Wall clock time and date at job start Tue Mar 9 2021 13:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37875 * 126.45661 * 2 1 4 4 C 1.46675 * 126.23166 * 359.97438 * 3 2 1 5 5 O 1.21697 * 120.00336 * 359.72186 * 4 3 2 6 6 N 1.34782 * 119.99817 * 179.71905 * 4 3 2 7 7 C 1.46505 * 119.99899 * 180.02562 * 6 4 3 8 8 C 1.53006 * 109.45339 * 205.00264 * 7 6 4 9 9 C 1.53093 * 109.41514 * 179.57009 * 8 7 6 10 10 C 1.52472 * 109.51475 * 59.16745 * 9 8 7 11 11 C 1.52474 * 110.72922 * 301.23427 * 10 9 8 12 12 C 1.52997 * 109.45661 * 84.89977 * 7 6 4 13 13 N 1.46847 * 110.48837 * 63.98337 * 10 9 8 14 14 C 1.34668 * 106.42112 * 118.54997 * 13 10 9 15 15 O 1.21543 * 123.78851 * 180.02562 * 14 13 10 16 16 N 1.33873 * 112.42210 * 0.27168 * 14 13 10 17 17 C 1.46502 * 124.19491 * 179.69375 * 16 14 13 18 18 C 1.34918 * 111.60612 * 359.53839 * 16 14 13 19 19 O 1.21232 * 127.25172 * 180.17903 * 18 16 14 20 20 N 1.37649 * 107.53445 * 179.73872 * 3 2 1 21 21 C 1.35539 * 108.64382 * 0.25586 * 20 3 2 22 22 C 1.50700 * 125.56380 * 180.02562 * 21 20 3 23 23 O 1.42892 * 109.47075 * 65.00298 * 22 21 20 24 24 Si 1.86304 * 109.46817 * 185.00099 * 22 21 20 25 25 C 1.35455 * 108.86900 * 0.02562 * 21 20 3 26 26 H 1.09005 * 109.46914 * 90.00414 * 1 2 3 27 27 H 1.08997 * 109.47096 * 210.00232 * 1 2 3 28 28 H 1.09003 * 109.47035 * 330.00733 * 1 2 3 29 29 H 0.96995 * 120.00027 * 0.02562 * 6 4 3 30 30 H 1.09002 * 109.43659 * 324.94953 * 7 6 4 31 31 H 1.08997 * 109.48323 * 59.58078 * 8 7 6 32 32 H 1.09009 * 109.47470 * 299.54655 * 8 7 6 33 33 H 1.09004 * 109.45598 * 299.15996 * 9 8 7 34 34 H 1.08997 * 109.46417 * 179.18503 * 9 8 7 35 35 H 1.08996 * 109.46541 * 178.77246 * 11 10 9 36 36 H 1.09001 * 109.46604 * 298.74907 * 11 10 9 37 37 H 1.09002 * 109.47538 * 300.40881 * 12 7 6 38 38 H 1.09002 * 109.47941 * 60.43696 * 12 7 6 39 39 H 0.97003 * 126.78593 * 298.55196 * 13 10 9 40 40 H 1.09005 * 109.47023 * 0.02562 * 17 16 14 41 41 H 1.08992 * 109.47295 * 120.02653 * 17 16 14 42 42 H 1.09002 * 109.46914 * 240.02887 * 17 16 14 43 43 H 0.96997 * 125.68367 * 180.28011 * 20 3 2 44 44 H 1.08997 * 109.46965 * 305.00071 * 22 21 20 45 45 H 0.96705 * 113.99885 * 179.97438 * 23 22 21 46 46 H 1.48502 * 109.99835 * 178.67962 * 24 22 21 47 47 H 1.48493 * 110.00214 * 299.99795 * 24 22 21 48 48 H 1.07999 * 126.06619 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5092 -0.0005 5 8 0.7026 2.7766 -0.0061 6 7 2.8037 3.4999 0.0053 7 6 2.3677 4.8986 0.0053 8 6 3.4673 5.7751 -0.5980 9 6 3.0065 7.2350 -0.6074 10 6 2.7013 7.6819 0.8181 11 6 1.6212 6.8033 1.4395 12 6 2.0869 5.3449 1.4416 13 7 3.9198 7.6554 1.6371 14 6 4.1308 8.9208 2.0467 15 8 5.0642 9.2573 2.7487 16 7 3.1942 9.7656 1.5981 17 6 3.1698 11.2003 1.8937 18 6 2.2774 9.1325 0.8372 19 8 1.3140 9.6229 0.2887 20 7 3.6284 0.6626 0.0060 21 6 3.6218 -0.6928 0.0039 22 6 4.8434 -1.5752 0.0094 23 8 5.5561 -1.3945 1.2346 24 14 4.3230 -3.3570 -0.1494 25 6 2.3380 -1.1246 -0.0039 26 1 -0.3633 -0.0001 -1.0277 27 1 -0.3633 -0.8899 0.5139 28 1 -0.3633 0.8901 0.5137 29 1 3.7499 3.2869 0.0094 30 1 1.4592 4.9954 -0.5892 31 1 3.6710 5.4516 -1.6187 32 1 4.3739 5.6839 0.0003 33 1 2.1081 7.3283 -1.2175 34 1 3.7949 7.8620 -1.0237 35 1 1.4349 7.1264 2.4637 36 1 0.7031 6.8906 0.8586 37 1 1.3082 4.7152 1.8720 38 1 2.9969 5.2545 2.0348 39 1 4.4649 6.8798 1.8425 40 1 4.0217 11.4560 2.5239 41 1 3.2246 11.7641 0.9625 42 1 2.2451 11.4482 2.4148 43 1 4.4191 1.2244 0.0112 44 1 5.4878 -1.3088 -0.8285 45 1 6.3558 -1.9332 1.3076 46 1 5.5202 -4.2352 -0.1773 47 1 3.4441 -3.7326 0.9870 48 1 2.0137 -2.1548 -0.0069 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17849352_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:38 Heat of formation + Delta-G solvation = -59.894410 kcal Electronic energy + Delta-G solvation = -33326.681405 eV Core-core repulsion = 28770.722122 eV Total energy + Delta-G solvation = -4555.959283 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.167 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -43.84235 -42.57982 -40.73946 -39.73946 -39.09653 -37.95590 -36.97649 -36.02758 -34.22380 -33.40008 -32.36099 -31.89426 -30.28855 -28.90144 -28.16552 -26.87841 -25.08757 -24.38419 -23.69618 -22.27719 -21.73118 -21.58404 -21.25693 -20.29188 -19.45556 -19.02348 -18.77719 -17.94725 -17.83318 -17.34573 -16.90652 -16.66244 -16.56937 -16.41661 -16.08224 -15.92783 -15.70220 -15.22772 -15.16963 -14.92433 -14.89616 -14.58617 -14.39386 -14.16556 -14.01746 -13.86770 -13.64386 -13.60935 -13.56011 -13.50610 -13.28943 -13.17666 -13.07822 -12.61920 -12.44162 -12.11329 -12.00898 -11.91785 -11.86021 -11.23433 -10.98420 -10.89925 -10.74112 -10.61176 -10.28615 -9.81011 -9.15847 -5.02566 0.34171 0.48560 1.06532 1.10625 1.49855 1.53643 1.84371 1.88314 1.90614 1.94722 2.10098 2.34122 2.75613 3.07310 3.13962 3.20317 3.46178 3.64690 3.72225 3.74713 3.85635 3.89431 3.96180 3.99637 4.03111 4.15155 4.23748 4.26645 4.28100 4.35029 4.39084 4.50701 4.59293 4.60424 4.67577 4.70753 4.74888 4.77206 4.84595 4.93090 4.97617 5.03721 5.21061 5.26419 5.44889 5.62102 5.66219 5.90125 5.90679 6.16362 6.23089 6.25079 6.38772 7.01071 7.09267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.061 4.061 3 C -0.058 4.058 4 C 0.593 3.407 5 O -0.518 6.518 6 N -0.731 5.731 7 C 0.144 3.856 8 C -0.125 4.125 9 C -0.109 4.109 10 C 0.122 3.878 11 C -0.110 4.110 12 C -0.127 4.127 13 N -0.716 5.716 14 C 0.702 3.298 15 O -0.540 6.540 16 N -0.580 5.580 17 C 0.084 3.916 18 C 0.531 3.469 19 O -0.456 6.456 20 N -0.526 5.526 21 C 0.074 3.926 22 C -0.062 4.062 23 O -0.541 6.541 24 Si 0.713 3.287 25 C -0.197 4.197 26 H 0.071 0.929 27 H 0.065 0.935 28 H 0.081 0.919 29 H 0.394 0.606 30 H 0.100 0.900 31 H 0.085 0.915 32 H 0.071 0.929 33 H 0.097 0.903 34 H 0.083 0.917 35 H 0.080 0.920 36 H 0.096 0.904 37 H 0.084 0.916 38 H 0.067 0.933 39 H 0.439 0.561 40 H 0.098 0.902 41 H 0.079 0.921 42 H 0.079 0.921 43 H 0.415 0.585 44 H 0.077 0.923 45 H 0.384 0.616 46 H -0.259 1.259 47 H -0.250 1.250 48 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.280 -3.351 -3.874 6.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.070 4.070 3 C -0.170 4.170 4 C 0.382 3.618 5 O -0.393 6.393 6 N -0.382 5.382 7 C 0.040 3.960 8 C -0.163 4.163 9 C -0.148 4.148 10 C 0.032 3.968 11 C -0.149 4.149 12 C -0.166 4.166 13 N -0.381 5.381 14 C 0.403 3.597 15 O -0.413 6.413 16 N -0.327 5.327 17 C -0.057 4.057 18 C 0.317 3.683 19 O -0.324 6.324 20 N -0.122 5.122 21 C -0.043 4.043 22 C -0.171 4.171 23 O -0.349 6.349 24 Si 0.611 3.389 25 C -0.222 4.222 26 H 0.090 0.910 27 H 0.084 0.916 28 H 0.100 0.900 29 H 0.227 0.773 30 H 0.118 0.882 31 H 0.103 0.897 32 H 0.090 0.910 33 H 0.115 0.885 34 H 0.101 0.899 35 H 0.099 0.901 36 H 0.115 0.885 37 H 0.103 0.897 38 H 0.085 0.915 39 H 0.284 0.716 40 H 0.117 0.883 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.252 0.748 44 H 0.095 0.905 45 H 0.233 0.767 46 H -0.184 1.184 47 H -0.173 1.173 48 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.989 -2.794 -3.305 4.763 hybrid contribution 2.422 0.149 0.840 2.568 sum 4.411 -2.645 -2.465 5.703 Atomic orbital electron populations 1.20397 0.88745 1.03238 1.02634 1.19924 0.96067 0.90238 1.00767 1.20173 0.83450 0.93483 1.19934 1.17006 0.85845 0.82907 0.76076 1.90850 1.15791 1.83080 1.49600 1.45925 1.09289 1.06097 1.76900 1.21058 0.98866 0.79323 0.96781 1.21801 0.98073 0.93746 1.02645 1.21627 1.04082 0.96474 0.92634 1.21142 0.87273 0.94071 0.94359 1.21656 0.97059 0.93883 1.02340 1.21929 1.02660 0.95172 0.96839 1.45600 1.29022 1.09054 1.54473 1.15940 0.82071 0.81697 0.80013 1.91046 1.31468 1.79015 1.39761 1.46335 1.26408 1.11582 1.48412 1.21916 1.04859 0.75730 1.03168 1.20642 0.81900 0.88454 0.77314 1.90837 1.25386 1.73219 1.42916 1.41810 1.07135 1.06520 1.56738 1.19784 0.94978 0.82536 1.07035 1.24578 0.93062 1.10383 0.89055 1.86580 1.42447 1.68222 1.37638 0.94305 0.83079 0.71806 0.89662 1.20574 0.90618 0.99253 1.11709 0.91038 0.91639 0.90045 0.77306 0.88221 0.89684 0.91049 0.88454 0.89860 0.90090 0.88546 0.89748 0.91451 0.71606 0.88306 0.90209 0.90195 0.74774 0.90491 0.76681 1.18416 1.17344 0.83193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.13 9.83 36.01 0.35 0.22 16 2 C -0.06 -0.12 6.21 -104.16 -0.65 -0.77 16 3 C -0.06 -0.07 7.06 -81.98 -0.58 -0.65 16 4 C 0.59 0.74 7.75 -12.85 -0.10 0.64 16 5 O -0.52 -2.25 14.47 5.19 0.08 -2.17 16 6 N -0.73 1.72 5.07 -55.11 -0.28 1.44 16 7 C 0.14 -0.40 2.44 -67.93 -0.17 -0.56 16 8 C -0.12 0.58 5.28 -26.68 -0.14 0.44 16 9 C -0.11 0.37 4.98 -26.95 -0.13 0.24 16 10 C 0.12 -0.25 0.84 -133.11 -0.11 -0.36 16 11 C -0.11 0.24 4.98 -26.95 -0.13 0.11 16 12 C -0.13 0.32 5.38 -26.68 -0.14 0.17 16 13 N -0.72 1.32 5.23 -53.88 -0.28 1.04 16 14 C 0.70 1.05 8.63 -87.82 -0.76 0.29 16 15 O -0.54 -2.77 17.24 5.33 0.09 -2.67 16 16 N -0.58 -0.43 3.01 -128.24 -0.39 -0.81 16 17 C 0.08 -0.07 10.89 59.85 0.65 0.58 16 18 C 0.53 0.36 6.95 -10.71 -0.07 0.28 16 19 O -0.46 -1.48 17.86 5.60 0.10 -1.38 16 20 N -0.53 0.45 5.99 -5.69 -0.03 0.42 16 21 C 0.07 0.00 6.50 -81.95 -0.53 -0.54 16 22 C -0.06 0.12 3.07 36.01 0.11 0.23 16 23 O -0.54 0.46 12.86 -35.23 -0.45 0.01 16 24 Si 0.71 -1.67 30.56 -169.99 -5.19 -6.87 16 25 C -0.20 -0.15 9.27 -39.98 -0.37 -0.52 16 26 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 28 H 0.08 0.24 6.49 -51.93 -0.34 -0.10 16 29 H 0.39 -1.88 7.73 -40.82 -0.32 -2.19 16 30 H 0.10 -0.10 7.58 -51.93 -0.39 -0.49 16 31 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 32 H 0.07 -0.40 7.33 -51.92 -0.38 -0.78 16 33 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 34 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.07 -0.22 7.33 -51.93 -0.38 -0.60 16 39 H 0.44 -1.57 7.70 -40.82 -0.31 -1.89 16 40 H 0.10 -0.07 7.45 -51.93 -0.39 -0.46 16 41 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.41 -1.48 8.19 -40.82 -0.33 -1.82 16 44 H 0.08 -0.31 7.96 -51.93 -0.41 -0.72 16 45 H 0.38 -1.82 8.74 45.56 0.40 -1.42 16 46 H -0.26 0.14 7.11 56.52 0.40 0.54 16 47 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 48 H 0.15 -0.14 6.19 -52.49 -0.32 -0.46 16 LS Contribution 390.66 15.07 5.89 5.89 Total: 0.00 -11.50 390.66 -9.86 -21.35 By element: Atomic # 1 Polarization: -9.44 SS G_CDS: -6.61 Total: -16.05 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -2.77 Total: -0.18 kcal Atomic # 7 Polarization: 3.06 SS G_CDS: -0.98 Total: 2.08 kcal Atomic # 8 Polarization: -6.03 SS G_CDS: -0.19 Total: -6.22 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.19 Total: -6.87 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -11.50 -9.86 -21.35 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17849352_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.542 kcal (2) G-P(sol) polarization free energy of solvation -11.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.038 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.353 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds