Wall clock time and date at job start Tue Mar 9 2021 12:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.33868 * 124.19606 * 2 1 4 4 O 1.21535 * 123.79021 * 0.02562 * 3 2 1 5 5 N 1.34668 * 112.41913 * 180.02562 * 3 2 1 6 6 C 1.46866 * 106.42836 * 0.02562 * 5 3 2 7 7 C 1.52468 * 110.47711 * 118.54031 * 6 5 3 8 8 C 1.53076 * 109.58621 * 181.31402 * 7 6 5 9 9 C 1.53011 * 109.42500 * 300.85723 * 8 7 6 10 10 N 1.46495 * 109.46722 * 180.48006 * 9 8 7 11 11 C 1.34773 * 119.99960 * 155.00449 * 10 9 8 12 12 O 1.21567 * 119.99915 * 359.97438 * 11 10 9 13 13 C 1.47725 * 120.00218 * 180.02562 * 11 10 9 14 14 C 1.39629 * 120.11971 * 179.72732 * 13 11 10 15 15 C 1.37858 * 119.87452 * 179.67699 * 14 13 11 16 16 C 1.50710 * 119.93817 * 180.29694 * 15 14 13 17 17 O 1.42895 * 109.46923 * 15.31502 * 16 15 14 18 18 Si 1.86289 * 109.47396 * 135.32057 * 16 15 14 19 19 C 1.38629 * 120.12342 * 0.61527 * 15 14 13 20 20 F 1.35102 * 119.88182 * 179.70130 * 19 15 14 21 21 C 1.38675 * 120.23796 * 359.67864 * 19 15 14 22 22 C 1.37821 * 120.11823 * 0.02562 * 21 19 15 23 23 C 1.53009 * 109.50004 * 60.46960 * 9 8 7 24 24 C 1.52469 * 110.48421 * 241.44531 * 6 5 3 25 25 C 1.34923 * 124.19587 * 180.02562 * 2 1 3 26 26 O 1.21232 * 127.25338 * 359.97438 * 25 2 1 27 27 H 1.08997 * 109.47214 * 359.97372 * 1 2 3 28 28 H 1.08994 * 109.47113 * 119.97276 * 1 2 3 29 29 H 1.08998 * 109.46557 * 239.97269 * 1 2 3 30 30 H 0.97010 * 126.78749 * 180.02562 * 5 3 2 31 31 H 1.09002 * 109.45719 * 61.27910 * 7 6 5 32 32 H 1.09002 * 109.45727 * 301.34587 * 7 6 5 33 33 H 1.08997 * 109.48530 * 60.84506 * 8 7 6 34 34 H 1.09001 * 109.48103 * 180.87802 * 8 7 6 35 35 H 1.09000 * 109.46593 * 300.46082 * 9 8 7 36 36 H 0.97002 * 120.00146 * 334.99795 * 10 9 8 37 37 H 1.07998 * 120.06275 * 359.96951 * 14 13 11 38 38 H 1.09004 * 109.46465 * 255.32187 * 16 15 14 39 39 H 0.96698 * 114.00059 * 180.02562 * 17 16 15 40 40 H 1.48504 * 110.00024 * 300.00171 * 18 16 15 41 41 H 1.48502 * 110.00254 * 61.31694 * 18 16 15 42 42 H 1.08002 * 119.94275 * 180.02562 * 21 19 15 43 43 H 1.08001 * 120.05789 * 180.02562 * 22 21 19 44 44 H 1.09001 * 109.47215 * 179.54526 * 23 9 8 45 45 H 1.08994 * 109.47791 * 59.52008 * 23 9 8 46 46 H 1.09000 * 109.45189 * 298.72944 * 24 6 5 47 47 H 1.08998 * 109.44944 * 58.65923 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2174 1.1073 0.0000 4 8 1.7619 2.2340 0.0005 5 7 3.5357 0.8324 -0.0006 6 6 3.6548 -0.6314 -0.0016 7 6 4.3779 -1.1069 -1.2569 8 6 4.4618 -2.6353 -1.2530 9 6 5.2135 -3.1005 -0.0041 10 7 5.3043 -4.5626 -0.0052 11 6 6.3003 -5.1765 0.6638 12 8 7.1237 -4.5168 1.2677 13 6 6.3923 -6.6509 0.6622 14 6 7.4265 -7.2891 1.3497 15 6 7.5036 -8.6655 1.3504 16 6 8.6154 -9.3562 2.0976 17 8 9.2318 -8.4314 2.9959 18 14 7.9186 -10.7890 3.0628 19 6 6.5642 -9.4154 0.6597 20 9 6.6479 -10.7638 0.6587 21 6 5.5385 -8.7864 -0.0298 22 6 5.4485 -7.4111 -0.0321 23 6 4.4628 -2.6372 1.2461 24 6 4.3789 -1.1087 1.2524 25 6 2.2233 -1.1160 -0.0005 26 8 1.8377 -2.2653 -0.0006 27 1 -0.3633 1.0276 0.0005 28 1 -0.3633 -0.5134 -0.8902 29 1 -0.3632 -0.5143 0.8898 30 1 4.2630 1.4744 -0.0003 31 1 5.3842 -0.6882 -1.2769 32 1 3.8299 -0.7757 -2.1390 33 1 3.4557 -3.0546 -1.2489 34 1 4.9927 -2.9725 -2.1433 35 1 6.2167 -2.6744 -0.0041 36 1 4.6475 -5.0890 -0.4873 37 1 8.1618 -6.7058 1.8838 38 1 9.3572 -9.7226 1.3878 39 1 9.9582 -8.8082 3.5110 40 1 6.9058 -10.3027 4.0340 41 1 7.3027 -11.7735 2.1372 42 1 4.8090 -9.3752 -0.5660 43 1 4.6491 -6.9223 -0.5691 44 1 4.9943 -2.9757 2.1355 45 1 3.4567 -3.0564 1.2422 46 1 5.3851 -0.6900 1.2721 47 1 3.8315 -0.7789 2.1353 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17849352_12496548.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:11 Heat of formation + Delta-G solvation = -109.951535 kcal Electronic energy + Delta-G solvation = -35110.413963 eV Core-core repulsion = 30175.567454 eV Total energy + Delta-G solvation = -4934.846509 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.147 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -50.58166 -43.87544 -41.55374 -40.31107 -39.70280 -38.70887 -37.67018 -37.27235 -36.04563 -34.34844 -32.92782 -32.14581 -32.07961 -29.69213 -28.99028 -27.07942 -25.64891 -24.63241 -24.12521 -23.31833 -23.04652 -22.48778 -21.41586 -20.62008 -19.28222 -19.17330 -18.90147 -18.42298 -18.06006 -17.78151 -17.55075 -17.38781 -16.85957 -16.66915 -16.57181 -16.37018 -16.19877 -15.83741 -15.73565 -15.62114 -15.24483 -15.04230 -14.99099 -14.79860 -14.42677 -14.36467 -14.20050 -13.87305 -13.76081 -13.71911 -13.55142 -13.43908 -13.27499 -12.89995 -12.80511 -12.31668 -12.26239 -12.21473 -11.99296 -11.83178 -11.75252 -11.18283 -10.95636 -10.94630 -10.91593 -10.53150 -10.28886 -10.07695 -9.71626 -4.98277 -0.61752 -0.05398 0.43991 1.12166 1.20807 1.55862 1.62489 1.81992 1.91935 1.95158 2.04023 2.50837 2.76238 2.82294 3.05180 3.31840 3.38339 3.39971 3.53549 3.70472 3.71380 3.90528 3.93628 3.95325 4.10427 4.12046 4.16092 4.31043 4.33891 4.36243 4.40720 4.43885 4.51077 4.53926 4.56516 4.70383 4.71116 4.78569 4.80601 4.88071 4.95708 4.97327 5.00047 5.02246 5.14803 5.18673 5.39787 5.51567 5.71904 5.88561 6.26216 6.39859 6.81168 6.98234 7.06365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.584 5.584 3 C 0.699 3.301 4 O -0.580 6.580 5 N -0.702 5.702 6 C 0.128 3.872 7 C -0.105 4.105 8 C -0.127 4.127 9 C 0.149 3.851 10 N -0.706 5.706 11 C 0.563 3.437 12 O -0.569 6.569 13 C -0.153 4.153 14 C -0.024 4.024 15 C -0.135 4.135 16 C -0.076 4.076 17 O -0.561 6.561 18 Si 0.765 3.235 19 C 0.089 3.911 20 F -0.125 7.125 21 C -0.147 4.147 22 C -0.048 4.048 23 C -0.133 4.133 24 C -0.105 4.105 25 C 0.529 3.471 26 O -0.470 6.470 27 H 0.094 0.906 28 H 0.090 0.910 29 H 0.086 0.914 30 H 0.452 0.548 31 H 0.112 0.888 32 H 0.087 0.913 33 H 0.082 0.918 34 H 0.099 0.901 35 H 0.088 0.912 36 H 0.414 0.586 37 H 0.140 0.860 38 H 0.103 0.897 39 H 0.408 0.592 40 H -0.314 1.314 41 H -0.259 1.259 42 H 0.174 0.826 43 H 0.176 0.824 44 H 0.062 0.938 45 H 0.075 0.925 46 H 0.108 0.892 47 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.723 -3.277 -3.313 4.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.399 3.601 4 O -0.457 6.457 5 N -0.366 5.366 6 C 0.037 3.963 7 C -0.144 4.144 8 C -0.165 4.165 9 C 0.045 3.955 10 N -0.357 5.357 11 C 0.351 3.649 12 O -0.449 6.449 13 C -0.157 4.157 14 C -0.043 4.043 15 C -0.136 4.136 16 C -0.185 4.185 17 O -0.371 6.371 18 Si 0.669 3.331 19 C 0.069 3.931 20 F -0.103 7.103 21 C -0.165 4.165 22 C -0.066 4.066 23 C -0.172 4.172 24 C -0.144 4.144 25 C 0.316 3.684 26 O -0.340 6.340 27 H 0.112 0.888 28 H 0.109 0.891 29 H 0.105 0.895 30 H 0.300 0.700 31 H 0.131 0.869 32 H 0.105 0.895 33 H 0.101 0.899 34 H 0.117 0.883 35 H 0.106 0.894 36 H 0.252 0.748 37 H 0.158 0.842 38 H 0.121 0.879 39 H 0.260 0.740 40 H -0.243 1.243 41 H -0.185 1.185 42 H 0.191 0.809 43 H 0.194 0.806 44 H 0.080 0.920 45 H 0.094 0.906 46 H 0.126 0.874 47 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.586 -2.942 -2.956 4.211 hybrid contribution -0.281 0.328 -0.246 0.496 sum 0.305 -2.614 -3.202 4.145 Atomic orbital electron populations 1.22037 0.74154 1.05389 1.04632 1.46465 1.10424 1.07913 1.68273 1.16089 0.83056 0.83750 0.77160 1.91017 1.76021 1.21830 1.56822 1.45548 1.05898 1.07511 1.77618 1.21205 0.93442 0.80913 1.00746 1.21643 1.02758 0.95907 0.94073 1.21879 1.02270 0.94880 0.97504 1.21027 1.00343 0.79012 0.95113 1.45823 1.29386 1.07975 1.52523 1.18219 0.81016 0.87237 0.78474 1.90792 1.42221 1.67056 1.44810 1.20122 0.98846 0.93271 1.03419 1.20905 0.96337 0.92646 0.94407 1.19674 0.98472 0.94440 1.01031 1.24687 0.97207 0.99766 0.96806 1.86368 1.54454 1.39350 1.56966 0.95034 0.83966 0.77359 0.76706 1.18040 0.97400 0.76862 1.00767 1.91482 1.95780 1.29230 1.93855 1.21414 0.98330 0.95789 1.00955 1.21535 0.97222 0.92658 0.95225 1.21969 1.01857 0.94755 0.98614 1.21595 1.02435 0.95903 0.94436 1.20962 0.88815 0.84576 0.74006 1.90749 1.79388 1.17986 1.45847 0.88767 0.89108 0.89516 0.70040 0.86944 0.89479 0.89928 0.88292 0.89418 0.74806 0.84235 0.87927 0.73952 1.24257 1.18538 0.80890 0.80635 0.91962 0.90597 0.87409 0.90774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.14 10.89 127.77 1.39 1.25 16 2 N -0.58 -0.67 3.01 -796.78 -2.40 -3.07 16 3 C 0.70 2.36 8.63 179.37 1.55 3.91 16 4 O -0.58 -6.61 17.24 -3.83 -0.07 -6.68 16 5 N -0.70 2.81 5.88 -442.71 -2.60 0.20 16 6 C 0.13 -0.63 1.01 2.57 0.00 -0.63 16 7 C -0.11 0.90 5.10 30.44 0.16 1.06 16 8 C -0.13 0.97 5.14 30.62 0.16 1.13 16 9 C 0.15 -0.53 2.44 45.00 0.11 -0.42 16 10 N -0.71 1.94 5.03 -445.50 -2.24 -0.29 16 11 C 0.56 2.48 7.73 86.75 0.67 3.15 16 12 O -0.57 -7.01 16.01 -3.93 -0.06 -7.08 16 13 C -0.15 -0.46 5.87 -20.09 -0.12 -0.58 16 14 C -0.02 -0.16 8.90 22.52 0.20 0.04 16 15 C -0.14 -0.69 5.15 -19.86 -0.10 -0.79 16 16 C -0.08 -0.06 2.95 71.24 0.21 0.15 16 17 O -0.56 -0.40 11.48 -148.98 -1.71 -2.11 16 18 Si 0.76 0.12 30.73 68.60 2.11 2.23 16 19 C 0.09 0.32 6.67 22.47 0.15 0.47 16 20 F -0.12 -0.67 12.85 44.97 0.58 -0.09 16 21 C -0.15 0.24 10.01 22.28 0.22 0.47 16 22 C -0.05 0.16 9.54 22.52 0.21 0.37 16 23 C -0.13 0.22 5.24 30.62 0.16 0.38 16 24 C -0.10 0.50 5.10 30.44 0.16 0.65 16 25 C 0.53 -0.09 6.53 87.77 0.57 0.48 16 26 O -0.47 -1.29 13.94 -2.88 -0.04 -1.33 16 27 H 0.09 -0.07 7.45 -2.39 -0.02 -0.09 16 28 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 29 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.45 -3.74 8.96 -92.70 -0.83 -4.58 16 31 H 0.11 -1.34 8.14 -2.39 -0.02 -1.36 16 32 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 33 H 0.08 -0.47 6.12 -2.39 -0.01 -0.48 16 34 H 0.10 -1.00 8.14 -2.39 -0.02 -1.02 16 35 H 0.09 -0.13 7.58 -2.39 -0.02 -0.15 16 36 H 0.41 -3.44 6.63 -92.71 -0.61 -4.06 16 37 H 0.14 1.41 6.72 -2.91 -0.02 1.39 16 38 H 0.10 -0.33 7.96 -2.38 -0.02 -0.35 16 39 H 0.41 -4.06 8.74 -74.06 -0.65 -4.70 16 40 H -0.31 -2.98 7.11 99.48 0.71 -2.27 16 41 H -0.26 -1.22 5.39 99.48 0.54 -0.69 16 42 H 0.17 -1.23 8.06 -2.91 -0.02 -1.26 16 43 H 0.18 -2.00 6.40 -2.91 -0.02 -2.02 16 44 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 45 H 0.08 0.03 6.11 -2.39 -0.01 0.02 16 46 H 0.11 -0.82 8.14 -2.39 -0.02 -0.84 16 47 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 Total: 0.00 -29.31 381.46 -1.88 -31.19 By element: Atomic # 1 Polarization: -22.92 SS G_CDS: -1.15 Total: -24.07 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: 5.70 Total: 11.09 kcal Atomic # 7 Polarization: 4.09 SS G_CDS: -7.24 Total: -3.16 kcal Atomic # 8 Polarization: -15.32 SS G_CDS: -1.88 Total: -17.19 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.58 Total: -0.09 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: 2.11 Total: 2.23 kcal Total: -29.31 -1.88 -31.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_12496548.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.758 kcal (2) G-P(sol) polarization free energy of solvation -29.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds