Wall clock time and date at job start Tue Mar 9 2021 13:19:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35996 * 117.00041 * 2 1 4 4 C 1.39151 * 120.07217 * 179.97438 * 3 2 1 5 5 O 1.35995 * 120.07763 * 0.02562 * 4 3 2 6 6 C 1.42891 * 117.00188 * 179.72322 * 5 4 3 7 7 C 1.50706 * 109.47345 * 180.02562 * 6 5 4 8 8 O 1.21280 * 119.99401 * 359.97438 * 7 6 5 9 9 N 1.34770 * 120.00125 * 180.02562 * 7 6 5 10 10 C 1.46497 * 119.99944 * 179.97438 * 9 7 6 11 11 C 1.52995 * 109.47428 * 179.97438 * 10 9 7 12 12 C 1.53001 * 109.47598 * 179.97438 * 11 10 9 13 13 H 1.09003 * 112.84627 * 43.80209 * 12 11 10 14 14 C 1.53781 * 113.61564 * 174.99791 * 12 11 10 15 15 C 1.53781 * 87.07950 * 139.98729 * 14 12 11 16 16 H 1.09001 * 113.61962 * 89.19828 * 15 14 12 17 17 O 1.42907 * 113.61099 * 220.01915 * 15 14 12 18 18 C 1.53778 * 113.61730 * 272.49985 * 12 11 10 19 19 C 1.38570 * 119.85250 * 179.72809 * 4 3 2 20 20 C 1.38247 * 119.99930 * 0.25054 * 19 4 3 21 21 N 1.48001 * 119.92891 * 179.97438 * 20 19 4 22 22 O 1.21806 * 119.99922 * 0.02562 * 21 20 19 23 23 O 1.21803 * 120.00235 * 180.02562 * 21 20 19 24 24 C 1.38255 * 120.14346 * 0.02562 * 20 19 4 25 25 C 1.50701 * 119.92495 * 179.97438 * 24 20 19 26 26 O 1.42902 * 109.47213 * 74.99600 * 25 24 20 27 27 Si 1.86298 * 109.47114 * 194.99764 * 25 24 20 28 28 C 1.38246 * 120.14839 * 0.02562 * 24 20 19 29 29 H 1.09000 * 109.47497 * 300.00088 * 1 2 3 30 30 H 1.08993 * 109.47259 * 60.00814 * 1 2 3 31 31 H 1.09006 * 109.47100 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.47220 * 299.99841 * 6 5 4 33 33 H 1.08996 * 109.47672 * 59.99785 * 6 5 4 34 34 H 0.97000 * 120.00241 * 359.97438 * 9 7 6 35 35 H 1.09005 * 109.47413 * 299.99857 * 10 9 7 36 36 H 1.08999 * 109.47516 * 59.99322 * 10 9 7 37 37 H 1.09002 * 109.47078 * 299.99902 * 11 10 9 38 38 H 1.09004 * 109.47393 * 59.99963 * 11 10 9 39 39 H 1.09004 * 113.61245 * 254.53035 * 14 12 11 40 40 H 1.08997 * 113.61461 * 25.34859 * 14 12 11 41 41 H 0.96700 * 113.99763 * 179.97438 * 17 15 14 42 42 H 1.09001 * 113.60906 * 334.56408 * 18 12 11 43 43 H 1.08993 * 113.61683 * 105.46548 * 18 12 11 44 44 H 1.08001 * 120.00237 * 180.23265 * 19 4 3 45 45 H 1.08999 * 109.47099 * 314.99991 * 25 24 20 46 46 H 0.96700 * 113.99976 * 179.97438 * 26 25 24 47 47 H 1.48499 * 110.00212 * 300.00025 * 27 25 24 48 48 H 1.48497 * 110.00230 * 61.31766 * 27 25 24 49 49 H 1.07993 * 119.99877 * 179.97438 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6002 0.3007 -0.0050 7 6 6.2519 -1.0582 -0.0048 8 8 5.5670 -2.0591 0.0002 9 7 7.5957 -1.1611 -0.0091 10 6 8.2291 -2.4821 -0.0083 11 6 9.7502 -2.3183 -0.0144 12 6 10.4118 -3.6979 -0.0129 13 1 9.9386 -4.3949 -0.7045 14 6 11.9434 -3.6467 -0.1416 15 6 11.9896 -4.7840 0.8925 16 1 11.9492 -5.7791 0.4495 17 8 13.0417 -4.6449 1.8496 18 6 10.6280 -4.2759 1.3956 19 6 4.0603 2.5233 -0.0052 20 6 3.3029 3.6799 -0.0061 21 7 3.9714 5.0003 -0.0117 22 8 5.1876 5.0672 -0.0158 23 8 3.3054 6.0201 -0.0121 24 6 1.9223 3.6057 -0.0009 25 6 1.1015 4.8696 -0.0014 26 8 1.1298 5.4555 -1.3045 27 14 -0.6579 4.4676 0.4607 28 6 1.2932 2.3747 0.0059 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 5.9032 0.8483 -0.8975 33 1 5.9098 0.8526 0.8824 34 1 8.1434 -0.3606 -0.0127 35 1 7.9259 -3.0299 0.8840 36 1 7.9199 -3.0339 -0.8959 37 1 10.0531 -1.7707 -0.9069 38 1 10.0599 -1.7664 0.8731 39 1 12.3087 -3.9373 -1.1266 40 1 12.3805 -2.7136 0.2137 41 1 13.0756 -5.3570 2.5030 42 1 10.7057 -3.5153 2.1725 43 1 9.9316 -5.0743 1.6516 44 1 5.1386 2.5840 -0.0086 45 1 1.5157 5.5721 0.7218 46 1 0.6208 6.2743 -1.3787 47 1 -1.2341 3.5106 -0.5178 48 1 -0.7044 3.8870 1.8266 49 1 0.2146 2.3196 0.0104 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:19 Heat of formation + Delta-G solvation = -121.345254 kcal Electronic energy + Delta-G solvation = -35103.993076 eV Core-core repulsion = 30003.938089 eV Total energy + Delta-G solvation = -5100.054986 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.24568 -42.12257 -41.06689 -40.47402 -39.66480 -39.10261 -37.61067 -37.08367 -36.85355 -35.68046 -32.86112 -32.68014 -32.01145 -29.74560 -29.00213 -27.86585 -26.84117 -26.03181 -25.37296 -23.90186 -23.07867 -22.75517 -21.82649 -20.70846 -20.56914 -19.71606 -19.51906 -18.77854 -18.73472 -18.41352 -18.19543 -18.09060 -17.86705 -17.64240 -17.08891 -16.94077 -16.57765 -16.52742 -16.22975 -15.96373 -15.49839 -15.45332 -15.26218 -15.06057 -14.72481 -14.38624 -14.25154 -14.10680 -13.91206 -13.57263 -13.51607 -13.44280 -13.10311 -12.85020 -12.71003 -12.63879 -12.52701 -12.48422 -12.39159 -12.25037 -12.12828 -11.95980 -11.85299 -11.81083 -11.33220 -11.04076 -10.76955 -10.57139 -10.28703 -10.28099 -9.53794 -5.19542 -1.21676 -0.51460 0.32023 0.42174 1.02051 1.13947 1.38702 1.40836 1.66538 1.69477 1.85468 2.23935 2.82238 3.04413 3.14496 3.22110 3.34053 3.36367 3.42693 3.47487 3.62446 3.64302 3.64811 3.69262 3.78375 3.84538 3.84986 3.89250 3.93159 3.94668 4.12118 4.14863 4.21163 4.22690 4.34201 4.42544 4.54072 4.58031 4.65545 4.69613 4.70693 4.80317 4.85608 4.96061 5.11195 5.18767 5.32893 5.42558 5.46624 5.90327 6.22696 6.54012 6.64601 6.79197 6.98663 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.283 6.283 3 C 0.170 3.830 4 C 0.110 3.890 5 O -0.264 6.264 6 C 0.031 3.969 7 C 0.517 3.483 8 O -0.509 6.509 9 N -0.727 5.727 10 C 0.121 3.879 11 C -0.120 4.120 12 C -0.107 4.107 13 H 0.097 0.903 14 C -0.124 4.124 15 C 0.074 3.926 16 H 0.082 0.918 17 O -0.561 6.561 18 C -0.167 4.167 19 C -0.117 4.117 20 C -0.024 4.024 21 N 0.036 4.964 22 O -0.174 6.174 23 O -0.132 6.132 24 C 0.006 3.994 25 C -0.082 4.082 26 O -0.534 6.534 27 Si 0.688 3.312 28 C -0.186 4.186 29 H 0.061 0.939 30 H 0.063 0.937 31 H 0.117 0.883 32 H 0.101 0.899 33 H 0.100 0.900 34 H 0.404 0.596 35 H 0.072 0.928 36 H 0.071 0.929 37 H 0.075 0.925 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.092 0.908 41 H 0.379 0.621 42 H 0.091 0.909 43 H 0.070 0.930 44 H 0.169 0.831 45 H 0.102 0.898 46 H 0.390 0.610 47 H -0.248 1.248 48 H -0.250 1.250 49 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.942 0.038 0.942 2.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.194 6.194 3 C 0.122 3.878 4 C 0.063 3.937 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.301 3.699 8 O -0.383 6.383 9 N -0.381 5.381 10 C -0.002 4.002 11 C -0.157 4.157 12 C -0.126 4.126 13 H 0.116 0.884 14 C -0.162 4.162 15 C 0.014 3.986 16 H 0.100 0.900 17 O -0.367 6.367 18 C -0.205 4.205 19 C -0.137 4.137 20 C -0.108 4.108 21 N 0.555 4.445 22 O -0.385 6.385 23 O -0.352 6.352 24 C 0.004 3.996 25 C -0.193 4.193 26 O -0.341 6.341 27 Si 0.588 3.412 28 C -0.205 4.205 29 H 0.079 0.921 30 H 0.082 0.918 31 H 0.135 0.865 32 H 0.118 0.882 33 H 0.118 0.882 34 H 0.238 0.762 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.094 0.906 38 H 0.093 0.907 39 H 0.094 0.906 40 H 0.110 0.890 41 H 0.227 0.773 42 H 0.109 0.891 43 H 0.089 0.911 44 H 0.186 0.814 45 H 0.119 0.881 46 H 0.239 0.761 47 H -0.172 1.172 48 H -0.174 1.174 49 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -2.794 -2.409 0.712 3.758 hybrid contribution 0.825 0.403 0.286 0.962 sum -1.969 -2.006 0.997 2.983 Atomic orbital electron populations 1.23381 0.76982 1.05733 1.01850 1.86335 1.22297 1.24228 1.86578 1.18404 0.89119 0.85735 0.94539 1.17812 0.88268 0.85419 1.02235 1.86332 1.16909 1.25955 1.88423 1.22674 0.80154 0.97292 1.04660 1.19825 0.82615 0.90137 0.77301 1.90809 1.62635 1.37871 1.46946 1.45811 1.05778 1.10250 1.76300 1.21434 0.92106 0.83635 1.02991 1.21757 0.93200 0.97481 1.03291 1.22241 0.95597 0.96708 0.98058 0.88444 1.23121 0.95064 0.99313 0.98694 1.23347 0.86313 0.98350 0.90540 0.89992 1.86532 1.53253 1.52172 1.44709 1.23797 0.97950 1.01558 0.97161 1.20799 1.02218 0.88866 1.01782 1.20367 0.91809 0.83289 1.15358 1.43255 1.00942 1.02453 0.97811 1.94546 0.95686 1.93688 1.54533 1.94495 1.64686 1.24147 1.51907 1.18947 0.90705 0.95055 0.94869 1.24875 1.09135 0.94030 0.91237 1.86436 1.76731 1.44169 1.26776 0.94608 0.79013 0.87581 0.79997 1.20934 1.00730 0.90027 1.08816 0.92062 0.91809 0.86526 0.88161 0.88178 0.76167 0.90997 0.91024 0.90639 0.90738 0.90630 0.88985 0.77329 0.89093 0.91087 0.81416 0.88083 0.76149 1.17247 1.17395 0.82577 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.70 10.28 -34.23 -0.35 -1.05 16 3 C 0.17 0.39 6.70 -39.12 -0.26 0.13 16 4 C 0.11 0.23 6.70 -39.12 -0.26 -0.03 16 5 O -0.26 -0.76 9.45 -47.35 -0.45 -1.21 16 6 C 0.03 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.70 7.91 -10.99 -0.09 0.61 16 8 O -0.51 -3.27 16.50 -14.35 -0.24 -3.51 16 9 N -0.73 1.31 5.56 -60.30 -0.33 0.98 16 10 C 0.12 -0.17 5.66 -4.05 -0.02 -0.19 16 11 C -0.12 0.36 5.17 -26.73 -0.14 0.23 16 12 C -0.11 0.25 3.65 -89.81 -0.33 -0.08 16 13 H 0.10 -0.25 8.13 -51.93 -0.42 -0.68 16 14 C -0.12 0.16 7.47 -25.92 -0.19 -0.04 16 15 C 0.07 -0.07 5.21 -25.92 -0.14 -0.20 16 16 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 17 O -0.56 -0.33 13.67 -35.23 -0.48 -0.81 16 18 C -0.17 0.27 7.46 -25.92 -0.19 0.08 16 19 C -0.12 -0.14 8.54 -39.46 -0.34 -0.48 16 20 C -0.02 -0.07 6.85 -79.95 -0.55 -0.62 16 21 N 0.04 0.16 4.45 33.96 0.15 0.31 16 22 O -0.17 -0.87 18.44 -29.46 -0.54 -1.41 16 23 O -0.13 -0.60 14.62 -35.96 -0.53 -1.13 16 24 C 0.01 0.01 5.29 -104.61 -0.55 -0.54 16 25 C -0.08 -0.01 1.73 36.01 0.06 0.05 16 26 O -0.53 -0.22 11.77 -55.46 -0.65 -0.87 16 27 Si 0.69 -1.49 30.19 -169.99 -5.13 -6.63 16 28 C -0.19 -0.25 7.65 -39.46 -0.30 -0.55 16 29 H 0.06 -0.16 7.65 -51.93 -0.40 -0.55 16 30 H 0.06 -0.14 7.68 -51.93 -0.40 -0.54 16 31 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 32 H 0.10 -0.35 7.66 -51.93 -0.40 -0.75 16 33 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 34 H 0.40 -2.00 8.47 -40.82 -0.35 -2.34 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.07 -0.23 7.84 -51.93 -0.41 -0.64 16 39 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.09 -0.05 8.10 -51.93 -0.42 -0.47 16 41 H 0.38 -1.26 9.12 45.56 0.42 -0.84 16 42 H 0.09 -0.09 7.89 -51.93 -0.41 -0.50 16 43 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.17 -0.21 5.85 -52.49 -0.31 -0.52 16 45 H 0.10 -0.02 6.07 -51.93 -0.32 -0.34 16 46 H 0.39 -1.75 8.74 45.56 0.40 -1.35 16 47 H -0.25 0.10 6.75 56.52 0.38 0.48 16 48 H -0.25 0.02 7.11 56.52 0.40 0.42 16 49 H 0.16 -0.03 3.13 -52.49 -0.16 -0.19 16 LS Contribution 410.81 15.07 6.19 6.19 Total: 0.00 -13.03 410.81 -10.23 -23.26 By element: Atomic # 1 Polarization: -7.88 SS G_CDS: -5.75 Total: -13.62 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -2.12 Total: -0.50 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.18 Total: 1.29 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -3.24 Total: -9.99 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.13 Total: -6.63 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -13.03 -10.23 -23.26 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.087 kcal (2) G-P(sol) polarization free energy of solvation -13.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds