Wall clock time and date at job start Tue Mar 9 2021 13:16:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47096 * 2 1 4 4 C 1.50693 * 109.47588 * 120.00611 * 2 1 3 5 5 C 1.38509 * 119.80625 * 245.25641 * 4 2 1 6 6 C 1.37827 * 120.29949 * 180.25956 * 5 4 2 7 7 C 1.39673 * 119.90865 * 359.45626 * 6 5 4 8 8 C 1.47538 * 120.19114 * 180.30224 * 7 6 5 9 9 O 1.21586 * 119.99993 * 180.02562 * 8 7 6 10 10 N 1.34773 * 120.00302 * 0.02562 * 8 7 6 11 11 C 1.46500 * 120.00443 * 179.97438 * 10 8 7 12 12 C 1.52996 * 109.47327 * 180.02562 * 11 10 8 13 13 C 1.52999 * 109.46925 * 180.02562 * 12 11 10 14 14 H 1.08996 * 112.85131 * 316.19371 * 13 12 11 15 15 C 1.53785 * 113.61470 * 87.50481 * 13 12 11 16 16 C 1.53785 * 87.08120 * 139.97964 * 15 13 12 17 17 H 1.08996 * 113.61538 * 89.11617 * 16 15 13 18 18 O 1.42895 * 113.68822 * 220.00716 * 16 15 13 19 19 C 1.53787 * 113.61115 * 185.00029 * 13 12 11 20 20 C 1.40173 * 119.61618 * 0.28669 * 7 6 5 21 21 O 1.35656 * 120.14798 * 180.02562 * 20 7 6 22 22 C 1.38097 * 119.80362 * 64.99413 * 4 2 1 23 23 H 0.96701 * 113.99782 * 299.99084 * 1 2 3 24 24 H 1.09007 * 109.47051 * 240.01114 * 2 1 3 25 25 H 1.48499 * 110.00461 * 300.00566 * 3 2 1 26 26 H 1.48503 * 109.99316 * 61.32422 * 3 2 1 27 27 H 1.08000 * 119.84787 * 0.02562 * 5 4 2 28 28 H 1.08002 * 120.04850 * 179.74235 * 6 5 4 29 29 H 0.96999 * 119.99617 * 0.02562 * 10 8 7 30 30 H 1.09002 * 109.46802 * 300.00682 * 11 10 8 31 31 H 1.09006 * 109.46696 * 60.00027 * 11 10 8 32 32 H 1.09000 * 109.46925 * 300.00002 * 12 11 10 33 33 H 1.08996 * 109.47164 * 59.99790 * 12 11 10 34 34 H 1.08997 * 113.60972 * 254.52629 * 15 13 12 35 35 H 1.08995 * 113.61507 * 25.42966 * 15 13 12 36 36 H 0.96701 * 114.00372 * 277.53514 * 18 16 15 37 37 H 1.09004 * 113.61644 * 334.56234 * 19 13 12 38 38 H 1.08991 * 113.61510 * 105.46999 * 19 13 12 39 39 H 0.96701 * 113.99732 * 90.00449 * 21 20 7 40 40 H 1.07997 * 119.96285 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.6352 -0.0060 2.1930 6 6 3.1041 -0.6468 3.3196 7 6 2.8592 -2.0102 3.4980 8 6 3.3524 -2.7009 4.7048 9 8 3.1377 -3.8881 4.8563 10 7 4.0410 -2.0161 5.6393 11 6 4.5302 -2.7018 6.8379 12 6 5.2728 -1.7041 7.7290 13 6 5.7842 -2.4204 8.9804 14 1 5.0438 -3.0907 9.4168 15 6 7.1694 -3.0634 8.7994 16 6 7.4929 -2.5801 10.2230 17 1 7.2207 -3.2952 10.9993 18 8 8.8233 -2.0801 10.3711 19 6 6.4419 -1.4792 10.0035 20 6 2.1420 -2.7185 2.5240 21 8 1.8976 -4.0429 2.6865 22 6 1.6827 -2.0590 1.3938 23 1 -0.3933 0.4416 0.7651 24 1 1.7924 -0.5137 -0.8901 25 1 1.5614 2.4680 -1.2084 26 1 1.5879 2.4584 1.2244 27 1 2.8208 1.0494 2.0584 28 1 3.6560 -0.0944 4.0657 29 1 4.2119 -1.0689 5.5186 30 1 3.6867 -3.1207 7.3866 31 1 5.2084 -3.5038 6.5463 32 1 6.1162 -1.2848 7.1804 33 1 4.5943 -0.9023 8.0205 34 1 7.1377 -4.1487 8.7034 35 1 7.7747 -2.5868 8.0284 36 1 9.4889 -2.7678 10.5094 37 1 6.8483 -0.5694 9.5616 38 1 5.8230 -1.2855 10.8795 39 1 1.0718 -4.2364 3.1509 40 1 1.1299 -2.6007 0.6407 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:28 Heat of formation + Delta-G solvation = -107.326133 kcal Electronic energy + Delta-G solvation = -22903.925602 eV Core-core repulsion = 19265.252396 eV Total energy + Delta-G solvation = -3638.673206 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.61981 -40.56390 -39.82502 -38.49029 -37.23938 -36.75843 -35.55478 -33.18603 -31.31384 -31.13239 -27.69233 -26.80268 -25.61378 -23.98488 -23.33930 -22.65985 -21.55728 -20.54499 -19.50383 -18.76949 -18.37767 -18.29708 -17.37310 -16.82018 -16.59015 -16.47820 -16.26980 -16.08409 -15.82746 -15.41534 -15.34979 -15.08796 -14.94806 -14.33123 -14.16070 -13.76565 -13.48712 -13.39755 -13.26069 -12.99919 -12.76263 -12.53537 -12.42089 -12.10915 -12.07983 -11.76926 -11.63251 -11.28884 -10.90367 -10.76291 -10.62960 -10.21967 -10.04615 -9.81210 -5.06559 -0.42619 0.08117 1.13972 1.47533 1.76126 1.86305 2.06565 2.57290 3.06015 3.17390 3.27768 3.38151 3.41475 3.50912 3.59634 3.67660 3.70432 3.87730 3.93972 4.02355 4.17786 4.19636 4.27171 4.33092 4.47010 4.55083 4.60331 4.67316 4.72939 4.74299 4.85170 4.90578 4.94074 5.00546 5.11045 5.15119 5.17262 5.35786 5.37855 5.50709 6.26263 6.43452 6.66813 6.69393 7.21655 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.691 3.309 4 C -0.074 4.074 5 C -0.137 4.137 6 C -0.065 4.065 7 C -0.163 4.163 8 C 0.557 3.443 9 O -0.518 6.518 10 N -0.730 5.730 11 C 0.121 3.879 12 C -0.119 4.119 13 C -0.107 4.107 14 H 0.097 0.903 15 C -0.166 4.166 16 C 0.073 3.927 17 H 0.082 0.918 18 O -0.561 6.561 19 C -0.124 4.124 20 C 0.172 3.828 21 O -0.476 6.476 22 C -0.128 4.128 23 H 0.377 0.623 24 H 0.123 0.877 25 H -0.255 1.255 26 H -0.258 1.258 27 H 0.136 0.864 28 H 0.134 0.866 29 H 0.399 0.601 30 H 0.069 0.931 31 H 0.070 0.930 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.070 0.930 35 H 0.090 0.910 36 H 0.379 0.621 37 H 0.091 0.909 38 H 0.074 0.926 39 H 0.398 0.602 40 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.535 3.486 1.881 4.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.075 4.075 5 C -0.155 4.155 6 C -0.084 4.084 7 C -0.167 4.167 8 C 0.344 3.656 9 O -0.394 6.394 10 N -0.383 5.383 11 C -0.002 4.002 12 C -0.157 4.157 13 C -0.126 4.126 14 H 0.115 0.885 15 C -0.204 4.204 16 C 0.014 3.986 17 H 0.100 0.900 18 O -0.367 6.367 19 C -0.162 4.162 20 C 0.126 3.874 21 O -0.287 6.287 22 C -0.147 4.147 23 H 0.225 0.775 24 H 0.141 0.859 25 H -0.180 1.180 26 H -0.183 1.183 27 H 0.154 0.846 28 H 0.151 0.849 29 H 0.234 0.766 30 H 0.087 0.913 31 H 0.089 0.911 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.089 0.911 35 H 0.109 0.891 36 H 0.227 0.773 37 H 0.110 0.890 38 H 0.093 0.907 39 H 0.256 0.744 40 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.475 3.621 1.089 4.059 hybrid contribution -1.116 -0.300 0.819 1.417 sum 0.359 3.321 1.908 3.847 Atomic orbital electron populations 1.86638 1.17318 1.79989 1.49314 1.25159 0.84250 1.11409 0.98260 0.94850 0.91548 0.73986 0.80417 1.20374 0.96847 0.94105 0.96192 1.21001 0.99913 1.00228 0.94357 1.21147 0.97361 0.92555 0.97337 1.20439 1.05493 0.94409 0.96382 1.18044 0.78386 0.86661 0.82499 1.90839 1.56403 1.14552 1.77608 1.45929 1.57312 1.13349 1.21715 1.21386 0.98504 0.95472 0.84884 1.21751 1.00437 0.98098 0.95434 1.22238 0.96419 0.98318 0.95581 0.88484 1.23791 0.96753 1.01202 0.98669 1.23345 0.82881 0.96660 0.95670 0.90040 1.86526 1.17028 1.37834 1.95292 1.23123 0.95924 0.97963 0.99181 1.18512 0.93775 0.83484 0.91664 1.84761 1.46155 1.17982 1.79835 1.21354 1.00952 0.93901 0.98491 0.77543 0.85926 1.17998 1.18296 0.84641 0.84851 0.76586 0.91258 0.91137 0.90835 0.90820 0.91084 0.89099 0.77331 0.89029 0.90687 0.74368 0.84182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.08 12.83 -35.23 -0.45 -0.53 16 2 C -0.08 0.11 2.79 36.00 0.10 0.21 16 3 Si 0.69 -1.55 29.87 -169.99 -5.08 -6.63 16 4 C -0.07 0.06 5.35 -104.58 -0.56 -0.50 16 5 C -0.14 0.27 8.64 -39.63 -0.34 -0.08 16 6 C -0.07 0.11 9.54 -39.20 -0.37 -0.26 16 7 C -0.16 -0.18 5.89 -104.84 -0.62 -0.80 16 8 C 0.56 1.45 7.76 -12.47 -0.10 1.35 16 9 O -0.52 -3.31 15.16 -16.58 -0.25 -3.56 16 10 N -0.73 0.43 5.51 -61.35 -0.34 0.09 16 11 C 0.12 -0.09 5.66 -4.04 -0.02 -0.11 16 12 C -0.12 0.32 5.17 -26.73 -0.14 0.18 16 13 C -0.11 0.22 3.65 -89.80 -0.33 -0.10 16 14 H 0.10 -0.23 8.13 -51.93 -0.42 -0.66 16 15 C -0.17 0.24 7.47 -25.91 -0.19 0.05 16 16 C 0.07 -0.06 5.21 -25.91 -0.14 -0.20 16 17 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 18 O -0.56 -0.33 13.67 -35.23 -0.48 -0.81 16 19 C -0.12 0.15 7.47 -25.91 -0.19 -0.04 16 20 C 0.17 0.33 6.72 -38.69 -0.26 0.07 16 21 O -0.48 -1.38 11.58 -40.54 -0.47 -1.85 16 22 C -0.13 -0.07 9.60 -39.47 -0.38 -0.45 16 23 H 0.38 -1.06 8.70 45.56 0.40 -0.67 16 24 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 25 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 26 H -0.26 0.19 6.99 56.52 0.40 0.59 16 27 H 0.14 -0.53 4.80 -52.49 -0.25 -0.78 16 28 H 0.13 -0.62 6.40 -52.49 -0.34 -0.96 16 29 H 0.40 -1.36 6.50 -40.82 -0.27 -1.63 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.07 -0.20 7.84 -51.93 -0.41 -0.61 16 33 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.09 -0.07 7.89 -51.93 -0.41 -0.48 16 36 H 0.38 -1.25 9.12 45.56 0.42 -0.84 16 37 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.40 -0.31 9.06 45.56 0.41 0.11 16 40 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 LS Contribution 335.07 15.07 5.05 5.05 Total: 0.00 -9.99 335.07 -9.43 -19.41 By element: Atomic # 1 Polarization: -6.60 SS G_CDS: -3.87 Total: -10.47 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -3.54 Total: -0.69 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -0.34 Total: 0.09 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -1.65 Total: -6.76 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.08 Total: -6.63 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -9.99 -9.43 -19.41 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.915 kcal (2) G-P(sol) polarization free energy of solvation -9.986 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.901 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds