Wall clock time and date at job start Tue Mar 9 2021 13:16:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00642 * 6 5 4 8 8 Si 1.86298 * 109.47388 * 165.00260 * 6 5 4 9 9 C 1.37629 * 120.06996 * 180.02562 * 5 4 2 10 10 C 1.39773 * 119.92914 * 359.97387 * 9 5 4 11 11 C 1.47522 * 120.06904 * 180.02562 * 10 9 5 12 12 O 1.21598 * 119.99463 * 0.02562 * 11 10 9 13 13 N 1.34770 * 120.00215 * 179.97438 * 11 10 9 14 14 C 1.46505 * 120.00444 * 179.97438 * 13 11 10 15 15 C 1.52994 * 109.47508 * 180.02562 * 14 13 11 16 16 C 1.52999 * 109.47209 * 180.02562 * 15 14 13 17 17 H 1.09006 * 112.84913 * 43.80464 * 16 15 14 18 18 C 1.53776 * 113.61399 * 174.99933 * 16 15 14 19 19 C 1.53785 * 87.08081 * 139.98044 * 18 16 15 20 20 H 1.09004 * 113.60972 * 89.19959 * 19 18 16 21 21 O 1.42898 * 113.61589 * 220.01559 * 19 18 16 22 22 C 1.53783 * 87.08172 * 334.56923 * 19 18 16 23 23 C 1.39820 * 119.86343 * 0.02562 * 10 9 5 24 24 C 1.37582 * 119.92895 * 359.74018 * 23 10 9 25 25 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 26 26 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 27 27 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 28 28 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 29 29 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 31 31 H 1.08998 * 109.47004 * 45.00152 * 6 5 4 32 32 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 33 33 H 1.48493 * 110.00585 * 178.68161 * 8 6 5 34 34 H 1.48504 * 109.99992 * 300.00460 * 8 6 5 35 35 H 1.08000 * 120.03577 * 179.97438 * 9 5 4 36 36 H 0.97006 * 120.00435 * 0.02562 * 13 11 10 37 37 H 1.08998 * 109.46860 * 300.00793 * 14 13 11 38 38 H 1.09005 * 109.46579 * 59.99945 * 14 13 11 39 39 H 1.09002 * 109.46992 * 300.00645 * 15 14 13 40 40 H 1.08995 * 109.46841 * 60.00276 * 15 14 13 41 41 H 1.09000 * 113.61690 * 254.53025 * 18 16 15 42 42 H 1.08999 * 113.61664 * 25.43677 * 18 16 15 43 43 H 0.96702 * 113.99796 * 180.02562 * 21 19 18 44 44 H 1.08997 * 113.61225 * 270.88516 * 22 19 18 45 45 H 1.08996 * 113.61442 * 139.97901 * 22 19 18 46 46 H 1.08002 * 120.03086 * 180.02562 * 23 10 9 47 47 H 1.08002 * 119.96336 * 180.25454 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 4.0867 -1.3442 1.0976 8 14 3.8119 -3.9734 0.5502 9 6 3.2744 -2.5525 -1.9156 10 6 2.9607 -2.1696 -3.2228 11 6 3.4893 -2.9388 -4.3652 12 8 4.1983 -3.9072 -4.1701 13 7 3.1856 -2.5688 -5.6251 14 6 3.7110 -3.3323 -6.7597 15 6 3.2204 -2.7063 -8.0667 16 6 3.7686 -3.5041 -9.2515 17 1 3.6965 -4.5820 -9.1058 18 6 3.2348 -3.0296 -10.6134 19 6 4.6558 -3.2500 -11.1587 20 1 4.8270 -4.2581 -11.5362 21 8 5.0826 -2.2360 -12.0706 22 6 5.1562 -3.0355 -9.7205 23 6 2.1449 -1.0561 -3.4454 24 6 1.6491 -0.3440 -2.3777 25 1 -0.3634 -1.0252 0.0708 26 1 -0.3633 0.4513 -0.9233 27 1 -0.3633 0.5740 0.8525 28 1 1.6461 1.8947 0.8901 29 1 3.0851 1.3422 0.0005 30 1 1.6460 1.8948 -0.8900 31 1 2.2160 -2.2181 1.1701 32 1 3.7923 -0.4238 1.1320 33 1 4.1790 -4.3794 1.9306 34 1 2.8133 -4.9197 -0.0089 35 1 3.9046 -3.4119 -1.7405 36 1 2.6197 -1.7964 -5.7807 37 1 4.8006 -3.3154 -6.7356 38 1 3.3622 -4.3631 -6.6966 39 1 2.1308 -2.7229 -8.0909 40 1 3.5696 -1.6757 -8.1294 41 1 2.4918 -3.6982 -11.0481 42 1 2.9217 -1.9856 -10.6200 43 1 5.9754 -2.3694 -12.4173 44 1 5.3683 -1.9931 -9.4829 45 1 5.9642 -3.7088 -9.4344 46 1 1.9005 -0.7582 -4.4543 47 1 1.0155 0.5137 -2.5489 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:32 Heat of formation + Delta-G solvation = -57.058923 kcal Electronic energy + Delta-G solvation = -26858.551059 eV Core-core repulsion = 23008.701027 eV Total energy + Delta-G solvation = -3849.850032 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.177 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.74040 -40.64121 -40.18048 -37.72082 -37.35887 -36.81535 -35.66299 -33.04748 -31.90909 -30.84460 -28.59885 -26.93663 -26.78496 -26.57636 -25.05593 -23.23994 -22.90494 -22.57465 -21.16401 -20.39883 -19.19720 -18.38227 -18.09590 -17.75037 -17.42599 -16.74301 -16.58291 -16.37295 -16.18773 -15.94211 -15.41427 -15.36114 -15.29310 -15.18273 -15.01404 -14.54868 -14.23100 -14.12870 -13.95358 -13.51455 -13.38360 -13.32644 -13.09276 -12.98866 -12.73755 -12.67851 -12.62791 -12.45258 -12.21147 -11.95194 -11.66003 -11.41831 -11.30590 -11.15604 -11.03499 -10.65025 -10.26216 -10.10730 -9.80029 -9.63319 -4.93064 -0.41913 0.13684 1.32126 1.53219 1.65975 1.85196 2.04375 2.61721 2.71756 3.32286 3.48564 3.53679 3.62217 3.65341 3.70008 3.81350 3.89463 4.00994 4.02397 4.09194 4.13548 4.17759 4.28644 4.33977 4.39089 4.40855 4.44506 4.57019 4.63491 4.64023 4.69195 4.75578 4.83310 4.86696 4.92718 4.96662 4.96989 5.00285 5.03813 5.11822 5.15772 5.19648 5.28458 5.35033 5.51454 5.51965 5.75230 6.18576 6.43087 6.62472 6.88411 7.10432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.528 5.528 3 C 0.023 3.977 4 C 0.125 3.875 5 C -0.113 4.113 6 C -0.058 4.058 7 O -0.544 6.544 8 Si 0.772 3.228 9 C -0.059 4.059 10 C -0.147 4.147 11 C 0.555 3.445 12 O -0.575 6.575 13 N -0.712 5.712 14 C 0.121 3.879 15 C -0.109 4.109 16 C -0.101 4.101 17 H 0.102 0.898 18 C -0.127 4.127 19 C 0.066 3.934 20 H 0.092 0.908 21 O -0.584 6.584 22 C -0.165 4.165 23 C -0.059 4.059 24 C -0.152 4.152 25 H 0.062 0.938 26 H 0.045 0.955 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.072 0.928 30 H 0.043 0.957 31 H 0.080 0.920 32 H 0.373 0.627 33 H -0.286 1.286 34 H -0.274 1.274 35 H 0.137 0.863 36 H 0.415 0.585 37 H 0.060 0.940 38 H 0.062 0.938 39 H 0.085 0.915 40 H 0.078 0.922 41 H 0.078 0.922 42 H 0.084 0.916 43 H 0.393 0.607 44 H 0.084 0.916 45 H 0.072 0.928 46 H 0.161 0.839 47 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.326 5.017 -3.752 7.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.250 5.250 3 C -0.123 4.123 4 C 0.031 3.969 5 C -0.114 4.114 6 C -0.167 4.167 7 O -0.351 6.351 8 Si 0.676 3.324 9 C -0.078 4.078 10 C -0.150 4.150 11 C 0.343 3.657 12 O -0.456 6.456 13 N -0.365 5.365 14 C -0.003 4.003 15 C -0.147 4.147 16 C -0.120 4.120 17 H 0.120 0.880 18 C -0.165 4.165 19 C 0.007 3.993 20 H 0.109 0.891 21 O -0.392 6.392 22 C -0.202 4.202 23 C -0.078 4.078 24 C -0.172 4.172 25 H 0.081 0.919 26 H 0.064 0.936 27 H 0.106 0.894 28 H 0.107 0.893 29 H 0.091 0.909 30 H 0.062 0.938 31 H 0.098 0.902 32 H 0.223 0.777 33 H -0.213 1.213 34 H -0.200 1.200 35 H 0.154 0.846 36 H 0.253 0.747 37 H 0.078 0.922 38 H 0.080 0.920 39 H 0.103 0.897 40 H 0.097 0.903 41 H 0.097 0.903 42 H 0.102 0.898 43 H 0.243 0.757 44 H 0.102 0.898 45 H 0.091 0.909 46 H 0.178 0.822 47 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -3.018 3.011 -2.737 5.066 hybrid contribution -1.058 1.346 -0.391 1.756 sum -4.076 4.357 -3.128 6.737 Atomic orbital electron populations 1.22526 0.84414 1.02773 1.02406 1.59450 1.09813 1.15410 1.40301 1.22588 1.01021 0.86048 1.02616 1.18969 0.94521 0.93434 0.89995 1.20192 0.99060 0.96300 0.95883 1.25148 0.96140 1.04781 0.90680 1.86696 1.41707 1.21779 1.84921 0.92247 0.87578 0.71256 0.81347 1.21077 0.96909 0.98491 0.91362 1.19891 1.03242 0.98970 0.92859 1.18393 0.79875 0.83626 0.83808 1.90795 1.39431 1.29382 1.85991 1.45822 1.52563 1.33279 1.04814 1.21406 0.98860 0.95497 0.84496 1.21674 1.01991 0.99762 0.91257 1.22214 0.95887 1.00669 0.93203 0.87991 1.23134 0.95640 1.02530 0.95173 1.23512 0.96361 0.91541 0.87845 0.89066 1.86482 1.38227 1.50457 1.64037 1.23748 0.97535 1.02245 0.96698 1.21459 0.93489 0.92065 1.00802 1.21826 1.01696 1.01541 0.92121 0.91899 0.93604 0.89446 0.89330 0.90879 0.93795 0.90221 0.77727 1.21272 1.20022 0.84577 0.74735 0.92171 0.91965 0.89652 0.90324 0.90298 0.89761 0.75736 0.89780 0.90884 0.82156 0.83052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.12 9.33 127.69 1.19 1.08 16 2 N -0.53 1.32 3.70 -745.08 -2.76 -1.44 16 3 C 0.02 -0.14 9.00 127.69 1.15 1.01 16 4 C 0.13 -0.02 4.65 38.47 0.18 0.16 16 5 C -0.11 -0.40 5.28 -19.78 -0.10 -0.50 16 6 C -0.06 -0.26 2.29 71.24 0.16 -0.10 16 7 O -0.54 -2.88 12.65 -148.98 -1.89 -4.77 16 8 Si 0.77 4.51 30.17 68.60 2.07 6.58 16 9 C -0.06 -0.30 8.19 22.50 0.18 -0.12 16 10 C -0.15 -0.37 5.88 -20.08 -0.12 -0.49 16 11 C 0.55 2.95 7.76 86.69 0.67 3.62 16 12 O -0.58 -7.90 16.34 -4.03 -0.07 -7.97 16 13 N -0.71 1.33 5.50 -466.28 -2.57 -1.23 16 14 C 0.12 -0.22 5.66 86.38 0.49 0.27 16 15 C -0.11 0.69 5.16 30.59 0.16 0.85 16 16 C -0.10 0.49 3.65 -10.27 -0.04 0.45 16 17 H 0.10 -0.56 8.13 -2.38 -0.02 -0.58 16 18 C -0.13 0.36 7.47 31.12 0.23 0.59 16 19 C 0.07 -0.13 5.21 31.12 0.16 0.03 16 20 H 0.09 -0.39 8.14 -2.39 -0.02 -0.40 16 21 O -0.58 -0.69 13.67 -148.98 -2.04 -2.73 16 22 C -0.16 0.52 7.46 31.12 0.23 0.76 16 23 C -0.06 0.23 9.53 22.50 0.21 0.44 16 24 C -0.15 0.57 8.57 22.36 0.19 0.76 16 25 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.05 -0.30 7.08 -2.39 -0.02 -0.32 16 27 H 0.09 -0.56 8.14 -2.38 -0.02 -0.58 16 28 H 0.09 -0.67 8.14 -2.38 -0.02 -0.69 16 29 H 0.07 -0.40 7.51 -2.39 -0.02 -0.42 16 30 H 0.04 -0.32 7.46 -2.39 -0.02 -0.34 16 31 H 0.08 0.35 7.77 -2.39 -0.02 0.34 16 32 H 0.37 0.28 7.56 -74.06 -0.56 -0.28 16 33 H -0.29 -3.18 7.11 99.48 0.71 -2.47 16 34 H -0.27 -2.58 7.11 99.48 0.71 -1.87 16 35 H 0.14 0.83 4.70 -2.91 -0.01 0.82 16 36 H 0.41 -3.51 6.49 -92.70 -0.60 -4.11 16 37 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 38 H 0.06 0.02 8.14 -2.38 -0.02 0.01 16 39 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 40 H 0.08 -0.54 7.84 -2.39 -0.02 -0.56 16 41 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 42 H 0.08 -0.11 8.10 -2.39 -0.02 -0.13 16 43 H 0.39 -2.57 9.12 -74.06 -0.68 -3.24 16 44 H 0.08 -0.15 7.90 -2.39 -0.02 -0.17 16 45 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 46 H 0.16 -1.77 6.39 -2.91 -0.02 -1.79 16 47 H 0.15 -1.23 7.01 -2.91 -0.02 -1.25 16 Total: 0.00 -19.13 377.71 -3.08 -22.21 By element: Atomic # 1 Polarization: -18.68 SS G_CDS: -0.80 Total: -19.48 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: 4.96 Total: 8.81 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -5.33 Total: -2.67 kcal Atomic # 8 Polarization: -11.47 SS G_CDS: -3.99 Total: -15.46 kcal Atomic # 14 Polarization: 4.51 SS G_CDS: 2.07 Total: 6.58 kcal Total: -19.13 -3.08 -22.21 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.848 kcal (2) G-P(sol) polarization free energy of solvation -19.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds