Wall clock time and date at job start Tue Mar 9 2021 13:18:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86297 * 109.47241 * 2 1 4 4 C 1.50705 * 109.47388 * 120.00139 * 2 1 3 5 5 C 1.38709 * 120.02672 * 75.01909 * 4 2 1 6 6 O 1.35895 * 120.05826 * 359.96119 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 C 1.53008 * 109.46802 * 179.97438 * 11 10 8 13 13 C 1.52997 * 109.46888 * 179.97438 * 12 11 10 14 14 H 1.09008 * 112.85515 * 314.66686 * 13 12 11 15 15 C 1.53780 * 113.61431 * 85.86274 * 13 12 11 16 16 C 1.53952 * 87.02210 * 139.95016 * 15 13 12 17 17 H 1.09006 * 113.53551 * 89.18659 * 16 15 13 18 18 O 1.42900 * 113.74355 * 220.05698 * 16 15 13 19 19 C 1.53777 * 113.61469 * 183.46933 * 13 12 11 20 20 C 1.38759 * 119.88803 * 179.97438 * 5 4 2 21 21 C 1.38126 * 119.94113 * 359.97438 * 20 5 4 22 22 C 1.38290 * 120.05768 * 359.97438 * 21 20 5 23 23 C 1.38164 * 120.02639 * 255.00220 * 4 2 1 24 24 H 0.96704 * 114.00005 * 299.99900 * 1 2 3 25 25 H 1.09006 * 109.47457 * 240.00019 * 2 1 3 26 26 H 1.48496 * 110.00176 * 299.99979 * 3 2 1 27 27 H 1.48504 * 110.00071 * 61.31773 * 3 2 1 28 28 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 29 29 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 30 30 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 31 31 H 1.09000 * 109.47300 * 299.99482 * 11 10 8 32 32 H 1.08994 * 109.47756 * 59.99856 * 11 10 8 33 33 H 1.08994 * 109.47079 * 299.99171 * 12 11 10 34 34 H 1.09003 * 109.47336 * 60.00020 * 12 11 10 35 35 H 1.09001 * 113.61916 * 254.52816 * 15 13 12 36 36 H 1.08997 * 113.61516 * 25.42964 * 15 13 12 37 37 H 0.96705 * 114.00133 * 277.59389 * 18 16 15 38 38 H 1.09000 * 113.61467 * 334.56621 * 19 13 12 39 39 H 1.08998 * 113.61696 * 105.38739 * 19 13 12 40 40 H 1.07998 * 120.02758 * 179.97438 * 20 5 4 41 41 H 1.07995 * 119.97120 * 179.97438 * 21 20 5 42 42 H 1.07995 * 119.94278 * 180.27458 * 22 21 20 43 43 H 1.08005 * 119.97654 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8701 -2.0941 1.3067 6 8 1.3563 -2.8107 0.2727 7 6 1.3241 -4.2317 0.4208 8 6 0.7257 -4.8521 -0.8154 9 8 0.3621 -4.1469 -1.7326 10 7 0.5936 -6.1906 -0.9010 11 6 0.0124 -6.7938 -2.1030 12 6 -0.0222 -8.3152 -1.9443 13 6 -0.6298 -8.9451 -3.1992 14 1 -1.5305 -8.4322 -3.5368 15 6 0.3931 -9.1954 -4.3199 16 6 -0.3326 -10.5290 -4.5747 17 1 -1.1516 -10.4492 -5.2897 18 8 0.5479 -11.6180 -4.8588 19 6 -0.7883 -10.4720 -3.1071 20 6 2.3340 -2.7453 2.4408 21 6 2.8559 -2.0146 3.4904 22 6 2.9169 -0.6353 3.4114 23 6 2.4537 0.0159 2.2833 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2084 27 1 1.5878 2.4586 1.2242 28 1 2.3384 -4.6054 0.5608 29 1 0.7177 -4.4929 1.2880 30 1 0.8840 -6.7547 -0.1672 31 1 -1.0017 -6.4197 -2.2432 32 1 0.6190 -6.5331 -2.9701 33 1 0.9920 -8.6891 -1.8044 34 1 -0.6287 -8.5765 -1.0770 35 1 0.3157 -8.4901 -5.1473 36 1 1.4147 -9.3161 -3.9596 37 1 0.8380 -11.6592 -5.7804 38 1 -0.0903 -10.9424 -2.4146 39 1 -1.8180 -10.7957 -2.9554 40 1 2.2870 -3.8225 2.5027 41 1 3.2167 -2.5209 4.3734 42 1 3.3294 -0.0662 4.2313 43 1 2.5023 1.0932 2.2242 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_2989392.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:35 Heat of formation + Delta-G solvation = -99.329469 kcal Electronic energy + Delta-G solvation = -24572.454541 eV Core-core repulsion = 20778.590477 eV Total energy + Delta-G solvation = -3793.864064 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.58163 -40.73472 -40.24438 -38.49930 -37.46559 -36.80519 -35.61433 -32.79346 -32.12203 -31.13461 -29.25025 -26.82293 -26.61362 -25.59684 -23.51863 -22.70555 -22.60043 -21.58629 -20.55013 -19.49342 -18.56428 -18.28643 -17.91167 -17.53472 -17.05888 -16.90519 -16.58818 -16.47542 -16.03923 -15.77161 -15.60321 -15.40922 -15.04407 -15.00099 -14.75959 -14.19738 -14.11655 -13.61606 -13.53265 -13.48906 -13.38166 -13.03774 -12.79005 -12.57805 -12.48416 -12.16126 -12.09763 -11.83404 -11.78017 -11.55266 -11.30768 -10.90479 -10.72608 -10.39021 -10.18904 -10.00919 -9.21489 -4.88616 0.20370 0.40109 1.38435 1.46805 1.52804 1.63804 2.04758 2.56485 2.67050 3.16490 3.37376 3.47584 3.50220 3.55120 3.66850 3.72779 3.79067 3.86044 3.86966 3.89874 3.98285 4.02515 4.16297 4.24194 4.26002 4.33342 4.45647 4.51229 4.58031 4.71131 4.71622 4.73112 4.83027 4.89152 4.97845 4.99353 5.13626 5.24893 5.28441 5.31288 5.35011 5.47394 5.68183 6.23572 6.38858 6.60697 6.65906 7.11884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.146 4.146 5 C 0.152 3.848 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.514 3.486 9 O -0.508 6.508 10 N -0.730 5.730 11 C 0.121 3.879 12 C -0.119 4.119 13 C -0.107 4.107 14 H 0.097 0.903 15 C -0.167 4.167 16 C 0.074 3.926 17 H 0.082 0.918 18 O -0.561 6.561 19 C -0.124 4.124 20 C -0.212 4.212 21 C -0.072 4.072 22 C -0.151 4.151 23 C -0.083 4.083 24 H 0.370 0.630 25 H 0.118 0.882 26 H -0.257 1.257 27 H -0.260 1.260 28 H 0.094 0.906 29 H 0.093 0.907 30 H 0.402 0.598 31 H 0.070 0.930 32 H 0.071 0.929 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.071 0.929 36 H 0.090 0.910 37 H 0.379 0.621 38 H 0.091 0.909 39 H 0.075 0.925 40 H 0.129 0.871 41 H 0.128 0.872 42 H 0.129 0.871 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.009 -3.273 3.412 5.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.591 3.409 4 C -0.147 4.147 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.298 3.702 9 O -0.382 6.382 10 N -0.384 5.384 11 C -0.002 4.002 12 C -0.157 4.157 13 C -0.126 4.126 14 H 0.115 0.885 15 C -0.205 4.205 16 C 0.015 3.985 17 H 0.100 0.900 18 O -0.367 6.367 19 C -0.162 4.162 20 C -0.231 4.231 21 C -0.090 4.090 22 C -0.169 4.169 23 C -0.101 4.101 24 H 0.216 0.784 25 H 0.136 0.864 26 H -0.182 1.182 27 H -0.186 1.186 28 H 0.112 0.888 29 H 0.111 0.889 30 H 0.236 0.764 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.092 0.908 34 H 0.092 0.908 35 H 0.090 0.910 36 H 0.109 0.891 37 H 0.227 0.773 38 H 0.110 0.890 39 H 0.094 0.906 40 H 0.147 0.853 41 H 0.146 0.854 42 H 0.147 0.853 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.436 -2.264 2.597 4.220 hybrid contribution -0.789 -0.636 0.575 1.165 sum 1.647 -2.899 3.172 4.603 Atomic orbital electron populations 1.86706 1.17575 1.79615 1.48647 1.24907 0.84009 1.10330 0.98257 0.95119 0.91434 0.74461 0.79918 1.19639 1.05631 0.90986 0.98420 1.18800 0.93052 0.90840 0.86714 1.86237 1.77349 1.16839 1.38510 1.22471 1.02493 0.81411 0.97585 1.20017 0.79385 0.82459 0.88318 1.90805 1.47213 1.61018 1.39119 1.45825 1.65146 1.06307 1.21147 1.21404 0.99215 0.92406 0.87137 1.21747 1.01990 0.93469 0.98450 1.22241 0.99408 0.95675 0.95279 0.88457 1.23817 0.99569 0.98012 0.99054 1.23374 0.92266 0.85784 0.97114 0.90026 1.86527 1.66670 1.50253 1.33225 1.23113 1.02150 0.95134 0.95777 1.21298 1.06483 1.00438 0.94879 1.21027 0.96262 0.94098 0.97658 1.21064 1.02722 0.94570 0.98593 1.21047 0.96572 0.99937 0.92547 0.78362 0.86428 1.18204 1.18559 0.88814 0.88901 0.76396 0.91129 0.91081 0.90811 0.90750 0.91047 0.89123 0.77320 0.89038 0.90649 0.85276 0.85368 0.85322 0.84767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.23 12.88 -35.23 -0.45 -2.69 16 2 C -0.07 -0.16 2.38 36.01 0.09 -0.08 16 3 Si 0.69 0.31 30.25 -169.99 -5.14 -4.83 16 4 C -0.15 -0.28 5.27 -104.47 -0.55 -0.83 16 5 C 0.15 0.35 6.66 -39.21 -0.26 0.08 16 6 O -0.28 -1.01 9.00 -39.32 -0.35 -1.36 16 7 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 8 C 0.51 1.07 7.91 -10.99 -0.09 0.98 16 9 O -0.51 -3.76 16.50 -14.35 -0.24 -4.00 16 10 N -0.73 0.97 5.56 -60.29 -0.33 0.63 16 11 C 0.12 -0.11 5.67 -4.04 -0.02 -0.13 16 12 C -0.12 0.33 5.15 -26.73 -0.14 0.20 16 13 C -0.11 0.22 3.64 -89.81 -0.33 -0.10 16 14 H 0.10 -0.22 8.14 -51.92 -0.42 -0.65 16 15 C -0.17 0.24 7.48 -25.83 -0.19 0.05 16 16 C 0.07 -0.06 5.21 -25.83 -0.13 -0.19 16 17 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 18 O -0.56 -0.35 13.68 -35.23 -0.48 -0.83 16 19 C -0.12 0.15 7.47 -25.92 -0.19 -0.05 16 20 C -0.21 0.00 9.04 -39.43 -0.36 -0.36 16 21 C -0.07 0.05 10.04 -39.60 -0.40 -0.35 16 22 C -0.15 0.07 10.04 -39.56 -0.40 -0.33 16 23 C -0.08 -0.03 8.66 -39.61 -0.34 -0.37 16 24 H 0.37 0.29 8.70 45.56 0.40 0.68 16 25 H 0.12 0.41 7.83 -51.93 -0.41 0.00 16 26 H -0.26 -0.99 7.11 56.52 0.40 -0.59 16 27 H -0.26 -0.38 6.69 56.52 0.38 0.00 16 28 H 0.09 -0.29 7.66 -51.93 -0.40 -0.68 16 29 H 0.09 -0.25 7.66 -51.93 -0.40 -0.65 16 30 H 0.40 -1.86 8.47 -40.82 -0.35 -2.20 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 -0.22 7.88 -51.93 -0.41 -0.63 16 34 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 35 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.09 -0.08 7.92 -51.93 -0.41 -0.49 16 37 H 0.38 -1.24 9.12 45.56 0.42 -0.83 16 38 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 39 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.13 -0.32 6.30 -52.49 -0.33 -0.66 16 41 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 42 H 0.13 -0.30 8.06 -52.49 -0.42 -0.73 16 43 H 0.13 -0.15 4.86 -52.48 -0.26 -0.40 16 LS Contribution 359.09 15.07 5.41 5.41 Total: 0.00 -10.86 359.09 -10.31 -21.17 By element: Atomic # 1 Polarization: -6.61 SS G_CDS: -5.59 Total: -12.20 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -3.13 Total: -1.31 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.33 Total: 0.63 kcal Atomic # 8 Polarization: -7.35 SS G_CDS: -1.53 Total: -8.88 kcal Atomic # 14 Polarization: 0.31 SS G_CDS: -5.14 Total: -4.83 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -10.86 -10.31 -21.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_2989392.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.158 kcal (2) G-P(sol) polarization free energy of solvation -10.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds