Wall clock time and date at job start Tue Mar 9 2021 12:57:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47082 * 2 1 4 4 C 1.50707 * 109.47010 * 119.99405 * 2 1 3 5 5 C 1.38234 * 119.93951 * 245.02672 * 4 2 1 6 6 C 1.38193 * 120.06712 * 179.74667 * 5 4 2 7 7 C 1.38669 * 119.95270 * 0.50286 * 6 5 4 8 8 O 1.35923 * 120.05604 * 179.74674 * 7 6 5 9 9 C 1.42895 * 117.00272 * 359.72851 * 8 7 6 10 10 C 1.50703 * 109.47270 * 180.02562 * 9 8 7 11 11 O 1.21279 * 120.00024 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99935 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99771 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47397 * 325.00275 * 13 12 10 15 15 C 1.53002 * 109.46799 * 85.00174 * 13 12 10 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 O 1.42900 * 109.47304 * 180.02562 * 17 16 15 20 20 C 1.42894 * 114.00094 * 149.99714 * 19 17 16 21 21 F 1.39910 * 109.47237 * 59.99880 * 20 19 17 22 22 F 1.39899 * 109.47168 * 179.97438 * 20 19 17 23 23 F 1.39902 * 109.47353 * 299.99910 * 20 19 17 24 24 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 25 25 C 1.52997 * 109.47317 * 300.00546 * 24 17 16 26 26 C 1.38830 * 119.88291 * 359.47568 * 7 6 5 27 27 Br 1.89103 * 120.03604 * 180.25126 * 26 7 6 28 28 C 1.38192 * 119.93188 * 0.27432 * 26 7 6 29 29 H 0.96701 * 114.00310 * 300.00836 * 1 2 3 30 30 H 1.08995 * 109.47807 * 239.99771 * 2 1 3 31 31 H 1.48509 * 109.99822 * 299.99397 * 3 2 1 32 32 H 1.48496 * 110.00201 * 61.31434 * 3 2 1 33 33 H 1.07998 * 119.97100 * 0.02562 * 5 4 2 34 34 H 1.08006 * 120.02140 * 180.27868 * 6 5 4 35 35 H 1.08995 * 109.47296 * 59.99989 * 9 8 7 36 36 H 1.08999 * 109.47100 * 300.00113 * 9 8 7 37 37 H 0.97006 * 119.99662 * 0.02562 * 12 10 9 38 38 H 1.08993 * 109.47662 * 299.99952 * 15 13 12 39 39 H 1.09002 * 109.47075 * 60.00457 * 15 13 12 40 40 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 41 41 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 42 42 H 1.08996 * 109.46929 * 179.97438 * 24 17 16 43 43 H 1.09002 * 109.46716 * 60.00455 * 24 17 16 44 44 H 1.09002 * 109.47153 * 299.99641 * 25 24 17 45 45 H 1.09001 * 109.46832 * 179.97438 * 25 24 17 46 46 H 1.07994 * 119.97877 * 179.97438 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6381 -0.0108 2.1908 6 6 3.0954 -0.6583 3.3227 7 6 2.8539 -2.0135 3.4903 8 8 3.3072 -2.6536 4.6003 9 6 4.0306 -1.8699 5.5513 10 6 4.4508 -2.7426 6.7059 11 8 4.1598 -3.9199 6.7133 12 7 5.1508 -2.2149 7.7296 13 6 5.5587 -3.0631 8.8522 14 1 4.7870 -3.8086 9.0436 15 6 6.8732 -3.7667 8.5084 16 6 7.2996 -4.6521 9.6810 17 6 7.4948 -3.7876 10.9283 18 1 8.2665 -3.0421 10.7365 19 8 7.8936 -4.6146 12.0234 20 6 8.7236 -3.9523 12.9796 21 9 8.0352 -2.8592 13.5170 22 9 9.0558 -4.8437 14.0054 23 9 9.8918 -3.5054 12.3530 24 6 6.1803 -3.0840 11.2720 25 6 5.7540 -2.1986 10.0993 26 6 2.1435 -2.7140 2.5249 27 35 1.8056 -4.5607 2.7524 28 6 1.6839 -2.0606 1.3973 29 1 -0.3934 0.4418 0.7650 30 1 1.7924 -0.5138 -0.8899 31 1 1.5615 2.4679 -1.2086 32 1 1.5878 2.4586 1.2241 33 1 2.8292 1.0439 2.0584 34 1 3.6437 -0.1100 4.0746 35 1 3.3944 -1.0641 5.9172 36 1 4.9153 -1.4466 5.0755 37 1 5.3838 -1.2732 7.7234 38 1 6.7343 -4.3822 7.6197 39 1 7.6451 -3.0212 8.3171 40 1 6.5278 -5.3976 9.8728 41 1 8.2363 -5.1530 9.4363 42 1 6.3193 -2.4686 12.1608 43 1 5.4086 -3.8295 11.4638 44 1 6.5257 -1.4531 9.9076 45 1 4.8173 -1.6978 10.3441 46 1 1.1316 -2.6049 0.6457 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849236_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:32 Heat of formation + Delta-G solvation = -278.755756 kcal Electronic energy + Delta-G solvation = -35975.665315 eV Core-core repulsion = 30270.303195 eV Total energy + Delta-G solvation = -5705.362120 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.048 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.21635 -48.94794 -48.91310 -41.82248 -41.18979 -40.21372 -39.23597 -37.98115 -37.35254 -35.03749 -33.63162 -32.20158 -32.08324 -31.11592 -30.30646 -29.01448 -26.53063 -26.25440 -24.35916 -24.15991 -23.48045 -22.46983 -21.77603 -21.44509 -20.43601 -19.94280 -19.74268 -19.68373 -18.72031 -18.30145 -17.64971 -17.52794 -17.22631 -16.83496 -16.43721 -16.20596 -16.19991 -15.85999 -15.81339 -15.67481 -15.58822 -15.50070 -15.32072 -15.15818 -15.11216 -15.05125 -14.87643 -14.75874 -14.48974 -14.41966 -14.15367 -13.89466 -13.85150 -13.65651 -13.54781 -13.02972 -12.92761 -12.49380 -12.46396 -12.44047 -12.31545 -12.29104 -11.84350 -11.77647 -11.73051 -11.40643 -11.09907 -10.98941 -10.67535 -10.31193 -10.00768 -9.37826 -5.07443 -0.12542 0.03285 0.69364 0.79217 1.18255 1.24628 1.37718 1.46869 1.87220 1.99594 2.29911 2.33602 2.95059 3.03509 3.22903 3.26804 3.32090 3.34069 3.47716 3.54951 3.59547 3.63063 3.69468 3.70940 3.75533 3.78427 3.89156 3.99163 4.01739 4.12976 4.24381 4.26901 4.41682 4.44505 4.53139 4.56133 4.70096 4.73607 4.80775 4.87054 4.87671 4.89361 4.96600 5.13371 5.19300 5.23145 5.36935 5.92005 6.20812 6.31698 6.97773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.071 4.071 3 Si 0.686 3.314 4 C -0.150 4.150 5 C -0.062 4.062 6 C -0.201 4.201 7 C 0.161 3.839 8 O -0.274 6.274 9 C 0.037 3.963 10 C 0.517 3.483 11 O -0.503 6.503 12 N -0.725 5.725 13 C 0.143 3.857 14 H 0.096 0.904 15 C -0.127 4.127 16 C -0.112 4.112 17 C 0.083 3.917 18 H 0.084 0.916 19 O -0.366 6.366 20 C 0.594 3.406 21 F -0.175 7.175 22 F -0.141 7.141 23 F -0.175 7.175 24 C -0.145 4.145 25 C -0.123 4.123 26 C -0.123 4.123 27 Br -0.024 7.024 28 C -0.023 4.023 29 H 0.376 0.624 30 H 0.121 0.879 31 H -0.255 1.255 32 H -0.260 1.260 33 H 0.137 0.863 34 H 0.141 0.859 35 H 0.097 0.903 36 H 0.098 0.902 37 H 0.402 0.598 38 H 0.083 0.917 39 H 0.071 0.929 40 H 0.084 0.916 41 H 0.082 0.918 42 H 0.084 0.916 43 H 0.084 0.916 44 H 0.074 0.926 45 H 0.082 0.918 46 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.411 7.251 0.030 8.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.151 4.151 5 C -0.080 4.080 6 C -0.220 4.220 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.042 4.042 10 C 0.301 3.699 11 O -0.376 6.376 12 N -0.379 5.379 13 C 0.039 3.961 14 H 0.114 0.886 15 C -0.166 4.166 16 C -0.150 4.150 17 C 0.028 3.972 18 H 0.102 0.898 19 O -0.290 6.290 20 C 0.502 3.498 21 F -0.157 7.157 22 F -0.123 7.123 23 F -0.158 7.158 24 C -0.183 4.183 25 C -0.161 4.161 26 C -0.203 4.203 27 Br 0.061 6.939 28 C -0.043 4.043 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.154 0.846 34 H 0.158 0.842 35 H 0.115 0.885 36 H 0.116 0.884 37 H 0.237 0.763 38 H 0.102 0.898 39 H 0.090 0.910 40 H 0.102 0.898 41 H 0.101 0.899 42 H 0.102 0.898 43 H 0.103 0.897 44 H 0.093 0.907 45 H 0.100 0.900 46 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.875 5.818 -0.342 6.499 hybrid contribution -0.549 1.179 0.791 1.523 sum 2.326 6.997 0.450 7.388 Atomic orbital electron populations 1.86626 1.17569 1.79895 1.49330 1.24994 0.84054 1.10920 0.98084 0.95073 0.91502 0.74310 0.80396 1.20205 1.02491 0.94301 0.98133 1.20980 0.94865 0.99759 0.92382 1.21159 1.07025 0.92792 1.01044 1.18636 0.93034 0.90688 0.86398 1.86288 1.67984 1.36065 1.28165 1.22555 0.97968 0.94140 0.89558 1.19962 0.78388 0.88533 0.83046 1.90819 1.53163 1.15953 1.77689 1.45844 1.57246 1.13552 1.21229 1.21099 0.97214 0.93108 0.84642 0.88560 1.21914 0.96879 0.99398 0.98370 1.21569 1.03868 0.98243 0.91286 1.22659 0.97034 0.92914 0.84635 0.89808 1.88379 1.66153 1.39263 1.35170 1.19580 0.76715 0.74774 0.78730 1.93260 1.79559 1.55983 1.86928 1.93291 1.92012 1.68895 1.58054 1.93265 1.50380 1.89595 1.82513 1.22153 0.97206 0.99924 0.99004 1.21752 1.02987 0.98041 0.93286 1.21164 1.07876 0.93183 0.98068 1.96818 1.94713 1.04757 1.97599 1.20895 0.95164 0.93602 0.94662 0.77596 0.86161 1.17994 1.18458 0.84580 0.84170 0.88518 0.88376 0.76312 0.89836 0.91036 0.89773 0.89906 0.89762 0.89698 0.90707 0.89953 0.83818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.18 12.83 -35.23 -0.45 -0.63 16 2 C -0.07 0.10 2.80 36.01 0.10 0.20 16 3 Si 0.69 -1.62 29.88 -169.99 -5.08 -6.69 16 4 C -0.15 0.14 5.35 -104.60 -0.56 -0.42 16 5 C -0.06 0.13 8.66 -39.60 -0.34 -0.21 16 6 C -0.20 0.40 9.04 -39.44 -0.36 0.04 16 7 C 0.16 0.13 6.68 -39.20 -0.26 -0.14 16 8 O -0.27 -0.43 9.01 -39.41 -0.35 -0.79 16 9 C 0.04 -0.10 5.22 36.01 0.19 0.09 16 10 C 0.52 -0.22 7.87 -10.98 -0.09 -0.31 16 11 O -0.50 -2.37 16.16 -14.35 -0.23 -2.60 16 12 N -0.72 2.68 5.08 -53.81 -0.27 2.40 16 13 C 0.14 -0.41 2.45 -67.93 -0.17 -0.57 16 14 H 0.10 -0.06 7.58 -51.93 -0.39 -0.45 16 15 C -0.13 0.33 5.49 -26.73 -0.15 0.19 16 16 C -0.11 0.24 5.57 -26.73 -0.15 0.09 16 17 C 0.08 -0.16 2.40 -26.73 -0.06 -0.23 16 18 H 0.08 -0.24 7.20 -51.93 -0.37 -0.61 16 19 O -0.37 -0.12 10.24 -35.23 -0.36 -0.48 16 20 C 0.59 0.28 3.71 101.05 0.37 0.66 16 21 F -0.18 -0.03 15.44 2.25 0.03 0.00 16 22 F -0.14 -0.23 17.53 2.25 0.04 -0.19 16 23 F -0.18 -0.09 16.61 2.25 0.04 -0.06 16 24 C -0.14 0.42 5.39 -26.73 -0.14 0.27 16 25 C -0.12 0.54 5.39 -26.73 -0.14 0.40 16 26 C -0.12 -0.23 6.24 -39.38 -0.25 -0.47 16 27 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.34 16 28 C -0.02 -0.01 9.42 -39.58 -0.37 -0.39 16 29 H 0.38 -0.94 8.70 45.56 0.40 -0.54 16 30 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 31 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 32 H -0.26 0.20 7.00 56.52 0.40 0.60 16 33 H 0.14 -0.57 4.83 -52.49 -0.25 -0.83 16 34 H 0.14 -0.72 6.30 -52.48 -0.33 -1.05 16 35 H 0.10 -0.51 7.65 -51.93 -0.40 -0.91 16 36 H 0.10 -0.54 7.67 -51.93 -0.40 -0.94 16 37 H 0.40 -2.80 8.60 -40.82 -0.35 -3.15 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 42 H 0.08 -0.22 6.50 -51.93 -0.34 -0.56 16 43 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.07 -0.42 8.14 -51.93 -0.42 -0.84 16 45 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 46 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 LS Contribution 409.79 15.07 6.18 6.18 Total: 0.00 -9.43 409.79 -10.54 -19.97 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -5.44 Total: -13.98 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -2.38 Total: -0.80 kcal Atomic # 7 Polarization: 2.68 SS G_CDS: -0.27 Total: 2.40 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -1.40 Total: -4.49 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.11 Total: -0.25 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.08 Total: -6.69 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.34 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -9.43 -10.54 -19.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -258.788 kcal (2) G-P(sol) polarization free energy of solvation -9.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.221 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.967 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds