Wall clock time and date at job start Tue Mar 9 2021 13:20:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47129 * 2 1 4 4 C 1.50696 * 109.47149 * 240.00001 * 2 1 3 5 5 C 1.35451 * 125.56563 * 119.97845 * 4 2 1 6 6 C 1.39834 * 107.86614 * 180.02562 * 5 4 2 7 7 C 1.37878 * 107.08438 * 359.97438 * 6 5 4 8 8 C 1.46681 * 126.22993 * 180.02562 * 7 6 5 9 9 O 1.21693 * 120.00109 * 0.02562 * 8 7 6 10 10 N 1.34771 * 119.99405 * 180.02562 * 8 7 6 11 11 C 1.46505 * 119.99622 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47212 * 179.97438 * 11 10 8 13 13 C 1.52992 * 109.47482 * 179.97438 * 12 11 10 14 14 H 1.09002 * 112.85191 * 314.67044 * 13 12 11 15 15 C 1.53783 * 113.61248 * 85.86354 * 13 12 11 16 16 C 1.53954 * 87.02151 * 139.95692 * 15 13 12 17 17 H 1.08998 * 113.62178 * 89.19734 * 16 15 13 18 18 O 1.42899 * 113.66730 * 220.06919 * 16 15 13 19 19 C 1.53785 * 113.61859 * 183.47213 * 13 12 11 20 20 N 1.35535 * 125.56217 * 300.32340 * 4 2 1 21 21 H 0.96698 * 113.99964 * 60.00128 * 1 2 3 22 22 H 1.09001 * 109.47302 * 119.99836 * 2 1 3 23 23 H 1.48502 * 110.00113 * 298.68158 * 3 2 1 24 24 H 1.48504 * 110.00134 * 59.99489 * 3 2 1 25 25 H 1.08000 * 126.06915 * 359.97438 * 5 4 2 26 26 H 1.08002 * 126.45885 * 179.97438 * 6 5 4 27 27 H 0.96996 * 120.00772 * 359.97438 * 10 8 7 28 28 H 1.09002 * 109.47068 * 299.99729 * 11 10 8 29 29 H 1.09001 * 109.47372 * 59.99816 * 11 10 8 30 30 H 1.09002 * 109.47153 * 300.00008 * 12 11 10 31 31 H 1.08998 * 109.47533 * 59.99637 * 12 11 10 32 32 H 1.08998 * 113.61499 * 254.52816 * 15 13 12 33 33 H 1.08992 * 113.61922 * 25.43189 * 15 13 12 34 34 H 0.96694 * 113.99745 * 277.55325 * 18 16 15 35 35 H 1.08996 * 113.60914 * 334.56443 * 19 13 12 36 36 H 1.08992 * 113.61746 * 105.47098 * 19 13 12 37 37 H 0.96995 * 125.68068 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7130 -0.1635 -2.1920 6 6 2.9563 -1.1456 -3.1571 7 6 2.3020 -2.2877 -2.7467 8 6 2.2790 -3.5742 -3.4510 9 8 2.8777 -3.7030 -4.5026 10 7 1.5948 -4.6135 -2.9334 11 6 1.5714 -5.8983 -3.6371 12 6 0.7315 -6.9000 -2.8420 13 6 0.7064 -8.2415 -3.5772 14 1 0.5230 -8.1349 -4.6463 15 6 1.9031 -9.1484 -3.2449 16 6 0.9090 -10.3240 -3.2436 17 1 0.7810 -10.7888 -4.2211 18 8 1.1466 -11.2750 -2.2039 19 6 -0.1841 -9.2977 -2.9016 20 7 1.6692 -1.9990 -1.5589 21 1 -0.3933 0.4417 -0.7650 22 1 1.7923 -0.5138 0.8900 23 1 1.5879 2.4586 -1.2242 24 1 1.5614 2.4679 1.2084 25 1 3.0821 0.8513 -2.2104 26 1 3.5456 -1.0311 -4.0549 27 1 1.1180 -4.5111 -2.0950 28 1 1.1351 -5.7626 -4.6267 29 1 2.5888 -6.2764 -3.7372 30 1 1.1681 -7.0357 -1.8525 31 1 -0.2859 -6.5222 -2.7415 32 1 2.6441 -9.2032 -4.0424 33 1 2.3445 -8.9488 -2.2686 34 1 1.8330 -11.9232 -2.4131 35 1 -0.3143 -9.1389 -1.8312 36 1 -1.1256 -9.4727 -3.4223 37 1 1.1278 -2.6157 -1.0419 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17837616_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:09 Heat of formation + Delta-G solvation = -53.760075 kcal Electronic energy + Delta-G solvation = -19645.864167 eV Core-core repulsion = 16390.996180 eV Total energy + Delta-G solvation = -3254.867986 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -42.51746 -40.67087 -40.02758 -37.92001 -36.85528 -35.66046 -32.56741 -31.80821 -31.00211 -27.24628 -26.81431 -25.49753 -23.13025 -22.71599 -21.55121 -21.10718 -20.59356 -19.87937 -18.50301 -18.18439 -17.08039 -16.88811 -16.63040 -16.37857 -16.15453 -15.52131 -15.45367 -15.19968 -15.04681 -14.58847 -14.34475 -14.04538 -13.96174 -13.66333 -13.51497 -13.42930 -12.80986 -12.58312 -12.38479 -12.11295 -11.93701 -11.81021 -11.34554 -11.21445 -10.90755 -10.76035 -10.24148 -10.08559 -9.27136 -4.99384 0.35701 1.09370 1.55532 1.58686 1.80899 2.00144 2.13610 2.39035 3.15138 3.16618 3.36077 3.47688 3.51355 3.65089 3.74895 3.85531 3.97636 4.13891 4.22021 4.22668 4.27534 4.40370 4.43965 4.56327 4.70344 4.71608 4.81412 4.87124 4.96827 4.99718 5.08138 5.12152 5.25767 5.33549 5.57722 5.81826 6.16886 6.21308 6.40307 6.65052 7.11014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.023 3.977 5 C -0.199 4.199 6 C -0.098 4.098 7 C -0.051 4.051 8 C 0.589 3.411 9 O -0.524 6.524 10 N -0.734 5.734 11 C 0.121 3.879 12 C -0.120 4.120 13 C -0.106 4.106 14 H 0.098 0.902 15 C -0.167 4.167 16 C 0.074 3.926 17 H 0.082 0.918 18 O -0.561 6.561 19 C -0.125 4.125 20 N -0.524 5.524 21 H 0.380 0.620 22 H 0.120 0.880 23 H -0.255 1.255 24 H -0.256 1.256 25 H 0.152 0.848 26 H 0.153 0.847 27 H 0.394 0.606 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.071 0.929 33 H 0.090 0.910 34 H 0.379 0.621 35 H 0.091 0.909 36 H 0.075 0.925 37 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.192 -0.408 1.791 1.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.095 4.095 5 C -0.223 4.223 6 C -0.125 4.125 7 C -0.164 4.164 8 C 0.376 3.624 9 O -0.399 6.399 10 N -0.385 5.385 11 C -0.002 4.002 12 C -0.157 4.157 13 C -0.125 4.125 14 H 0.116 0.884 15 C -0.204 4.204 16 C 0.015 3.985 17 H 0.100 0.900 18 O -0.367 6.367 19 C -0.162 4.162 20 N -0.120 5.120 21 H 0.228 0.772 22 H 0.138 0.862 23 H -0.179 1.179 24 H -0.181 1.181 25 H 0.169 0.831 26 H 0.171 0.829 27 H 0.228 0.772 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.109 0.891 34 H 0.227 0.773 35 H 0.109 0.891 36 H 0.094 0.906 37 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -0.065 0.201 1.908 1.920 hybrid contribution -1.133 -0.894 -0.186 1.456 sum -1.198 -0.693 1.722 2.210 Atomic orbital electron populations 1.86593 1.17615 1.80218 1.49705 1.24922 0.83994 1.11889 0.96292 0.94236 0.91411 0.72089 0.80566 1.21095 1.03681 0.85201 0.99542 1.20716 1.05110 1.00704 0.95777 1.21343 1.00448 0.90507 1.00152 1.20476 1.07982 0.96691 0.91299 1.17054 0.78872 0.81969 0.84458 1.90877 1.44066 1.82937 1.22062 1.45908 1.53710 1.12228 1.26682 1.21413 1.01202 0.81642 0.95989 1.21751 1.00483 0.94221 0.99290 1.22236 0.97321 0.92673 1.00314 0.88418 1.23815 0.97125 0.96668 1.02817 1.23376 0.96571 0.87643 0.90929 0.89986 1.86527 1.61550 1.45747 1.42858 1.23117 0.97183 0.93782 1.02122 1.41941 1.39874 1.11238 1.18990 0.77150 0.86203 1.17891 1.18051 0.83094 0.82916 0.77228 0.91024 0.90948 0.90917 0.90874 0.91008 0.89148 0.77312 0.89073 0.90641 0.74632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.29 12.88 -35.23 -0.45 -0.16 16 2 C -0.06 0.11 3.08 36.00 0.11 0.22 16 3 Si 0.72 -1.64 30.54 -169.99 -5.19 -6.83 16 4 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 5 C -0.20 0.02 9.32 -39.98 -0.37 -0.35 16 6 C -0.10 -0.17 10.65 -39.12 -0.42 -0.58 16 7 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 8 C 0.59 1.62 7.79 -12.85 -0.10 1.52 16 9 O -0.52 -3.47 16.88 5.20 0.09 -3.38 16 10 N -0.73 0.35 5.55 -61.62 -0.34 0.01 16 11 C 0.12 -0.08 5.67 -4.04 -0.02 -0.11 16 12 C -0.12 0.30 5.15 -26.74 -0.14 0.16 16 13 C -0.11 0.22 3.64 -89.81 -0.33 -0.11 16 14 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 15 C -0.17 0.24 7.48 -25.83 -0.19 0.04 16 16 C 0.07 -0.06 5.21 -25.82 -0.13 -0.19 16 17 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 18 O -0.56 -0.37 13.67 -35.23 -0.48 -0.86 16 19 C -0.12 0.13 7.48 -25.91 -0.19 -0.06 16 20 N -0.52 0.47 5.99 -5.69 -0.03 0.43 16 21 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 22 H 0.12 -0.33 7.96 -51.93 -0.41 -0.75 16 23 H -0.25 0.02 7.11 56.52 0.40 0.42 16 24 H -0.26 -0.24 7.11 56.52 0.40 0.17 16 25 H 0.15 -0.31 6.17 -52.49 -0.32 -0.64 16 26 H 0.15 0.22 8.06 -52.49 -0.42 -0.20 16 27 H 0.39 -1.24 7.60 -40.82 -0.31 -1.55 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 -0.18 7.88 -51.93 -0.41 -0.59 16 31 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.09 -0.07 7.92 -51.93 -0.41 -0.48 16 34 H 0.38 -1.24 9.12 45.56 0.42 -0.82 16 35 H 0.09 -0.03 8.10 -51.93 -0.42 -0.45 16 36 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.42 -1.32 8.19 -40.82 -0.33 -1.65 16 LS Contribution 315.41 15.07 4.75 4.75 Total: 0.00 -8.77 315.41 -8.95 -17.72 By element: Atomic # 1 Polarization: -6.64 SS G_CDS: -4.39 Total: -11.03 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -2.90 Total: -0.66 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.38 Total: 0.44 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.85 Total: -4.39 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.19 Total: -6.83 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -8.77 -8.95 -17.72 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.044 kcal (2) G-P(sol) polarization free energy of solvation -8.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.716 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds