Wall clock time and date at job start Tue Mar 9 2021 13:18:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86297 * 109.47241 * 2 1 4 4 C 1.50705 * 109.47388 * 120.00139 * 2 1 3 5 5 C 1.38709 * 120.02672 * 75.01909 * 4 2 1 6 6 O 1.35895 * 120.05826 * 359.96119 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 C 1.53008 * 109.46802 * 179.97438 * 11 10 8 13 13 C 1.52997 * 109.46888 * 179.97438 * 12 11 10 14 14 H 1.09008 * 112.85515 * 314.66686 * 13 12 11 15 15 C 1.53780 * 113.61431 * 85.86274 * 13 12 11 16 16 C 1.53952 * 87.02210 * 139.95016 * 15 13 12 17 17 H 1.09006 * 113.53551 * 89.18659 * 16 15 13 18 18 O 1.42900 * 113.74355 * 220.05698 * 16 15 13 19 19 C 1.53777 * 113.61469 * 183.46933 * 13 12 11 20 20 C 1.38759 * 119.88803 * 179.97438 * 5 4 2 21 21 C 1.38126 * 119.94113 * 359.97438 * 20 5 4 22 22 C 1.38290 * 120.05768 * 359.97438 * 21 20 5 23 23 C 1.38164 * 120.02639 * 255.00220 * 4 2 1 24 24 H 0.96704 * 114.00005 * 299.99900 * 1 2 3 25 25 H 1.09006 * 109.47457 * 240.00019 * 2 1 3 26 26 H 1.48496 * 110.00176 * 299.99979 * 3 2 1 27 27 H 1.48504 * 110.00071 * 61.31773 * 3 2 1 28 28 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 29 29 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 30 30 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 31 31 H 1.09000 * 109.47300 * 299.99482 * 11 10 8 32 32 H 1.08994 * 109.47756 * 59.99856 * 11 10 8 33 33 H 1.08994 * 109.47079 * 299.99171 * 12 11 10 34 34 H 1.09003 * 109.47336 * 60.00020 * 12 11 10 35 35 H 1.09001 * 113.61916 * 254.52816 * 15 13 12 36 36 H 1.08997 * 113.61516 * 25.42964 * 15 13 12 37 37 H 0.96705 * 114.00133 * 277.59389 * 18 16 15 38 38 H 1.09000 * 113.61467 * 334.56621 * 19 13 12 39 39 H 1.08998 * 113.61696 * 105.38739 * 19 13 12 40 40 H 1.07998 * 120.02758 * 179.97438 * 20 5 4 41 41 H 1.07995 * 119.97120 * 179.97438 * 21 20 5 42 42 H 1.07995 * 119.94278 * 180.27458 * 22 21 20 43 43 H 1.08005 * 119.97654 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8701 -2.0941 1.3067 6 8 1.3563 -2.8107 0.2727 7 6 1.3241 -4.2317 0.4208 8 6 0.7257 -4.8521 -0.8154 9 8 0.3621 -4.1469 -1.7326 10 7 0.5936 -6.1906 -0.9010 11 6 0.0124 -6.7938 -2.1030 12 6 -0.0222 -8.3152 -1.9443 13 6 -0.6298 -8.9451 -3.1992 14 1 -1.5305 -8.4322 -3.5368 15 6 0.3931 -9.1954 -4.3199 16 6 -0.3326 -10.5290 -4.5747 17 1 -1.1516 -10.4492 -5.2897 18 8 0.5479 -11.6180 -4.8588 19 6 -0.7883 -10.4720 -3.1071 20 6 2.3340 -2.7453 2.4408 21 6 2.8559 -2.0146 3.4904 22 6 2.9169 -0.6353 3.4114 23 6 2.4537 0.0159 2.2833 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2084 27 1 1.5878 2.4586 1.2242 28 1 2.3384 -4.6054 0.5608 29 1 0.7177 -4.4929 1.2880 30 1 0.8840 -6.7547 -0.1672 31 1 -1.0017 -6.4197 -2.2432 32 1 0.6190 -6.5331 -2.9701 33 1 0.9920 -8.6891 -1.8044 34 1 -0.6287 -8.5765 -1.0770 35 1 0.3157 -8.4901 -5.1473 36 1 1.4147 -9.3161 -3.9596 37 1 0.8380 -11.6592 -5.7804 38 1 -0.0903 -10.9424 -2.4146 39 1 -1.8180 -10.7957 -2.9554 40 1 2.2870 -3.8225 2.5027 41 1 3.2167 -2.5209 4.3734 42 1 3.3294 -0.0662 4.2313 43 1 2.5023 1.0932 2.2242 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_2989392.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:32 Heat of formation + Delta-G solvation = -103.493120 kcal Electronic energy + Delta-G solvation = -24572.635091 eV Core-core repulsion = 20778.590477 eV Total energy + Delta-G solvation = -3794.044613 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 2.72 seconds Orbital eigenvalues (eV) -41.62165 -40.74770 -40.24259 -38.57458 -37.62076 -36.83040 -35.66390 -32.80954 -32.11543 -31.08994 -29.22072 -26.72334 -26.69550 -25.54567 -23.49050 -22.62647 -22.62239 -21.64675 -20.44889 -19.52720 -18.54933 -18.32418 -18.01913 -17.56199 -17.12344 -16.91114 -16.52860 -16.51633 -16.02136 -15.87093 -15.60096 -15.36290 -15.11785 -15.03123 -14.82351 -14.20219 -14.17469 -13.73683 -13.48462 -13.40717 -13.32616 -13.05570 -12.71766 -12.54882 -12.47671 -12.12767 -11.99214 -11.88528 -11.69715 -11.67259 -11.20502 -11.04979 -10.67403 -10.54043 -10.25929 -9.97400 -9.21531 -4.95880 0.23883 0.42311 1.28317 1.40041 1.48261 1.53797 1.92971 2.58985 2.70429 3.29425 3.44771 3.49055 3.53429 3.61938 3.71910 3.78364 3.89168 3.96647 3.98785 4.02933 4.08861 4.13659 4.24345 4.32326 4.36822 4.37764 4.53918 4.59665 4.65752 4.68329 4.80359 4.83312 4.93524 4.98457 4.99564 5.10756 5.25362 5.28596 5.30107 5.38123 5.48038 5.53608 5.76403 6.26716 6.44169 6.52270 6.85864 7.08290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.084 4.084 3 Si 0.784 3.216 4 C -0.164 4.164 5 C 0.128 3.872 6 O -0.314 6.314 7 C 0.038 3.962 8 C 0.509 3.491 9 O -0.574 6.574 10 N -0.710 5.710 11 C 0.122 3.878 12 C -0.107 4.107 13 C -0.103 4.103 14 H 0.099 0.901 15 C -0.166 4.166 16 C 0.067 3.933 17 H 0.091 0.909 18 O -0.583 6.583 19 C -0.126 4.126 20 C -0.212 4.212 21 C -0.074 4.074 22 C -0.154 4.154 23 C -0.088 4.088 24 H 0.381 0.619 25 H 0.095 0.905 26 H -0.308 1.308 27 H -0.264 1.264 28 H 0.125 0.875 29 H 0.120 0.880 30 H 0.421 0.579 31 H 0.057 0.943 32 H 0.056 0.944 33 H 0.081 0.919 34 H 0.087 0.913 35 H 0.070 0.930 36 H 0.085 0.915 37 H 0.393 0.607 38 H 0.085 0.915 39 H 0.079 0.921 40 H 0.155 0.845 41 H 0.154 0.846 42 H 0.151 0.849 43 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.923 -3.992 5.693 7.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.191 4.191 3 Si 0.688 3.312 4 C -0.165 4.165 5 C 0.083 3.917 6 O -0.227 6.227 7 C -0.040 4.040 8 C 0.295 3.705 9 O -0.452 6.452 10 N -0.365 5.365 11 C -0.001 4.001 12 C -0.145 4.145 13 C -0.122 4.122 14 H 0.118 0.882 15 C -0.203 4.203 16 C 0.008 3.992 17 H 0.109 0.891 18 O -0.391 6.391 19 C -0.163 4.163 20 C -0.230 4.230 21 C -0.092 4.092 22 C -0.172 4.172 23 C -0.106 4.106 24 H 0.230 0.770 25 H 0.113 0.887 26 H -0.237 1.237 27 H -0.190 1.190 28 H 0.143 0.857 29 H 0.138 0.862 30 H 0.259 0.741 31 H 0.075 0.925 32 H 0.074 0.926 33 H 0.099 0.901 34 H 0.106 0.894 35 H 0.089 0.911 36 H 0.103 0.897 37 H 0.243 0.757 38 H 0.104 0.896 39 H 0.098 0.902 40 H 0.172 0.828 41 H 0.172 0.828 42 H 0.168 0.832 43 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.370 -3.059 4.928 6.708 hybrid contribution -1.088 -0.493 -0.163 1.205 sum 2.282 -3.552 4.765 6.366 Atomic orbital electron populations 1.86650 1.19008 1.80371 1.49672 1.25232 0.83249 1.12509 0.98146 0.94032 0.89830 0.70788 0.76591 1.19711 1.06784 0.91439 0.98611 1.19085 0.94150 0.91129 0.87369 1.86188 1.78006 1.18691 1.39780 1.22699 1.04512 0.79924 0.96882 1.20591 0.78498 0.83031 0.88365 1.90775 1.50303 1.62612 1.41509 1.45706 1.63710 1.05576 1.21499 1.21361 0.98139 0.93716 0.86898 1.21663 1.02645 0.91560 0.98595 1.22221 0.99313 0.95289 0.95334 0.88229 1.23781 0.99389 0.97808 0.99352 1.23530 0.92468 0.85618 0.97598 0.89147 1.86481 1.67048 1.50843 1.34735 1.23118 1.02219 0.95507 0.95481 1.21598 1.05587 1.01832 0.94019 1.21403 0.95435 0.94201 0.98188 1.21407 1.01980 0.95104 0.98703 1.21193 0.96454 1.00513 0.92409 0.77014 0.88662 1.23669 1.19002 0.85711 0.86189 0.74107 0.92472 0.92604 0.90084 0.89428 0.91083 0.89684 0.75723 0.89596 0.90237 0.82784 0.82834 0.83170 0.83618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -6.15 12.88 -148.98 -1.92 -8.06 16 2 C -0.08 -0.60 2.38 71.24 0.17 -0.43 16 3 Si 0.78 1.40 30.25 68.60 2.07 3.47 16 4 C -0.16 -0.79 5.27 -19.77 -0.10 -0.89 16 5 C 0.13 0.65 6.66 22.51 0.15 0.80 16 6 O -0.31 -2.75 9.00 -73.33 -0.66 -3.41 16 7 C 0.04 -0.03 5.22 71.24 0.37 0.35 16 8 C 0.51 2.69 7.91 87.66 0.69 3.38 16 9 O -0.57 -10.19 16.50 16.01 0.26 -9.92 16 10 N -0.71 1.85 5.56 -463.06 -2.57 -0.73 16 11 C 0.12 -0.12 5.67 86.38 0.49 0.37 16 12 C -0.11 0.64 5.15 30.60 0.16 0.80 16 13 C -0.10 0.42 3.64 -10.27 -0.04 0.38 16 14 H 0.10 -0.43 8.14 -2.38 -0.02 -0.45 16 15 C -0.17 0.40 7.48 31.18 0.23 0.63 16 16 C 0.07 -0.09 5.21 31.18 0.16 0.07 16 17 H 0.09 -0.32 8.14 -2.38 -0.02 -0.34 16 18 O -0.58 -0.90 13.68 -148.98 -2.04 -2.94 16 19 C -0.13 0.30 7.47 31.12 0.23 0.54 16 20 C -0.21 0.30 9.04 22.37 0.20 0.50 16 21 C -0.07 0.26 10.04 22.26 0.22 0.48 16 22 C -0.15 0.41 10.04 22.28 0.22 0.63 16 23 C -0.09 -0.01 8.66 22.25 0.19 0.19 16 24 H 0.38 1.37 8.70 -74.05 -0.64 0.72 16 25 H 0.10 1.01 7.83 -2.38 -0.02 0.99 16 26 H -0.31 -3.10 7.11 99.48 0.71 -2.40 16 27 H -0.26 -0.60 6.69 99.48 0.67 0.07 16 28 H 0.13 -0.94 7.66 -2.39 -0.02 -0.96 16 29 H 0.12 -0.80 7.66 -2.39 -0.02 -0.82 16 30 H 0.42 -4.45 8.47 -92.71 -0.79 -5.23 16 31 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 32 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 33 H 0.08 -0.56 7.88 -2.39 -0.02 -0.58 16 34 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 36 H 0.08 -0.11 7.92 -2.39 -0.02 -0.12 16 37 H 0.39 -2.41 9.12 -74.05 -0.68 -3.09 16 38 H 0.09 -0.10 8.10 -2.39 -0.02 -0.12 16 39 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 40 H 0.15 -1.17 6.30 -2.91 -0.02 -1.19 16 41 H 0.15 -1.35 8.06 -2.91 -0.02 -1.37 16 42 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 43 H 0.15 -0.46 4.86 -2.91 -0.01 -0.47 16 Total: 0.00 -28.73 359.09 -2.55 -31.28 By element: Atomic # 1 Polarization: -16.42 SS G_CDS: -1.06 Total: -17.48 kcal Atomic # 6 Polarization: 4.43 SS G_CDS: 3.36 Total: 7.79 kcal Atomic # 7 Polarization: 1.85 SS G_CDS: -2.57 Total: -0.73 kcal Atomic # 8 Polarization: -19.98 SS G_CDS: -4.35 Total: -24.33 kcal Atomic # 14 Polarization: 1.40 SS G_CDS: 2.07 Total: 3.47 kcal Total: -28.73 -2.55 -31.28 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_2989392.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.218 kcal (2) G-P(sol) polarization free energy of solvation -28.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.550 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.72 seconds