Wall clock time and date at job start Tue Mar 9 2021 12:59:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.33868 * 124.19606 * 2 1 4 4 O 1.21535 * 123.79021 * 0.02562 * 3 2 1 5 5 N 1.34668 * 112.41913 * 180.02562 * 3 2 1 6 6 C 1.46866 * 106.42836 * 0.02562 * 5 3 2 7 7 C 1.52468 * 110.47711 * 118.54031 * 6 5 3 8 8 C 1.53076 * 109.58621 * 181.31402 * 7 6 5 9 9 C 1.53011 * 109.42500 * 300.85723 * 8 7 6 10 10 N 1.46495 * 109.46722 * 180.48006 * 9 8 7 11 11 C 1.34773 * 119.99960 * 155.00449 * 10 9 8 12 12 O 1.21567 * 119.99915 * 359.97438 * 11 10 9 13 13 C 1.47725 * 120.00218 * 180.02562 * 11 10 9 14 14 C 1.39629 * 120.11971 * 179.72732 * 13 11 10 15 15 C 1.37858 * 119.87452 * 179.67699 * 14 13 11 16 16 C 1.50710 * 119.93817 * 180.29694 * 15 14 13 17 17 O 1.42895 * 109.46923 * 15.31502 * 16 15 14 18 18 Si 1.86289 * 109.47396 * 135.32057 * 16 15 14 19 19 C 1.38629 * 120.12342 * 0.61527 * 15 14 13 20 20 F 1.35102 * 119.88182 * 179.70130 * 19 15 14 21 21 C 1.38675 * 120.23796 * 359.67864 * 19 15 14 22 22 C 1.37821 * 120.11823 * 0.02562 * 21 19 15 23 23 C 1.53009 * 109.50004 * 60.46960 * 9 8 7 24 24 C 1.52469 * 110.48421 * 241.44531 * 6 5 3 25 25 C 1.34923 * 124.19587 * 180.02562 * 2 1 3 26 26 O 1.21232 * 127.25338 * 359.97438 * 25 2 1 27 27 H 1.08997 * 109.47214 * 359.97372 * 1 2 3 28 28 H 1.08994 * 109.47113 * 119.97276 * 1 2 3 29 29 H 1.08998 * 109.46557 * 239.97269 * 1 2 3 30 30 H 0.97010 * 126.78749 * 180.02562 * 5 3 2 31 31 H 1.09002 * 109.45719 * 61.27910 * 7 6 5 32 32 H 1.09002 * 109.45727 * 301.34587 * 7 6 5 33 33 H 1.08997 * 109.48530 * 60.84506 * 8 7 6 34 34 H 1.09001 * 109.48103 * 180.87802 * 8 7 6 35 35 H 1.09000 * 109.46593 * 300.46082 * 9 8 7 36 36 H 0.97002 * 120.00146 * 334.99795 * 10 9 8 37 37 H 1.07998 * 120.06275 * 359.96951 * 14 13 11 38 38 H 1.09004 * 109.46465 * 255.32187 * 16 15 14 39 39 H 0.96698 * 114.00059 * 180.02562 * 17 16 15 40 40 H 1.48504 * 110.00024 * 300.00171 * 18 16 15 41 41 H 1.48502 * 110.00254 * 61.31694 * 18 16 15 42 42 H 1.08002 * 119.94275 * 180.02562 * 21 19 15 43 43 H 1.08001 * 120.05789 * 180.02562 * 22 21 19 44 44 H 1.09001 * 109.47215 * 179.54526 * 23 9 8 45 45 H 1.08994 * 109.47791 * 59.52008 * 23 9 8 46 46 H 1.09000 * 109.45189 * 298.72944 * 24 6 5 47 47 H 1.08998 * 109.44944 * 58.65923 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1073 0.0000 4 8 1.7619 2.2340 0.0005 5 7 3.5357 0.8324 -0.0006 6 6 3.6548 -0.6314 -0.0016 7 6 4.3779 -1.1069 -1.2569 8 6 4.4618 -2.6353 -1.2530 9 6 5.2135 -3.1005 -0.0041 10 7 5.3043 -4.5626 -0.0052 11 6 6.3003 -5.1765 0.6638 12 8 7.1237 -4.5168 1.2677 13 6 6.3923 -6.6509 0.6622 14 6 7.4265 -7.2891 1.3497 15 6 7.5036 -8.6655 1.3504 16 6 8.6154 -9.3562 2.0976 17 8 9.2318 -8.4314 2.9959 18 14 7.9186 -10.7890 3.0628 19 6 6.5642 -9.4154 0.6597 20 9 6.6479 -10.7638 0.6587 21 6 5.5385 -8.7864 -0.0298 22 6 5.4485 -7.4111 -0.0321 23 6 4.4628 -2.6372 1.2461 24 6 4.3789 -1.1087 1.2524 25 6 2.2233 -1.1160 -0.0005 26 8 1.8377 -2.2653 -0.0006 27 1 -0.3633 1.0276 0.0005 28 1 -0.3633 -0.5134 -0.8902 29 1 -0.3632 -0.5143 0.8898 30 1 4.2630 1.4744 -0.0003 31 1 5.3842 -0.6882 -1.2769 32 1 3.8299 -0.7757 -2.1390 33 1 3.4557 -3.0546 -1.2489 34 1 4.9927 -2.9725 -2.1433 35 1 6.2167 -2.6744 -0.0041 36 1 4.6475 -5.0890 -0.4873 37 1 8.1618 -6.7058 1.8838 38 1 9.3572 -9.7226 1.3878 39 1 9.9582 -8.8082 3.5110 40 1 6.9058 -10.3027 4.0340 41 1 7.3027 -11.7735 2.1372 42 1 4.8090 -9.3752 -0.5660 43 1 4.6491 -6.9223 -0.5691 44 1 4.9943 -2.9757 2.1355 45 1 3.4567 -3.0564 1.2422 46 1 5.3851 -0.6900 1.2721 47 1 3.8315 -0.7789 2.1353 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_12496548.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:13 Heat of formation + Delta-G solvation = -105.862429 kcal Electronic energy + Delta-G solvation = -35110.236646 eV Core-core repulsion = 30175.567454 eV Total energy + Delta-G solvation = -4934.669192 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.147 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.46565 -43.87998 -41.48344 -40.28022 -39.62773 -38.70877 -37.69100 -37.14912 -36.02322 -34.33534 -32.92598 -32.30838 -32.03537 -29.72777 -29.04884 -27.07874 -25.61833 -24.59594 -24.27393 -23.30663 -23.08585 -22.53583 -21.35490 -20.65142 -19.25970 -19.17130 -18.87481 -18.38969 -18.04956 -17.78492 -17.54007 -17.30584 -16.81644 -16.67681 -16.51720 -16.33607 -16.15251 -15.82196 -15.73988 -15.59383 -15.17655 -15.05219 -15.03057 -14.70945 -14.51515 -14.41628 -14.23652 -13.92890 -13.82177 -13.65452 -13.61987 -13.58335 -13.21635 -12.95781 -12.75915 -12.48506 -12.30887 -12.22795 -11.95311 -11.80575 -11.59652 -11.03859 -10.96043 -10.93552 -10.88976 -10.57983 -10.22758 -10.05614 -9.69981 -4.96921 -0.54683 -0.02212 0.46730 1.09286 1.21447 1.63614 1.68226 1.88727 1.89445 1.98528 2.00991 2.57655 2.71570 2.81926 3.03241 3.20048 3.23749 3.35926 3.51469 3.58459 3.70060 3.79743 3.84158 3.89507 3.97542 4.04054 4.09409 4.14295 4.23936 4.26458 4.29059 4.38770 4.40417 4.42907 4.49994 4.58441 4.63397 4.68655 4.72028 4.79864 4.83136 4.85297 4.97543 5.05360 5.06518 5.13683 5.36066 5.54949 5.64234 5.89751 6.24104 6.37008 6.50473 7.00910 7.11446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.581 5.581 3 C 0.702 3.298 4 O -0.539 6.539 5 N -0.719 5.719 6 C 0.120 3.880 7 C -0.107 4.107 8 C -0.136 4.136 9 C 0.150 3.850 10 N -0.721 5.721 11 C 0.564 3.436 12 O -0.527 6.527 13 C -0.145 4.145 14 C -0.005 4.005 15 C -0.119 4.119 16 C -0.069 4.069 17 O -0.544 6.544 18 Si 0.676 3.324 19 C 0.108 3.892 20 F -0.117 7.117 21 C -0.151 4.151 22 C -0.060 4.060 23 C -0.139 4.139 24 C -0.108 4.108 25 C 0.532 3.468 26 O -0.455 6.455 27 H 0.098 0.902 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.442 0.558 31 H 0.092 0.908 32 H 0.081 0.919 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.094 0.906 36 H 0.401 0.599 37 H 0.159 0.841 38 H 0.084 0.916 39 H 0.389 0.611 40 H -0.258 1.258 41 H -0.229 1.229 42 H 0.148 0.852 43 H 0.140 0.860 44 H 0.081 0.919 45 H 0.084 0.916 46 H 0.091 0.909 47 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.685 -2.954 -1.861 3.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.328 5.328 3 C 0.402 3.598 4 O -0.411 6.411 5 N -0.383 5.383 6 C 0.030 3.970 7 C -0.146 4.146 8 C -0.174 4.174 9 C 0.045 3.955 10 N -0.372 5.372 11 C 0.351 3.649 12 O -0.404 6.404 13 C -0.148 4.148 14 C -0.024 4.024 15 C -0.120 4.120 16 C -0.178 4.178 17 O -0.351 6.351 18 Si 0.575 3.425 19 C 0.088 3.912 20 F -0.096 7.096 21 C -0.170 4.170 22 C -0.079 4.079 23 C -0.178 4.178 24 C -0.148 4.148 25 C 0.319 3.681 26 O -0.324 6.324 27 H 0.117 0.883 28 H 0.098 0.902 29 H 0.098 0.902 30 H 0.287 0.713 31 H 0.111 0.889 32 H 0.100 0.900 33 H 0.107 0.893 34 H 0.101 0.899 35 H 0.112 0.888 36 H 0.237 0.763 37 H 0.177 0.823 38 H 0.102 0.898 39 H 0.237 0.763 40 H -0.182 1.182 41 H -0.154 1.154 42 H 0.166 0.834 43 H 0.157 0.843 44 H 0.099 0.901 45 H 0.103 0.897 46 H 0.110 0.890 47 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.513 -2.594 -1.482 3.031 hybrid contribution -0.199 0.245 -0.732 0.797 sum 0.314 -2.349 -2.214 3.243 Atomic orbital electron populations 1.21910 0.74693 1.05390 1.03681 1.46351 1.09809 1.07981 1.68610 1.15941 0.82223 0.84182 0.77435 1.91048 1.75155 1.20275 1.54666 1.45602 1.06701 1.07057 1.78933 1.21176 0.94567 0.81458 0.99839 1.21588 1.01856 0.96187 0.94977 1.21942 1.02799 0.94714 0.97966 1.20970 1.00530 0.79432 0.94549 1.45903 1.30155 1.07540 1.53642 1.18078 0.81010 0.87036 0.78779 1.90816 1.40464 1.66254 1.42834 1.20045 0.98429 0.93384 1.02989 1.20991 0.95719 0.92356 0.93308 1.19419 0.97563 0.94421 1.00556 1.24538 0.96942 0.99989 0.96349 1.86393 1.53429 1.38667 1.56594 0.95920 0.86302 0.79887 0.80436 1.17770 0.96517 0.77050 0.99836 1.91498 1.95659 1.28762 1.93676 1.21052 0.98765 0.95328 1.01853 1.21196 0.97391 0.92974 0.96314 1.22070 1.02720 0.93914 0.99053 1.21619 1.01640 0.96782 0.94720 1.20645 0.88056 0.84919 0.74516 1.90758 1.78929 1.17535 1.45155 0.88292 0.90234 0.90242 0.71276 0.88925 0.89998 0.89338 0.89850 0.88784 0.76333 0.82348 0.89783 0.76262 1.18229 1.15362 0.83445 0.84269 0.90058 0.89698 0.89011 0.90257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.09 10.89 59.85 0.65 0.56 16 2 N -0.58 -0.29 3.01 -128.25 -0.39 -0.68 16 3 C 0.70 1.11 8.63 -87.83 -0.76 0.35 16 4 O -0.54 -2.83 17.24 5.33 0.09 -2.73 16 5 N -0.72 1.22 5.88 -53.88 -0.32 0.90 16 6 C 0.12 -0.25 1.01 -133.11 -0.13 -0.38 16 7 C -0.11 0.36 5.10 -26.96 -0.14 0.23 16 8 C -0.14 0.41 5.14 -26.69 -0.14 0.27 16 9 C 0.15 -0.22 2.44 -67.92 -0.17 -0.39 16 10 N -0.72 0.77 5.03 -54.78 -0.28 0.50 16 11 C 0.56 1.09 7.73 -12.39 -0.10 1.00 16 12 O -0.53 -2.83 16.01 5.31 0.08 -2.74 16 13 C -0.15 -0.19 5.87 -104.97 -0.62 -0.81 16 14 C 0.00 -0.01 8.90 -39.20 -0.35 -0.36 16 15 C -0.12 -0.24 5.15 -104.61 -0.54 -0.78 16 16 C -0.07 0.00 2.95 36.01 0.11 0.10 16 17 O -0.54 0.07 11.48 -35.23 -0.40 -0.34 16 18 Si 0.68 -0.25 30.73 -169.99 -5.22 -5.48 16 19 C 0.11 0.18 6.67 -39.28 -0.26 -0.08 16 20 F -0.12 -0.29 12.85 2.25 0.03 -0.26 16 21 C -0.15 0.04 10.01 -39.57 -0.40 -0.35 16 22 C -0.06 0.06 9.54 -39.20 -0.37 -0.31 16 23 C -0.14 0.13 5.24 -26.69 -0.14 -0.01 16 24 C -0.11 0.24 5.10 -26.96 -0.14 0.10 16 25 C 0.53 0.04 6.53 -10.71 -0.07 -0.03 16 26 O -0.45 -0.70 13.94 5.60 0.08 -0.62 16 27 H 0.10 -0.09 7.45 -51.93 -0.39 -0.48 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 30 H 0.44 -1.63 8.96 -40.82 -0.37 -1.99 16 31 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 32 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.09 -0.18 6.12 -51.93 -0.32 -0.50 16 34 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.09 -0.05 7.58 -51.93 -0.39 -0.44 16 36 H 0.40 -1.33 6.63 -40.82 -0.27 -1.61 16 37 H 0.16 0.58 6.72 -52.49 -0.35 0.23 16 38 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 39 H 0.39 -1.99 8.74 45.56 0.40 -1.59 16 40 H -0.26 -0.90 7.11 56.52 0.40 -0.50 16 41 H -0.23 -0.44 5.39 56.52 0.30 -0.14 16 42 H 0.15 -0.36 8.06 -52.49 -0.42 -0.78 16 43 H 0.14 -0.60 6.40 -52.49 -0.34 -0.93 16 44 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 45 H 0.08 0.01 6.11 -51.93 -0.32 -0.31 16 46 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 47 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 LS Contribution 381.46 15.07 5.75 5.75 Total: 0.00 -11.30 381.46 -9.98 -21.29 By element: Atomic # 1 Polarization: -8.82 SS G_CDS: -5.85 Total: -14.68 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -3.55 Total: -0.90 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -0.98 Total: 0.72 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -0.15 Total: -6.44 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.03 Total: -0.26 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.22 Total: -5.48 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -11.30 -9.98 -21.29 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12496548.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.577 kcal (2) G-P(sol) polarization free energy of solvation -11.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds