Wall clock time and date at job start Tue Mar 9 2021 13:18:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.47172 * 2 1 4 4 C 1.50698 * 109.47370 * 120.00064 * 2 1 3 5 5 C 1.38267 * 119.94362 * 64.99884 * 4 2 1 6 6 C 1.38144 * 120.05822 * 180.02562 * 5 4 2 7 7 C 1.38732 * 119.94007 * 359.97438 * 6 5 4 8 8 O 1.35907 * 120.05805 * 180.02562 * 7 6 5 9 9 C 1.42889 * 117.00462 * 179.97438 * 8 7 6 10 10 C 1.53000 * 109.47293 * 179.97438 * 9 8 7 11 11 C 1.50699 * 109.47119 * 179.97438 * 10 9 8 12 12 O 1.21289 * 120.00259 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99950 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00085 * 179.97438 * 13 11 10 15 15 C 1.53000 * 109.47255 * 180.02562 * 14 13 11 16 16 C 1.53004 * 109.47363 * 180.02562 * 15 14 13 17 17 H 1.09000 * 112.84659 * 316.19687 * 16 15 14 18 18 C 1.53955 * 113.74341 * 87.39980 * 16 15 14 19 19 C 1.53776 * 87.01439 * 139.94575 * 18 16 15 20 20 H 1.09004 * 113.61446 * 89.23291 * 19 18 16 21 21 O 1.42903 * 113.61520 * 220.04549 * 19 18 16 22 22 C 1.53778 * 113.61391 * 185.00303 * 16 15 14 23 23 C 1.38732 * 119.88926 * 0.27712 * 7 6 5 24 24 C 1.38141 * 119.94458 * 359.47407 * 23 7 6 25 25 H 0.96698 * 113.99551 * 300.00250 * 1 2 3 26 26 H 1.09001 * 109.46692 * 239.99985 * 2 1 3 27 27 H 1.48498 * 109.99732 * 178.68574 * 3 2 1 28 28 H 1.48508 * 109.99923 * 300.00265 * 3 2 1 29 29 H 1.08000 * 119.97177 * 359.97267 * 5 4 2 30 30 H 1.07997 * 120.03433 * 179.97438 * 6 5 4 31 31 H 1.09002 * 109.47407 * 60.00025 * 9 8 7 32 32 H 1.09000 * 109.47427 * 300.00112 * 9 8 7 33 33 H 1.09006 * 109.46936 * 60.00257 * 10 9 8 34 34 H 1.08996 * 109.47483 * 299.99821 * 10 9 8 35 35 H 0.96999 * 120.00078 * 0.02562 * 13 11 10 36 36 H 1.09006 * 109.46577 * 60.00679 * 14 13 11 37 37 H 1.08994 * 109.47497 * 300.01036 * 14 13 11 38 38 H 1.09002 * 109.46706 * 60.00244 * 15 14 13 39 39 H 1.09002 * 109.47075 * 300.00394 * 15 14 13 40 40 H 1.08999 * 113.60951 * 25.43006 * 18 16 15 41 41 H 1.08998 * 113.66695 * 254.47177 * 18 16 15 42 42 H 0.96700 * 114.00311 * 279.14305 * 21 19 18 43 43 H 1.09004 * 113.61269 * 105.38679 * 22 16 15 44 44 H 1.09002 * 113.61517 * 334.47767 * 22 16 15 45 45 H 1.08006 * 120.02729 * 179.72381 * 23 7 6 46 46 H 1.07997 * 119.97538 * 180.23328 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0605 1.3972 6 6 2.1431 -2.7140 2.5244 7 6 2.8532 -2.0145 3.4893 8 8 3.3063 -2.6551 4.5990 9 6 4.0303 -1.8721 5.5500 10 6 4.4555 -2.7584 6.7224 11 6 5.2197 -1.9327 7.7251 12 8 5.4055 -0.7514 7.5222 13 7 5.6957 -2.5066 8.8478 14 6 6.4391 -1.7041 9.8222 15 6 6.8641 -2.5904 10.9947 16 6 7.6399 -1.7521 12.0128 17 1 8.3648 -1.0846 11.5468 18 6 6.7444 -1.0566 13.0542 19 6 7.8185 -1.4109 14.0960 20 1 8.5927 -0.6508 14.2008 21 8 7.2813 -1.8325 15.3514 22 6 8.2192 -2.5755 13.1752 23 6 3.0955 -0.6587 3.3222 24 6 2.6388 -0.0110 2.1907 25 1 -0.3932 0.4417 0.7650 26 1 1.7923 -0.5139 -0.8900 27 1 3.5346 1.7702 0.0320 28 1 1.5615 2.4679 -1.2085 29 1 1.1309 -2.6045 0.6459 30 1 1.9493 -3.7684 2.6545 31 1 3.3946 -1.0660 5.9163 32 1 4.9152 -1.4492 5.0742 33 1 5.0912 -3.5647 6.3565 34 1 3.5705 -3.1808 7.1982 35 1 5.5468 -3.4512 9.0103 36 1 5.8042 -0.8970 10.1880 37 1 7.3243 -1.2826 9.3461 38 1 7.4990 -3.3972 10.6286 39 1 5.9790 -3.0121 11.4709 40 1 5.7929 -1.5621 13.2188 41 1 6.6327 0.0150 12.8893 42 1 7.0058 -1.1049 15.9256 43 1 9.2964 -2.7283 13.1078 44 1 7.6715 -3.4970 13.3730 45 1 3.6442 -0.1110 4.0741 46 1 2.8304 1.0435 2.0582 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:45 Heat of formation + Delta-G solvation = -112.980585 kcal Electronic energy + Delta-G solvation = -25506.540507 eV Core-core repulsion = 21556.546868 eV Total energy + Delta-G solvation = -3949.993640 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 3.95 seconds Orbital eigenvalues (eV) -41.37025 -40.86512 -40.35716 -39.11843 -37.16413 -36.87687 -35.65592 -33.52740 -32.12827 -31.69720 -31.12515 -26.95820 -26.77173 -26.02436 -24.91923 -23.40220 -22.71921 -22.16696 -21.45213 -20.57037 -19.49935 -18.51987 -18.28224 -17.67255 -17.55347 -17.29954 -16.85652 -16.64633 -16.43160 -16.25471 -15.89211 -15.57560 -15.49808 -15.42784 -14.68006 -14.63777 -14.45166 -14.35561 -14.17806 -13.87313 -13.53030 -13.51708 -13.43244 -12.96431 -12.87493 -12.76133 -12.55439 -12.12518 -12.07550 -12.01014 -11.80970 -11.78675 -11.65898 -11.32994 -11.04315 -10.76971 -10.37860 -10.21358 -9.99331 -9.15636 -5.00693 0.33962 0.36080 1.33674 1.50465 1.66466 1.67398 2.00468 2.44153 2.71368 3.14717 3.35743 3.46115 3.48571 3.52495 3.64795 3.72119 3.79894 3.81653 3.85022 3.85691 3.96040 4.00398 4.14020 4.22094 4.26733 4.31739 4.40048 4.43093 4.53535 4.55528 4.57017 4.62593 4.69364 4.70491 4.76028 4.81008 4.87111 4.97149 4.99888 5.11015 5.22376 5.27765 5.32944 5.33253 5.54248 5.75407 6.30020 6.38464 6.61651 6.64131 7.06267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.159 4.159 5 C -0.053 4.053 6 C -0.151 4.151 7 C 0.137 3.863 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.519 3.481 12 O -0.539 6.539 13 N -0.730 5.730 14 C 0.119 3.881 15 C -0.119 4.119 16 C -0.107 4.107 17 H 0.097 0.903 18 C -0.167 4.167 19 C 0.073 3.927 20 H 0.082 0.918 21 O -0.561 6.561 22 C -0.125 4.125 23 C -0.203 4.203 24 C -0.074 4.074 25 H 0.379 0.621 26 H 0.112 0.888 27 H -0.258 1.258 28 H -0.255 1.255 29 H 0.133 0.867 30 H 0.133 0.867 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.107 0.893 34 H 0.108 0.892 35 H 0.403 0.597 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.074 0.926 39 H 0.073 0.927 40 H 0.090 0.910 41 H 0.071 0.929 42 H 0.379 0.621 43 H 0.075 0.925 44 H 0.091 0.909 45 H 0.135 0.865 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.644 -0.683 4.402 4.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.160 4.160 5 C -0.071 4.071 6 C -0.169 4.169 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.305 3.695 12 O -0.415 6.415 13 N -0.382 5.382 14 C -0.004 4.004 15 C -0.157 4.157 16 C -0.126 4.126 17 H 0.115 0.885 18 C -0.205 4.205 19 C 0.015 3.985 20 H 0.100 0.900 21 O -0.367 6.367 22 C -0.162 4.162 23 C -0.221 4.221 24 C -0.092 4.092 25 H 0.226 0.774 26 H 0.129 0.871 27 H -0.183 1.183 28 H -0.180 1.180 29 H 0.151 0.849 30 H 0.151 0.849 31 H 0.092 0.908 32 H 0.091 0.909 33 H 0.125 0.875 34 H 0.126 0.874 35 H 0.238 0.762 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.093 0.907 39 H 0.092 0.908 40 H 0.109 0.891 41 H 0.089 0.911 42 H 0.227 0.773 43 H 0.094 0.906 44 H 0.110 0.890 45 H 0.152 0.848 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 1.478 -0.318 3.096 3.445 hybrid contribution 0.091 -0.330 0.272 0.437 sum 1.569 -0.648 3.368 3.771 Atomic orbital electron populations 1.86499 1.17228 1.81704 1.49244 1.24956 0.85125 1.09838 0.97402 0.94807 0.81121 0.78327 0.87230 1.20232 1.02701 0.95217 0.97805 1.20831 0.96548 0.93472 0.96272 1.20504 1.01773 1.00828 0.93821 1.18992 0.94109 0.90939 0.86749 1.85975 1.69085 1.38555 1.29381 1.22426 0.96393 0.93323 0.88042 1.21470 1.02227 0.99612 0.94850 1.20294 0.79109 0.87995 0.82069 1.90758 1.58045 1.16096 1.76645 1.45977 1.57135 1.13765 1.21331 1.21407 0.96317 0.94197 0.88527 1.21749 1.00601 0.98283 0.95083 1.22272 0.98396 0.98129 0.93794 0.88503 1.23826 0.98977 1.01251 0.96434 1.23348 0.95303 0.97376 0.82522 0.90029 1.86529 1.83728 1.37366 1.29079 1.23116 1.01558 0.98043 0.93479 1.21273 1.06341 0.93900 1.00620 1.20781 0.96390 0.99001 0.93016 0.77409 0.87059 1.18322 1.17971 0.84948 0.84868 0.90805 0.90899 0.87463 0.87414 0.76215 0.91168 0.91235 0.90747 0.90825 0.89111 0.91067 0.77321 0.90631 0.89007 0.84765 0.85376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.43 12.83 -35.23 -0.45 -0.89 16 2 C -0.06 -0.03 2.80 36.00 0.10 0.07 16 3 Si 0.68 -0.23 29.80 -169.99 -5.07 -5.29 16 4 C -0.16 -0.15 5.35 -104.60 -0.56 -0.71 16 5 C -0.05 -0.06 9.68 -39.61 -0.38 -0.45 16 6 C -0.15 -0.22 9.99 -39.43 -0.39 -0.62 16 7 C 0.14 0.26 6.69 -39.22 -0.26 0.00 16 8 O -0.32 -0.49 10.14 -19.45 -0.20 -0.68 16 9 C 0.07 0.01 4.03 37.16 0.15 0.16 16 10 C -0.14 0.28 6.07 -27.88 -0.17 0.11 16 11 C 0.52 0.10 7.83 -10.99 -0.09 0.01 16 12 O -0.54 -2.29 15.98 5.55 0.09 -2.20 16 13 N -0.73 1.51 5.56 -60.29 -0.33 1.17 16 14 C 0.12 -0.19 5.67 -4.04 -0.02 -0.22 16 15 C -0.12 0.37 5.17 -26.73 -0.14 0.24 16 16 C -0.11 0.26 3.65 -89.72 -0.33 -0.06 16 17 H 0.10 -0.27 8.13 -51.93 -0.42 -0.69 16 18 C -0.17 0.31 7.48 -25.83 -0.19 0.11 16 19 C 0.07 -0.08 5.21 -25.92 -0.13 -0.21 16 20 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 21 O -0.56 -0.23 13.67 -35.23 -0.48 -0.72 16 22 C -0.12 0.17 7.47 -25.92 -0.19 -0.02 16 23 C -0.20 -0.24 9.04 -39.43 -0.36 -0.59 16 24 C -0.07 -0.04 8.66 -39.61 -0.34 -0.39 16 25 H 0.38 -1.13 8.70 45.56 0.40 -0.73 16 26 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 27 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 28 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 29 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 30 H 0.13 0.04 8.06 -52.49 -0.42 -0.39 16 31 H 0.07 0.02 7.61 -51.93 -0.40 -0.37 16 32 H 0.07 0.04 7.63 -51.93 -0.40 -0.36 16 33 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 35 H 0.40 -1.92 8.47 -40.82 -0.35 -2.26 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 39 H 0.07 -0.23 7.86 -51.93 -0.41 -0.64 16 40 H 0.09 -0.11 7.91 -51.93 -0.41 -0.52 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.38 -1.32 9.12 45.56 0.42 -0.91 16 43 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 44 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 45 H 0.13 0.01 6.30 -52.48 -0.33 -0.32 16 46 H 0.13 -0.18 4.90 -52.49 -0.26 -0.43 16 LS Contribution 380.90 15.07 5.74 5.74 Total: 0.00 -9.21 380.90 -10.43 -19.64 By element: Atomic # 1 Polarization: -7.79 SS G_CDS: -6.41 Total: -14.21 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -3.31 Total: -2.56 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: -0.33 Total: 1.17 kcal Atomic # 8 Polarization: -3.45 SS G_CDS: -1.04 Total: -4.49 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.07 Total: -5.29 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -9.21 -10.43 -19.64 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.342 kcal (2) G-P(sol) polarization free energy of solvation -9.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.639 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.95 seconds