Wall clock time and date at job start Tue Mar 9 2021 12:57:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.37645 * 125.67699 * 2 1 4 4 C 1.46675 * 126.22572 * 0.02562 * 3 2 1 5 5 O 1.21692 * 119.99725 * 355.61137 * 4 3 2 6 6 N 1.34774 * 119.99911 * 175.61449 * 4 3 2 7 7 C 1.46495 * 119.99903 * 185.92829 * 6 4 3 8 8 H 1.09000 * 109.47346 * 324.99589 * 7 6 4 9 9 C 1.52999 * 109.47538 * 84.99765 * 7 6 4 10 10 C 1.52993 * 109.47499 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47201 * 300.00233 * 10 9 7 12 12 H 1.08992 * 109.46902 * 299.99662 * 11 10 9 13 13 O 1.42899 * 109.46880 * 179.97438 * 11 10 9 14 14 C 1.42896 * 114.00199 * 90.00198 * 13 11 10 15 15 F 1.39907 * 109.47274 * 59.99737 * 14 13 11 16 16 F 1.39899 * 109.47128 * 179.97438 * 14 13 11 17 17 F 1.39902 * 109.47045 * 299.99599 * 14 13 11 18 18 C 1.52999 * 109.47046 * 59.99908 * 11 10 9 19 19 C 1.53000 * 109.47010 * 204.99905 * 7 6 4 20 20 C 1.37880 * 107.54857 * 180.29275 * 3 2 1 21 21 C 1.39881 * 107.08989 * 359.74276 * 20 3 2 22 22 Br 1.89104 * 126.07054 * 179.97438 * 21 20 3 23 23 C 1.35499 * 107.85629 * 0.02562 * 21 20 3 24 24 C 1.50705 * 125.57290 * 180.02562 * 23 21 20 25 25 O 1.42899 * 109.47034 * 210.01930 * 24 23 21 26 26 Si 1.86298 * 109.47055 * 330.01745 * 24 23 21 27 27 H 1.09002 * 109.47059 * 264.40708 * 1 2 3 28 28 H 1.09005 * 109.46867 * 24.40606 * 1 2 3 29 29 H 1.08999 * 109.47185 * 144.40362 * 1 2 3 30 30 H 0.97003 * 119.99865 * 5.92094 * 6 4 3 31 31 H 1.08999 * 109.46882 * 300.00528 * 9 7 6 32 32 H 1.09000 * 109.46945 * 59.99579 * 9 7 6 33 33 H 1.08995 * 109.47333 * 179.97438 * 10 9 7 34 34 H 1.09005 * 109.46774 * 60.00159 * 10 9 7 35 35 H 1.09000 * 109.46850 * 180.02562 * 18 11 10 36 36 H 1.09000 * 109.47287 * 60.00330 * 18 11 10 37 37 H 1.08997 * 109.47290 * 299.99453 * 19 7 6 38 38 H 1.08994 * 109.47182 * 60.00246 * 19 7 6 39 39 H 1.07998 * 126.45870 * 179.76386 * 20 3 2 40 40 H 1.08997 * 109.47065 * 90.01795 * 24 23 21 41 41 H 0.96707 * 113.99597 * 59.99943 * 25 24 23 42 42 H 1.48496 * 110.00230 * 179.97438 * 26 24 23 43 43 H 1.48495 * 110.00071 * 301.32217 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8122 2.5123 0.0005 5 8 0.6244 2.7642 -0.0796 6 7 2.7091 3.5143 0.0897 7 6 2.2496 4.8991 0.2212 8 1 1.3336 5.0341 -0.3539 9 6 1.9771 5.2084 1.6946 10 6 1.4978 6.6549 1.8319 11 6 2.5767 7.6020 1.3030 12 1 3.4926 7.4667 1.8781 13 8 2.1288 8.9530 1.4308 14 6 2.4757 9.5652 2.6744 15 9 3.8675 9.5766 2.8165 16 9 1.9942 10.8786 2.6980 17 9 1.9055 8.8401 3.7263 18 6 2.8492 7.2928 -0.1704 19 6 3.3281 5.8467 -0.3079 20 6 3.5782 0.6891 -0.0067 21 6 3.5529 -0.7095 -0.0048 22 35 5.0609 -1.8504 -0.0124 23 6 2.2558 -1.1015 0.0023 24 6 1.7713 -2.5285 0.0072 25 8 0.5102 -2.6057 -0.6604 26 14 3.0079 -3.6072 -0.8748 27 1 -0.3633 -0.1002 1.0228 28 1 -0.3633 0.9359 -0.4247 29 1 -0.3633 -0.8356 -0.5982 30 1 3.6589 3.3185 0.0670 31 1 1.2088 4.5333 2.0714 32 1 2.8932 5.0734 2.2696 33 1 1.3032 6.8751 2.8815 34 1 0.5818 6.7902 1.2568 35 1 3.6182 7.9673 -0.5470 36 1 1.9332 7.4282 -0.7455 37 1 4.2442 5.7118 0.2672 38 1 3.5222 5.6264 -1.3575 39 1 4.4583 1.3149 -0.0121 40 1 1.6593 -2.8707 1.0360 41 1 0.5351 -2.3159 -1.5827 42 1 2.5421 -5.0172 -0.8764 43 1 3.1934 -3.1315 -2.2692 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:25 Heat of formation + Delta-G solvation = -229.046178 kcal Electronic energy + Delta-G solvation = -33589.707982 eV Core-core repulsion = 28267.983853 eV Total energy + Delta-G solvation = -5321.724129 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.044 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -51.25488 -49.01139 -48.93692 -42.92482 -41.07092 -39.96537 -38.12214 -37.87872 -35.22614 -34.46539 -32.49239 -31.98372 -31.32526 -29.96360 -27.41851 -27.03028 -26.20036 -24.09020 -23.81583 -22.87276 -21.51705 -21.44807 -20.68444 -20.37298 -19.96562 -19.71620 -18.96942 -18.33210 -17.49497 -17.22596 -16.92462 -16.37303 -16.27579 -16.06864 -15.80698 -15.73198 -15.61518 -15.49420 -15.37872 -15.34424 -15.14210 -15.12737 -15.07484 -14.70896 -14.58876 -14.55030 -14.31368 -14.08178 -13.91563 -13.72354 -13.34128 -13.22013 -12.99666 -12.82938 -12.74988 -12.46174 -12.25131 -12.11620 -12.04174 -11.66789 -11.60664 -11.24700 -11.16643 -10.84362 -10.23227 -9.88196 -9.34901 -4.69691 0.14040 0.35354 0.80894 0.90161 1.19075 1.44219 1.56383 1.91788 2.01991 2.13840 2.26506 2.94486 3.02211 3.04428 3.27544 3.45882 3.51523 3.55270 3.75231 3.83067 3.89010 3.96292 4.07391 4.11091 4.23513 4.25223 4.33277 4.36829 4.40383 4.43413 4.62310 4.65209 4.68993 4.75159 4.96019 5.02687 5.05058 5.07355 5.18339 5.23859 5.35245 5.42636 5.57944 5.76892 6.19443 6.40398 7.04997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.390 5.390 3 C -0.058 4.058 4 C 0.592 3.408 5 O -0.576 6.576 6 N -0.697 5.697 7 C 0.145 3.855 8 H 0.075 0.925 9 C -0.119 4.119 10 C -0.142 4.142 11 C 0.078 3.922 12 H 0.098 0.902 13 O -0.375 6.375 14 C 0.596 3.404 15 F -0.174 7.174 16 F -0.150 7.150 17 F -0.176 7.176 18 C -0.108 4.108 19 C -0.114 4.114 20 C -0.089 4.089 21 C -0.190 4.190 22 Br 0.091 6.909 23 C 0.055 3.945 24 C -0.041 4.041 25 O -0.541 6.541 26 Si 0.629 3.371 27 H 0.079 0.921 28 H 0.097 0.903 29 H 0.114 0.886 30 H 0.419 0.581 31 H 0.056 0.944 32 H 0.087 0.913 33 H 0.075 0.925 34 H 0.072 0.928 35 H 0.094 0.906 36 H 0.076 0.924 37 H 0.098 0.902 38 H 0.096 0.904 39 H 0.191 0.809 40 H 0.139 0.861 41 H 0.387 0.613 42 H -0.270 1.270 43 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.230 0.068 -0.084 6.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.062 5.062 3 C -0.172 4.172 4 C 0.380 3.620 5 O -0.458 6.458 6 N -0.348 5.348 7 C 0.041 3.959 8 H 0.093 0.907 9 C -0.158 4.158 10 C -0.180 4.180 11 C 0.023 3.977 12 H 0.116 0.884 13 O -0.299 6.299 14 C 0.504 3.496 15 F -0.156 7.156 16 F -0.132 7.132 17 F -0.158 7.158 18 C -0.146 4.146 19 C -0.152 4.152 20 C -0.116 4.116 21 C -0.276 4.276 22 Br 0.174 6.826 23 C -0.067 4.067 24 C -0.151 4.151 25 O -0.349 6.349 26 Si 0.531 3.469 27 H 0.097 0.903 28 H 0.115 0.885 29 H 0.132 0.868 30 H 0.258 0.742 31 H 0.075 0.925 32 H 0.105 0.895 33 H 0.093 0.907 34 H 0.090 0.910 35 H 0.113 0.887 36 H 0.094 0.906 37 H 0.117 0.883 38 H 0.114 0.886 39 H 0.208 0.792 40 H 0.157 0.843 41 H 0.237 0.763 42 H -0.196 1.196 43 H -0.204 1.204 Dipole moment (debyes) X Y Z Total from point charges 5.397 -0.756 -0.335 5.460 hybrid contribution -1.276 0.600 -0.283 1.438 sum 4.121 -0.157 -0.617 4.170 Atomic orbital electron populations 1.22709 0.74486 1.06539 1.04987 1.43936 1.07668 1.03918 1.50722 1.20211 0.90407 0.87792 1.18793 1.16982 0.85490 0.83815 0.75713 1.90799 1.17741 1.85019 1.52211 1.45523 1.10264 1.05516 1.73541 1.21086 0.99033 0.79623 0.96193 0.90658 1.21805 1.02510 0.94869 0.96627 1.22106 0.98963 0.94430 1.02512 1.22870 0.97991 0.76242 1.00615 0.88406 1.88376 1.78438 1.31376 1.31729 1.19559 0.74350 0.76587 0.79123 1.93264 1.30455 1.96266 1.95632 1.93266 1.88408 1.35390 1.96095 1.93262 1.85019 1.77862 1.59691 1.21545 1.03706 0.97231 0.92085 1.21734 0.98106 0.91457 1.03860 1.21531 0.95618 0.92487 1.01954 1.20695 0.90542 0.95069 1.21269 1.96320 1.32595 1.56310 1.97356 1.20984 0.89736 0.90198 1.05813 1.24721 0.93044 0.92783 1.04556 1.86548 1.29766 1.88611 1.29940 0.92709 0.92479 0.77873 0.83832 0.90274 0.88491 0.86807 0.74232 0.92498 0.89469 0.90679 0.90972 0.88735 0.90551 0.88332 0.88575 0.79226 0.84312 0.76335 1.19600 1.20382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.06 10.30 127.77 1.32 1.38 16 2 N -0.39 -0.78 3.16 -519.58 -1.64 -2.42 16 3 C -0.06 -0.04 6.89 40.35 0.28 0.24 16 4 C 0.59 0.97 7.74 86.45 0.67 1.64 16 5 O -0.58 -5.17 14.17 -4.32 -0.06 -5.23 16 6 N -0.70 4.02 5.06 -446.52 -2.26 1.76 16 7 C 0.14 -0.78 2.50 44.99 0.11 -0.67 16 8 H 0.08 -0.02 7.50 -2.39 -0.02 -0.04 16 9 C -0.12 0.52 5.49 30.59 0.17 0.68 16 10 C -0.14 0.42 5.39 30.59 0.16 0.59 16 11 C 0.08 -0.34 2.40 30.59 0.07 -0.27 16 12 H 0.10 -0.68 7.20 -2.39 -0.02 -0.69 16 13 O -0.38 -0.22 10.23 -148.98 -1.52 -1.75 16 14 C 0.60 0.82 3.71 113.37 0.42 1.24 16 15 F -0.17 -0.12 16.61 44.97 0.75 0.63 16 16 F -0.15 -0.58 17.53 44.97 0.79 0.21 16 17 F -0.18 -0.31 15.44 44.97 0.69 0.39 16 18 C -0.11 0.81 5.57 30.58 0.17 0.98 16 19 C -0.11 1.20 5.39 30.58 0.16 1.37 16 20 C -0.09 0.33 10.34 22.58 0.23 0.57 16 21 C -0.19 0.26 6.16 22.03 0.14 0.39 16 22 Br 0.09 -0.34 28.24 -20.37 -0.58 -0.92 16 23 C 0.06 0.04 6.15 41.35 0.25 0.29 16 24 C -0.04 0.00 2.99 71.24 0.21 0.21 16 25 O -0.54 -0.48 10.11 -148.98 -1.51 -1.99 16 26 Si 0.63 1.16 27.10 68.60 1.86 3.02 16 27 H 0.08 0.08 8.14 -2.39 -0.02 0.06 16 28 H 0.10 0.40 5.94 -2.38 -0.01 0.38 16 29 H 0.11 -0.15 5.24 -2.39 -0.01 -0.16 16 30 H 0.42 -5.08 7.50 -92.71 -0.70 -5.78 16 31 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 32 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 33 H 0.07 -0.12 6.50 -2.39 -0.02 -0.13 16 34 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 35 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 36 H 0.08 -0.43 8.14 -2.39 -0.02 -0.44 16 37 H 0.10 -1.40 8.14 -2.39 -0.02 -1.42 16 38 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 39 H 0.19 -2.14 7.45 -2.91 -0.02 -2.16 16 40 H 0.14 -0.26 7.96 -2.39 -0.02 -0.28 16 41 H 0.39 -1.39 8.30 -74.05 -0.61 -2.00 16 42 H -0.27 -2.21 7.11 99.48 0.71 -1.50 16 43 H -0.28 -1.88 7.11 99.48 0.71 -1.17 16 Total: 0.00 -16.44 371.62 0.72 -15.72 By element: Atomic # 1 Polarization: -17.90 SS G_CDS: -0.17 Total: -18.07 kcal Atomic # 6 Polarization: 4.27 SS G_CDS: 4.37 Total: 8.65 kcal Atomic # 7 Polarization: 3.24 SS G_CDS: -3.90 Total: -0.66 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -3.09 Total: -8.97 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 2.23 Total: 1.23 kcal Atomic # 14 Polarization: 1.16 SS G_CDS: 1.86 Total: 3.02 kcal Atomic # 35 Polarization: -0.34 SS G_CDS: -0.58 Total: -0.92 kcal Total: -16.44 0.72 -15.72 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.327 kcal (2) G-P(sol) polarization free energy of solvation -16.442 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.719 kcal (6) G-S(sol) free energy of system = (1) + (5) -229.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds