 -0.57 16 38 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.09 -0.02 8.10 -51.92 -0.42 -0.44 16 40 H 0.38 -1.16 9.12 45.56 0.42 -0.74 16 41 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 42 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.13 -0.37 6.39 -52.48 -0.34 -0.71 16 LS Contribution 356.56 15.07 5.37 5.37 Total: 0.00 -10.58 356.56 -9.23 -19.81 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -4.66 Total: -12.51 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -3.40 Total: -1.09 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.34 Total: -0.70 kcal Atomic # 8 Polarization: -5.02 SS G_CDS: -1.07 Total: -6.09 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.13 Total: -4.79 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -10.58 -9.23 -19.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.824 kcal (2) G-P(sol) polarization free energy of solvation -10.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.227 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds