Wall clock time and date at job start Tue Mar 9 2021 13:18:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.57065 * 6 5 4 8 8 O 1.35895 * 120.05690 * 179.67938 * 7 6 5 9 9 C 1.42897 * 117.00208 * 0.02633 * 8 7 6 10 10 C 1.50699 * 109.47708 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99538 * 359.97438 * 10 9 8 12 12 N 1.34770 * 120.00519 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00191 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.46811 * 179.97438 * 13 12 10 15 15 C 1.53007 * 109.46957 * 179.97438 * 14 13 12 16 16 H 1.09001 * 112.84692 * 45.33201 * 15 14 13 17 17 C 1.53774 * 113.61449 * 176.52838 * 15 14 13 18 18 C 1.53780 * 87.08314 * 139.98035 * 17 15 14 19 19 H 1.09001 * 113.61502 * 89.10925 * 18 17 15 20 20 O 1.42896 * 113.61503 * 219.93586 * 18 17 15 21 21 C 1.53781 * 113.61185 * 274.13535 * 15 14 13 22 22 C 1.38735 * 119.89072 * 359.70511 * 7 6 5 23 23 C 1.38147 * 119.94145 * 359.97438 * 22 7 6 24 24 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 25 25 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 26 26 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 27 27 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 28 28 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 29 29 H 1.08003 * 120.02761 * 180.25084 * 6 5 4 30 30 H 1.09001 * 109.46870 * 299.99559 * 9 8 7 31 31 H 1.08995 * 109.47175 * 59.99163 * 9 8 7 32 32 H 0.97004 * 119.99891 * 359.97438 * 12 10 9 33 33 H 1.08996 * 109.46656 * 299.99090 * 13 12 10 34 34 H 1.08995 * 109.47599 * 59.99345 * 13 12 10 35 35 H 1.09001 * 109.47261 * 299.99512 * 14 13 12 36 36 H 1.08994 * 109.47775 * 59.99795 * 14 13 12 37 37 H 1.09005 * 113.61175 * 254.52610 * 17 15 14 38 38 H 1.08996 * 113.61784 * 25.34897 * 17 15 14 39 39 H 0.96704 * 113.99737 * 179.97438 * 20 18 17 40 40 H 1.09000 * 113.61697 * 334.56585 * 21 15 14 41 41 H 1.08999 * 113.61469 * 105.47038 * 21 15 14 42 42 H 1.07993 * 120.03312 * 179.97438 * 22 7 6 43 43 H 1.07997 * 119.97419 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8531 -2.0141 -3.4896 8 8 3.3053 -2.6544 -4.5997 9 6 4.1218 -1.8992 -5.4969 10 6 4.5253 -2.7674 -6.6607 11 8 4.1509 -3.9197 -6.7161 12 7 5.3030 -2.2638 -7.6394 13 6 5.6957 -3.1080 -8.7705 14 6 6.5699 -2.2993 -9.7311 15 6 6.9805 -3.1811 -10.9121 16 1 6.1499 -3.7584 -11.3182 17 6 7.7950 -2.4365 -11.9830 18 6 8.6613 -3.7024 -12.0921 19 1 8.2910 -4.4234 -12.8209 20 8 10.0563 -3.4304 -12.2399 21 6 8.2415 -4.0200 -10.6453 22 6 2.0554 -2.6873 -2.5757 23 6 1.5970 -2.0342 -1.4480 24 1 -0.3934 0.4417 -0.7650 25 1 1.7923 -0.5138 0.8900 26 1 1.5614 2.4679 1.2086 27 1 3.5344 1.7704 -0.0321 28 1 2.9775 0.9999 -1.9728 29 1 3.8084 -0.1597 -3.9789 30 1 3.5603 -1.0396 -5.8630 31 1 5.0137 -1.5545 -4.9738 32 1 5.6028 -1.3423 -7.5950 33 1 6.2569 -3.9677 -8.4045 34 1 4.8038 -3.4524 -9.2938 35 1 6.0084 -1.4397 -10.0971 36 1 7.4618 -1.9546 -9.2081 37 1 7.2282 -2.2160 -12.8877 38 1 8.3326 -1.5698 -11.5985 39 1 10.6064 -4.2228 -12.3086 40 1 8.9026 -3.5878 -9.8940 41 1 8.0348 -5.0759 -10.4715 42 1 1.7931 -3.7210 -2.7457 43 1 0.9757 -2.5576 -0.7365 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:42 Heat of formation + Delta-G solvation = -102.430548 kcal Electronic energy + Delta-G solvation = -23928.312780 eV Core-core repulsion = 20134.314243 eV Total energy + Delta-G solvation = -3793.998537 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 1.86 seconds Orbital eigenvalues (eV) -41.55660 -40.75476 -40.28961 -39.00143 -37.17374 -36.81649 -35.65424 -32.59113 -31.99547 -31.67473 -29.47413 -26.84688 -26.33150 -25.52609 -23.95758 -22.77053 -22.39467 -21.65577 -20.57811 -19.53313 -18.61744 -18.40261 -18.06488 -17.57269 -17.09910 -16.84356 -16.59551 -16.39959 -16.09140 -15.90725 -15.61135 -15.43332 -15.16629 -14.86392 -14.68319 -14.28345 -14.22158 -13.77224 -13.57219 -13.52599 -13.49084 -13.40591 -12.81621 -12.59109 -12.23539 -12.13438 -12.11214 -12.06371 -11.81744 -11.74017 -11.33080 -10.96409 -10.75619 -10.43362 -10.24293 -10.06365 -9.22773 -5.07067 0.27354 0.28322 1.28302 1.41147 1.46080 1.59663 1.95201 2.51613 2.64749 3.14476 3.34757 3.42409 3.46837 3.47883 3.64466 3.66233 3.71469 3.83909 3.85136 3.85472 3.86382 3.95815 4.13217 4.21582 4.24916 4.42582 4.43134 4.49585 4.54941 4.62932 4.69566 4.70897 4.80458 4.86264 4.93425 4.96598 5.11382 5.13182 5.22850 5.23990 5.32826 5.48961 5.66453 6.19172 6.33783 6.57751 6.64250 7.05217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.063 4.063 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.076 4.076 6 C -0.206 4.206 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.512 6.512 12 N -0.729 5.729 13 C 0.121 3.879 14 C -0.119 4.119 15 C -0.107 4.107 16 H 0.097 0.903 17 C -0.124 4.124 18 C 0.073 3.927 19 H 0.082 0.918 20 O -0.561 6.561 21 C -0.167 4.167 22 C -0.145 4.145 23 C -0.051 4.051 24 H 0.379 0.621 25 H 0.113 0.887 26 H -0.255 1.255 27 H -0.259 1.259 28 H 0.130 0.870 29 H 0.132 0.868 30 H 0.096 0.904 31 H 0.095 0.905 32 H 0.403 0.597 33 H 0.071 0.929 34 H 0.071 0.929 35 H 0.074 0.926 36 H 0.073 0.927 37 H 0.075 0.925 38 H 0.091 0.909 39 H 0.379 0.621 40 H 0.090 0.910 41 H 0.071 0.929 42 H 0.136 0.864 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.620 4.173 -3.764 5.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.093 4.093 6 C -0.225 4.225 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.299 3.701 11 O -0.386 6.386 12 N -0.383 5.383 13 C -0.002 4.002 14 C -0.157 4.157 15 C -0.126 4.126 16 H 0.116 0.884 17 C -0.162 4.162 18 C 0.014 3.986 19 H 0.100 0.900 20 O -0.367 6.367 21 C -0.205 4.205 22 C -0.164 4.164 23 C -0.069 4.069 24 H 0.226 0.774 25 H 0.130 0.870 26 H -0.180 1.180 27 H -0.184 1.184 28 H 0.147 0.853 29 H 0.150 0.850 30 H 0.114 0.886 31 H 0.113 0.887 32 H 0.237 0.763 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.093 0.907 36 H 0.092 0.908 37 H 0.094 0.906 38 H 0.110 0.890 39 H 0.227 0.773 40 H 0.109 0.891 41 H 0.090 0.910 42 H 0.154 0.846 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.668 4.010 -2.857 5.199 hybrid contribution 0.595 -0.560 0.072 0.820 sum 2.262 3.450 -2.785 4.978 Atomic orbital electron populations 1.86500 1.17183 1.81693 1.49264 1.24977 0.85179 1.09872 0.97415 0.94816 0.80820 0.78195 0.87253 1.20258 1.01895 0.95597 0.98050 1.20787 0.96273 0.99033 0.93256 1.21171 1.06219 0.94206 1.00907 1.19079 0.94282 0.91093 0.86717 1.86173 1.64280 1.38664 1.30935 1.22471 0.96406 0.94555 0.90436 1.20031 0.78862 0.88090 0.83132 1.90793 1.53090 1.17626 1.77113 1.45826 1.52890 1.16261 1.23330 1.21415 0.98994 0.93737 0.86061 1.21750 0.99927 0.98548 0.95451 1.22241 0.96988 0.97662 0.95707 0.88444 1.23113 0.96541 0.97435 0.99085 1.23377 0.81586 0.98026 0.95568 0.90010 1.86528 1.17575 1.36458 1.96108 1.23823 0.97464 1.00721 0.98482 1.20541 1.00397 1.01283 0.94167 1.20858 0.96778 0.93426 0.95835 0.77381 0.86970 1.17995 1.18393 0.85315 0.85049 0.88625 0.88735 0.76313 0.91064 0.91069 0.90694 0.90813 0.90632 0.89022 0.77316 0.89127 0.91049 0.84631 0.84740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.14 12.77 -35.23 -0.45 -0.59 16 2 C -0.06 0.01 2.82 36.01 0.10 0.12 16 3 Si 0.69 -0.86 29.78 -169.99 -5.06 -5.92 16 4 C -0.16 -0.03 5.39 -104.60 -0.56 -0.59 16 5 C -0.08 0.05 8.66 -39.60 -0.34 -0.29 16 6 C -0.21 0.10 9.04 -39.43 -0.36 -0.25 16 7 C 0.13 0.22 6.69 -39.22 -0.26 -0.05 16 8 O -0.29 -0.78 9.67 -39.32 -0.38 -1.16 16 9 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 10 C 0.51 0.64 7.91 -10.99 -0.09 0.56 16 11 O -0.51 -3.31 16.50 -14.35 -0.24 -3.55 16 12 N -0.73 1.47 5.56 -60.30 -0.33 1.13 16 13 C 0.12 -0.18 5.67 -4.04 -0.02 -0.21 16 14 C -0.12 0.39 5.15 -26.73 -0.14 0.26 16 15 C -0.11 0.27 3.64 -89.81 -0.33 -0.06 16 16 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 17 C -0.12 0.19 7.47 -25.92 -0.19 -0.01 16 18 C 0.07 -0.08 5.21 -25.83 -0.13 -0.21 16 19 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 20 O -0.56 -0.22 13.68 -35.23 -0.48 -0.71 16 21 C -0.17 0.30 7.48 -25.83 -0.19 0.10 16 22 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 23 C -0.05 -0.05 9.60 -39.60 -0.38 -0.43 16 24 H 0.38 -1.35 8.70 45.56 0.40 -0.96 16 25 H 0.11 0.03 7.96 -51.93 -0.41 -0.39 16 26 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 27 H -0.26 -0.25 7.11 56.52 0.40 0.16 16 28 H 0.13 -0.35 4.87 -52.48 -0.26 -0.61 16 29 H 0.13 -0.43 6.30 -52.48 -0.33 -0.76 16 30 H 0.10 -0.38 7.66 -51.93 -0.40 -0.77 16 31 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 32 H 0.40 -2.14 8.47 -40.82 -0.35 -2.48 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 36 H 0.07 -0.25 7.87 -51.93 -0.41 -0.66 16 37 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 39 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 40 H 0.09 -0.10 7.92 -51.93 -0.41 -0.52 16 41 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.14 0.18 8.06 -52.49 -0.42 -0.25 16 43 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 359.85 15.07 5.42 5.42 Total: 0.00 -10.69 359.85 -10.20 -20.89 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -5.57 Total: -13.95 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -3.11 Total: -1.56 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.33 Total: 1.13 kcal Atomic # 8 Polarization: -4.46 SS G_CDS: -1.55 Total: -6.01 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.92 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.69 -10.20 -20.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.537 kcal (2) G-P(sol) polarization free energy of solvation -10.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.894 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.86 seconds