Wall clock time and date at job start Tue Mar 9 2021 12:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47082 * 2 1 4 4 C 1.50707 * 109.47010 * 119.99405 * 2 1 3 5 5 C 1.38234 * 119.93951 * 245.02672 * 4 2 1 6 6 C 1.38193 * 120.06712 * 179.74667 * 5 4 2 7 7 C 1.38669 * 119.95270 * 0.50286 * 6 5 4 8 8 O 1.35923 * 120.05604 * 179.74674 * 7 6 5 9 9 C 1.42895 * 117.00272 * 359.72851 * 8 7 6 10 10 C 1.50703 * 109.47270 * 180.02562 * 9 8 7 11 11 O 1.21279 * 120.00024 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99935 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99771 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47397 * 325.00275 * 13 12 10 15 15 C 1.53002 * 109.46799 * 85.00174 * 13 12 10 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 O 1.42900 * 109.47304 * 180.02562 * 17 16 15 20 20 C 1.42894 * 114.00094 * 149.99714 * 19 17 16 21 21 F 1.39910 * 109.47237 * 59.99880 * 20 19 17 22 22 F 1.39899 * 109.47168 * 179.97438 * 20 19 17 23 23 F 1.39902 * 109.47353 * 299.99910 * 20 19 17 24 24 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 25 25 C 1.52997 * 109.47317 * 300.00546 * 24 17 16 26 26 C 1.38830 * 119.88291 * 359.47568 * 7 6 5 27 27 Br 1.89103 * 120.03604 * 180.25126 * 26 7 6 28 28 C 1.38192 * 119.93188 * 0.27432 * 26 7 6 29 29 H 0.96701 * 114.00310 * 300.00836 * 1 2 3 30 30 H 1.08995 * 109.47807 * 239.99771 * 2 1 3 31 31 H 1.48509 * 109.99822 * 299.99397 * 3 2 1 32 32 H 1.48496 * 110.00201 * 61.31434 * 3 2 1 33 33 H 1.07998 * 119.97100 * 0.02562 * 5 4 2 34 34 H 1.08006 * 120.02140 * 180.27868 * 6 5 4 35 35 H 1.08995 * 109.47296 * 59.99989 * 9 8 7 36 36 H 1.08999 * 109.47100 * 300.00113 * 9 8 7 37 37 H 0.97006 * 119.99662 * 0.02562 * 12 10 9 38 38 H 1.08993 * 109.47662 * 299.99952 * 15 13 12 39 39 H 1.09002 * 109.47075 * 60.00457 * 15 13 12 40 40 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 41 41 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 42 42 H 1.08996 * 109.46929 * 179.97438 * 24 17 16 43 43 H 1.09002 * 109.46716 * 60.00455 * 24 17 16 44 44 H 1.09002 * 109.47153 * 299.99641 * 25 24 17 45 45 H 1.09001 * 109.46832 * 179.97438 * 25 24 17 46 46 H 1.07994 * 119.97877 * 179.97438 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6381 -0.0108 2.1908 6 6 3.0954 -0.6583 3.3227 7 6 2.8539 -2.0135 3.4903 8 8 3.3072 -2.6536 4.6003 9 6 4.0306 -1.8699 5.5513 10 6 4.4508 -2.7426 6.7059 11 8 4.1598 -3.9199 6.7133 12 7 5.1508 -2.2149 7.7296 13 6 5.5587 -3.0631 8.8522 14 1 4.7870 -3.8086 9.0436 15 6 6.8732 -3.7667 8.5084 16 6 7.2996 -4.6521 9.6810 17 6 7.4948 -3.7876 10.9283 18 1 8.2665 -3.0421 10.7365 19 8 7.8936 -4.6146 12.0234 20 6 8.7236 -3.9523 12.9796 21 9 8.0352 -2.8592 13.5170 22 9 9.0558 -4.8437 14.0054 23 9 9.8918 -3.5054 12.3530 24 6 6.1803 -3.0840 11.2720 25 6 5.7540 -2.1986 10.0993 26 6 2.1435 -2.7140 2.5249 27 35 1.8056 -4.5607 2.7524 28 6 1.6839 -2.0606 1.3973 29 1 -0.3934 0.4418 0.7650 30 1 1.7924 -0.5138 -0.8899 31 1 1.5615 2.4679 -1.2086 32 1 1.5878 2.4586 1.2241 33 1 2.8292 1.0439 2.0584 34 1 3.6437 -0.1100 4.0746 35 1 3.3944 -1.0641 5.9172 36 1 4.9153 -1.4466 5.0755 37 1 5.3838 -1.2732 7.7234 38 1 6.7343 -4.3822 7.6197 39 1 7.6451 -3.0212 8.3171 40 1 6.5278 -5.3976 9.8728 41 1 8.2363 -5.1530 9.4363 42 1 6.3193 -2.4686 12.1608 43 1 5.4086 -3.8295 11.4638 44 1 6.5257 -1.4531 9.9076 45 1 4.8173 -1.6978 10.3441 46 1 1.1316 -2.6049 0.6457 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849236_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:31 Heat of formation + Delta-G solvation = -278.524484 kcal Electronic energy + Delta-G solvation = -35975.655286 eV Core-core repulsion = 30270.303195 eV Total energy + Delta-G solvation = -5705.352091 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.048 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -51.25312 -49.01113 -48.93110 -41.71787 -41.06806 -40.13873 -39.15891 -37.91137 -37.30009 -34.94460 -33.60333 -31.98586 -31.97450 -30.99679 -30.30618 -28.83310 -26.46958 -26.19811 -24.24062 -23.95888 -23.35053 -22.37921 -21.63984 -21.28730 -20.41619 -19.96557 -19.72638 -19.57184 -18.61168 -18.19552 -17.48065 -17.39421 -17.13892 -16.74401 -16.33840 -16.12673 -16.09699 -15.82037 -15.72880 -15.69144 -15.52895 -15.40312 -15.36554 -15.12592 -15.08288 -15.05933 -14.73185 -14.65124 -14.48310 -14.28107 -14.05703 -13.81948 -13.76970 -13.59019 -13.34428 -12.88676 -12.76027 -12.39376 -12.30399 -12.23442 -12.20443 -12.14915 -11.88271 -11.68907 -11.53504 -11.24219 -11.23196 -10.96130 -10.59563 -10.16318 -9.96104 -9.32364 -4.88662 -0.04605 0.12805 0.64976 0.80677 1.33997 1.42732 1.48663 1.62137 2.01523 2.01987 2.39855 2.51887 2.94039 3.04787 3.41375 3.43783 3.51068 3.52435 3.61615 3.76938 3.80845 3.83783 3.88979 3.96791 4.04858 4.05792 4.12540 4.12969 4.22958 4.33531 4.36687 4.46253 4.58930 4.62829 4.65600 4.73971 4.86163 4.96044 5.01128 5.02167 5.04641 5.08215 5.18283 5.24383 5.34743 5.42419 5.49916 6.08018 6.48789 6.51095 7.17731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.085 4.085 3 Si 0.778 3.222 4 C -0.149 4.149 5 C -0.056 4.056 6 C -0.189 4.189 7 C 0.150 3.850 8 O -0.306 6.306 9 C 0.031 3.969 10 C 0.512 3.488 11 O -0.567 6.567 12 N -0.704 5.704 13 C 0.144 3.856 14 H 0.067 0.933 15 C -0.120 4.120 16 C -0.109 4.109 17 C 0.079 3.921 18 H 0.099 0.901 19 O -0.378 6.378 20 C 0.597 3.403 21 F -0.173 7.173 22 F -0.151 7.151 23 F -0.175 7.175 24 C -0.144 4.144 25 C -0.112 4.112 26 C -0.145 4.145 27 Br -0.056 7.056 28 C -0.035 4.035 29 H 0.387 0.613 30 H 0.122 0.878 31 H -0.309 1.309 32 H -0.269 1.269 33 H 0.164 0.836 34 H 0.181 0.819 35 H 0.131 0.869 36 H 0.134 0.866 37 H 0.423 0.577 38 H 0.060 0.940 39 H 0.092 0.908 40 H 0.069 0.931 41 H 0.081 0.919 42 H 0.086 0.914 43 H 0.072 0.928 44 H 0.099 0.901 45 H 0.090 0.910 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.729 10.664 0.529 11.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.193 4.193 3 Si 0.683 3.317 4 C -0.151 4.151 5 C -0.074 4.074 6 C -0.208 4.208 7 C 0.102 3.898 8 O -0.218 6.218 9 C -0.046 4.046 10 C 0.298 3.702 11 O -0.445 6.445 12 N -0.359 5.359 13 C 0.039 3.961 14 H 0.085 0.915 15 C -0.158 4.158 16 C -0.148 4.148 17 C 0.024 3.976 18 H 0.117 0.883 19 O -0.303 6.303 20 C 0.505 3.495 21 F -0.155 7.155 22 F -0.132 7.132 23 F -0.157 7.157 24 C -0.182 4.182 25 C -0.150 4.150 26 C -0.225 4.225 27 Br 0.029 6.971 28 C -0.055 4.055 29 H 0.236 0.764 30 H 0.139 0.861 31 H -0.238 1.238 32 H -0.195 1.195 33 H 0.181 0.819 34 H 0.198 0.802 35 H 0.148 0.852 36 H 0.152 0.848 37 H 0.261 0.739 38 H 0.079 0.921 39 H 0.110 0.890 40 H 0.087 0.913 41 H 0.100 0.900 42 H 0.105 0.895 43 H 0.091 0.909 44 H 0.117 0.883 45 H 0.109 0.891 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 4.216 9.259 0.188 10.176 hybrid contribution -0.971 0.158 0.609 1.157 sum 3.245 9.417 0.797 9.992 Atomic orbital electron populations 1.86596 1.18697 1.80442 1.50203 1.25329 0.83372 1.12460 0.98152 0.94090 0.89849 0.71034 0.76755 1.20280 1.02590 0.93584 0.98639 1.21296 0.93567 1.00878 0.91621 1.21564 1.06047 0.91479 1.01662 1.18801 0.93211 0.91739 0.86081 1.86250 1.68674 1.37955 1.28929 1.22885 0.99738 0.93687 0.88318 1.20519 0.77745 0.88011 0.83911 1.90801 1.55833 1.18753 1.79104 1.45669 1.55812 1.14414 1.19970 1.21013 0.96163 0.93180 0.85746 0.91482 1.21828 0.97560 0.99393 0.97032 1.21530 1.03316 0.98203 0.91724 1.22845 0.97939 0.92952 0.83866 0.88286 1.88381 1.66139 1.40059 1.35696 1.19527 0.76736 0.74651 0.78595 1.93261 1.79495 1.55794 1.86921 1.93267 1.92124 1.69261 1.58570 1.93262 1.50419 1.89566 1.82470 1.22140 0.96368 0.99860 0.99815 1.21695 1.04186 0.97663 0.91418 1.21280 1.09806 0.91875 0.99509 1.96765 1.94973 1.07604 1.97715 1.20886 0.95751 0.94480 0.94411 0.76407 0.86068 1.23768 1.19529 0.81856 0.80202 0.85194 0.84812 0.73863 0.92110 0.88964 0.91267 0.90007 0.89548 0.90877 0.88301 0.89104 0.84673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.52 12.83 -148.98 -1.91 -2.43 16 2 C -0.09 0.27 2.80 71.24 0.20 0.47 16 3 Si 0.78 -4.81 29.88 68.60 2.05 -2.76 16 4 C -0.15 0.39 5.35 -19.85 -0.11 0.29 16 5 C -0.06 0.39 8.66 22.26 0.19 0.58 16 6 C -0.19 1.30 9.04 22.36 0.20 1.51 16 7 C 0.15 0.14 6.68 22.51 0.15 0.29 16 8 O -0.31 -0.93 9.01 -73.65 -0.66 -1.60 16 9 C 0.03 -0.23 5.22 71.24 0.37 0.14 16 10 C 0.51 -0.54 7.87 87.66 0.69 0.15 16 11 O -0.57 -6.52 16.16 16.01 0.26 -6.26 16 12 N -0.70 6.12 5.08 -442.54 -2.25 3.87 16 13 C 0.14 -0.82 2.45 44.99 0.11 -0.71 16 14 H 0.07 0.05 7.58 -2.39 -0.02 0.03 16 15 C -0.12 0.60 5.49 30.59 0.17 0.77 16 16 C -0.11 0.37 5.57 30.60 0.17 0.54 16 17 C 0.08 -0.32 2.40 30.60 0.07 -0.25 16 18 H 0.10 -0.70 7.20 -2.39 -0.02 -0.71 16 19 O -0.38 -0.41 10.24 -148.98 -1.53 -1.93 16 20 C 0.60 0.58 3.71 113.37 0.42 1.00 16 21 F -0.17 0.01 15.44 44.97 0.69 0.70 16 22 F -0.15 -0.57 17.53 44.97 0.79 0.22 16 23 F -0.17 -0.11 16.61 44.97 0.75 0.64 16 24 C -0.14 0.87 5.39 30.59 0.17 1.04 16 25 C -0.11 1.15 5.39 30.59 0.16 1.32 16 26 C -0.14 -0.69 6.24 22.40 0.14 -0.55 16 27 Br -0.06 -0.50 33.16 -20.37 -0.68 -1.18 16 28 C -0.04 -0.07 9.42 22.27 0.21 0.14 16 29 H 0.39 -1.95 8.70 -74.06 -0.64 -2.59 16 30 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16 31 H -0.31 -0.92 7.11 99.48 0.71 -0.22 16 32 H -0.27 1.19 7.00 99.48 0.70 1.88 16 33 H 0.16 -2.05 4.83 -2.91 -0.01 -2.06 16 34 H 0.18 -2.79 6.30 -2.91 -0.02 -2.81 16 35 H 0.13 -1.85 7.65 -2.39 -0.02 -1.87 16 36 H 0.13 -1.97 7.67 -2.39 -0.02 -1.99 16 37 H 0.42 -7.19 8.60 -92.70 -0.80 -7.99 16 38 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 40 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 41 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 42 H 0.09 -0.53 6.50 -2.39 -0.02 -0.54 16 43 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 44 H 0.10 -1.43 8.14 -2.39 -0.02 -1.45 16 45 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 46 H 0.14 0.36 8.06 -2.91 -0.02 0.33 16 Total: 0.00 -27.51 409.79 0.50 -27.01 By element: Atomic # 1 Polarization: -22.66 SS G_CDS: -0.34 Total: -23.00 kcal Atomic # 6 Polarization: 3.39 SS G_CDS: 3.32 Total: 6.72 kcal Atomic # 7 Polarization: 6.12 SS G_CDS: -2.25 Total: 3.87 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -3.84 Total: -12.22 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 2.23 Total: 1.56 kcal Atomic # 14 Polarization: -4.81 SS G_CDS: 2.05 Total: -2.76 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -0.68 Total: -1.18 kcal Total: -27.51 0.50 -27.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849236_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -251.517 kcal (2) G-P(sol) polarization free energy of solvation -27.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -279.027 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.524 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds