Wall clock time and date at job start Tue Mar 9 2021 13:20:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47129 * 2 1 4 4 C 1.50696 * 109.47149 * 240.00001 * 2 1 3 5 5 C 1.35451 * 125.56563 * 119.97845 * 4 2 1 6 6 C 1.39834 * 107.86614 * 180.02562 * 5 4 2 7 7 C 1.37878 * 107.08438 * 359.97438 * 6 5 4 8 8 C 1.46681 * 126.22993 * 180.02562 * 7 6 5 9 9 O 1.21693 * 120.00109 * 0.02562 * 8 7 6 10 10 N 1.34771 * 119.99405 * 180.02562 * 8 7 6 11 11 C 1.46505 * 119.99622 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47212 * 179.97438 * 11 10 8 13 13 C 1.52992 * 109.47482 * 179.97438 * 12 11 10 14 14 H 1.09002 * 112.85191 * 314.67044 * 13 12 11 15 15 C 1.53783 * 113.61248 * 85.86354 * 13 12 11 16 16 C 1.53954 * 87.02151 * 139.95692 * 15 13 12 17 17 H 1.08998 * 113.62178 * 89.19734 * 16 15 13 18 18 O 1.42899 * 113.66730 * 220.06919 * 16 15 13 19 19 C 1.53785 * 113.61859 * 183.47213 * 13 12 11 20 20 N 1.35535 * 125.56217 * 300.32340 * 4 2 1 21 21 H 0.96698 * 113.99964 * 60.00128 * 1 2 3 22 22 H 1.09001 * 109.47302 * 119.99836 * 2 1 3 23 23 H 1.48502 * 110.00113 * 298.68158 * 3 2 1 24 24 H 1.48504 * 110.00134 * 59.99489 * 3 2 1 25 25 H 1.08000 * 126.06915 * 359.97438 * 5 4 2 26 26 H 1.08002 * 126.45885 * 179.97438 * 6 5 4 27 27 H 0.96996 * 120.00772 * 359.97438 * 10 8 7 28 28 H 1.09002 * 109.47068 * 299.99729 * 11 10 8 29 29 H 1.09001 * 109.47372 * 59.99816 * 11 10 8 30 30 H 1.09002 * 109.47153 * 300.00008 * 12 11 10 31 31 H 1.08998 * 109.47533 * 59.99637 * 12 11 10 32 32 H 1.08998 * 113.61499 * 254.52816 * 15 13 12 33 33 H 1.08992 * 113.61922 * 25.43189 * 15 13 12 34 34 H 0.96694 * 113.99745 * 277.55325 * 18 16 15 35 35 H 1.08996 * 113.60914 * 334.56443 * 19 13 12 36 36 H 1.08992 * 113.61746 * 105.47098 * 19 13 12 37 37 H 0.96995 * 125.68068 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7130 -0.1635 -2.1920 6 6 2.9563 -1.1456 -3.1571 7 6 2.3020 -2.2877 -2.7467 8 6 2.2790 -3.5742 -3.4510 9 8 2.8777 -3.7030 -4.5026 10 7 1.5948 -4.6135 -2.9334 11 6 1.5714 -5.8983 -3.6371 12 6 0.7315 -6.9000 -2.8420 13 6 0.7064 -8.2415 -3.5772 14 1 0.5230 -8.1349 -4.6463 15 6 1.9031 -9.1484 -3.2449 16 6 0.9090 -10.3240 -3.2436 17 1 0.7810 -10.7888 -4.2211 18 8 1.1466 -11.2750 -2.2039 19 6 -0.1841 -9.2977 -2.9016 20 7 1.6692 -1.9990 -1.5589 21 1 -0.3933 0.4417 -0.7650 22 1 1.7923 -0.5138 0.8900 23 1 1.5879 2.4586 -1.2242 24 1 1.5614 2.4679 1.2084 25 1 3.0821 0.8513 -2.2104 26 1 3.5456 -1.0311 -4.0549 27 1 1.1180 -4.5111 -2.0950 28 1 1.1351 -5.7626 -4.6267 29 1 2.5888 -6.2764 -3.7372 30 1 1.1681 -7.0357 -1.8525 31 1 -0.2859 -6.5222 -2.7415 32 1 2.6441 -9.2032 -4.0424 33 1 2.3445 -8.9488 -2.2686 34 1 1.8330 -11.9232 -2.4131 35 1 -0.3143 -9.1389 -1.8312 36 1 -1.1256 -9.4727 -3.4223 37 1 1.1278 -2.6157 -1.0419 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17837616_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:08 Heat of formation + Delta-G solvation = -58.026334 kcal Electronic energy + Delta-G solvation = -19646.049165 eV Core-core repulsion = 16390.996180 eV Total energy + Delta-G solvation = -3255.052985 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.53451 -40.64340 -40.10775 -37.84089 -36.88463 -35.70794 -32.55988 -31.83223 -30.95759 -27.21961 -26.71181 -25.44449 -23.14110 -22.67827 -21.53951 -21.14882 -20.49401 -19.88312 -18.45067 -18.14917 -17.14804 -16.91189 -16.56056 -16.33614 -16.11175 -15.50356 -15.41148 -15.20155 -15.08022 -14.55603 -14.35927 -14.06723 -13.97302 -13.65781 -13.42922 -13.35649 -12.74487 -12.51786 -12.35062 -12.01243 -11.91631 -11.72747 -11.40879 -11.17672 -10.85154 -10.68725 -10.35069 -10.08647 -9.29401 -4.82648 0.27611 1.22490 1.54480 1.70423 1.88411 1.99046 2.21030 2.25048 3.28786 3.34203 3.47749 3.58292 3.60459 3.76477 3.77010 3.98152 4.06285 4.21042 4.25278 4.33080 4.35151 4.51091 4.57847 4.64786 4.79011 4.82238 4.91151 4.94640 4.96973 5.07873 5.11009 5.23030 5.24772 5.46718 5.56689 5.78126 6.24946 6.39564 6.42799 6.85804 6.99308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.063 4.063 3 Si 0.796 3.204 4 C 0.032 3.968 5 C -0.204 4.204 6 C -0.117 4.117 7 C -0.065 4.065 8 C 0.586 3.414 9 O -0.572 6.572 10 N -0.718 5.718 11 C 0.122 3.878 12 C -0.109 4.109 13 C -0.101 4.101 14 H 0.103 0.897 15 C -0.165 4.165 16 C 0.067 3.933 17 H 0.093 0.907 18 O -0.584 6.584 19 C -0.127 4.127 20 N -0.513 5.513 21 H 0.390 0.610 22 H 0.135 0.865 23 H -0.283 1.283 24 H -0.299 1.299 25 H 0.169 0.831 26 H 0.146 0.854 27 H 0.409 0.591 28 H 0.063 0.937 29 H 0.061 0.939 30 H 0.077 0.923 31 H 0.083 0.917 32 H 0.074 0.926 33 H 0.083 0.917 34 H 0.393 0.607 35 H 0.083 0.917 36 H 0.079 0.921 37 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.258 -0.384 2.607 2.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.172 4.172 3 Si 0.699 3.301 4 C -0.087 4.087 5 C -0.228 4.228 6 C -0.144 4.144 7 C -0.179 4.179 8 C 0.374 3.626 9 O -0.452 6.452 10 N -0.370 5.370 11 C -0.001 4.001 12 C -0.147 4.147 13 C -0.120 4.120 14 H 0.121 0.879 15 C -0.203 4.203 16 C 0.009 3.991 17 H 0.111 0.889 18 O -0.392 6.392 19 C -0.165 4.165 20 N -0.110 5.110 21 H 0.239 0.761 22 H 0.153 0.847 23 H -0.209 1.209 24 H -0.227 1.227 25 H 0.186 0.814 26 H 0.164 0.836 27 H 0.245 0.755 28 H 0.081 0.919 29 H 0.079 0.921 30 H 0.095 0.905 31 H 0.102 0.898 32 H 0.092 0.908 33 H 0.101 0.899 34 H 0.243 0.757 35 H 0.101 0.899 36 H 0.098 0.902 37 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -0.535 0.179 2.754 2.811 hybrid contribution -1.029 -0.881 -0.402 1.413 sum -1.563 -0.701 2.352 2.910 Atomic orbital electron populations 1.86575 1.18129 1.80510 1.50466 1.25091 0.83580 1.12215 0.96301 0.93280 0.90197 0.70054 0.76571 1.21286 1.02858 0.85051 0.99522 1.20944 1.05265 1.01260 0.95359 1.21504 1.00910 0.91400 1.00626 1.20304 1.09057 0.96236 0.92296 1.17269 0.78503 0.82813 0.83966 1.90844 1.46330 1.83806 1.24174 1.45806 1.52633 1.11617 1.26933 1.21407 1.00878 0.81788 0.96042 1.21669 1.00649 0.93367 0.98983 1.22213 0.96614 0.92544 1.00599 0.87883 1.23774 0.97287 0.96701 1.02497 1.23534 0.96832 0.87675 0.91108 0.88942 1.86481 1.62404 1.46503 1.43807 1.23128 0.97507 0.94116 1.01743 1.41888 1.39402 1.11479 1.18226 0.76069 0.84699 1.20914 1.22676 0.81388 0.83619 0.75491 0.91854 0.92083 0.90475 0.89810 0.90774 0.89881 0.75690 0.89862 0.90214 0.73287 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.27 12.88 -148.98 -1.92 -0.65 16 2 C -0.06 0.32 3.08 71.23 0.22 0.53 16 3 Si 0.80 -4.14 30.54 68.60 2.10 -2.04 16 4 C 0.03 -0.08 6.47 41.34 0.27 0.19 16 5 C -0.20 0.12 9.32 22.01 0.21 0.33 16 6 C -0.12 -0.49 10.65 22.57 0.24 -0.25 16 7 C -0.07 -0.23 7.06 40.35 0.28 0.06 16 8 C 0.59 3.81 7.79 86.45 0.67 4.48 16 9 O -0.57 -8.71 16.88 -4.33 -0.07 -8.78 16 10 N -0.72 0.56 5.55 -467.07 -2.59 -2.03 16 11 C 0.12 -0.12 5.67 86.38 0.49 0.37 16 12 C -0.11 0.59 5.15 30.59 0.16 0.75 16 13 C -0.10 0.43 3.64 -10.27 -0.04 0.39 16 14 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 15 C -0.16 0.45 7.48 31.18 0.23 0.68 16 16 C 0.07 -0.11 5.21 31.18 0.16 0.06 16 17 H 0.09 -0.38 8.14 -2.39 -0.02 -0.39 16 18 O -0.58 -0.88 13.67 -148.98 -2.04 -2.92 16 19 C -0.13 0.29 7.48 31.12 0.23 0.52 16 20 N -0.51 1.27 5.99 -171.93 -1.03 0.24 16 21 H 0.39 -2.67 8.70 -74.06 -0.64 -3.32 16 22 H 0.14 -1.03 7.96 -2.39 -0.02 -1.05 16 23 H -0.28 0.12 7.11 99.48 0.71 0.83 16 24 H -0.30 -0.67 7.11 99.48 0.71 0.04 16 25 H 0.17 -0.83 6.17 -2.91 -0.02 -0.85 16 26 H 0.15 0.70 8.06 -2.91 -0.02 0.67 16 27 H 0.41 -2.85 7.60 -92.71 -0.70 -3.56 16 28 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 29 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 30 H 0.08 -0.45 7.88 -2.39 -0.02 -0.47 16 31 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 32 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.08 -0.10 7.92 -2.39 -0.02 -0.12 16 34 H 0.39 -2.48 9.12 -74.06 -0.68 -3.15 16 35 H 0.08 -0.05 8.10 -2.39 -0.02 -0.07 16 36 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 37 H 0.43 -3.23 8.19 -92.71 -0.76 -3.99 16 Total: 0.00 -20.98 315.41 -4.05 -25.04 By element: Atomic # 1 Polarization: -15.36 SS G_CDS: -1.62 Total: -16.98 kcal Atomic # 6 Polarization: 5.00 SS G_CDS: 3.13 Total: 8.13 kcal Atomic # 7 Polarization: 1.83 SS G_CDS: -3.62 Total: -1.79 kcal Atomic # 8 Polarization: -8.32 SS G_CDS: -4.03 Total: -12.35 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.10 Total: -2.04 kcal Total: -20.98 -4.05 -25.04 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17837616_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.990 kcal (2) G-P(sol) polarization free energy of solvation -20.985 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.975 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.036 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds