Wall clock time and date at job start Tue Mar 9 2021 13:05:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 H 1.08990 * 109.47559 * 299.87026 * 3 2 1 5 5 C 1.53000 * 109.47276 * 59.87428 * 3 2 1 6 6 C 1.52999 * 109.47491 * 179.97438 * 5 3 2 7 7 C 1.52999 * 109.47019 * 299.99944 * 6 5 3 8 8 H 1.08998 * 109.47320 * 299.99893 * 7 6 5 9 9 C 1.52999 * 109.47181 * 179.97438 * 7 6 5 10 10 N 1.46496 * 109.46989 * 65.00024 * 9 7 6 11 11 C 1.34775 * 120.00078 * 179.97438 * 10 9 7 12 12 O 1.21284 * 120.00016 * 0.02562 * 11 10 9 13 13 C 1.50702 * 120.00117 * 179.97438 * 11 10 9 14 14 O 1.42902 * 109.47130 * 180.02562 * 13 11 10 15 15 C 1.35920 * 116.99942 * 180.02562 * 14 13 11 16 16 C 1.38790 * 120.05741 * 180.02562 * 15 14 13 17 17 Br 1.89099 * 120.03730 * 359.97438 * 16 15 14 18 18 C 1.38238 * 119.92515 * 179.97438 * 16 15 14 19 19 C 1.38242 * 120.04715 * 0.02562 * 18 16 15 20 20 C 1.50700 * 119.93945 * 179.97438 * 19 18 16 21 21 O 1.42898 * 109.47652 * 64.99632 * 20 19 18 22 22 Si 1.86298 * 109.46951 * 184.99682 * 20 19 18 23 23 C 1.38281 * 120.11666 * 359.67304 * 19 18 16 24 24 C 1.38142 * 120.07304 * 0.61002 * 23 19 18 25 25 C 1.53001 * 109.47272 * 59.99533 * 7 6 5 26 26 C 1.52999 * 109.47480 * 300.00185 * 25 7 6 27 27 H 4.18740 * 15.03937 * 359.97438 * 4 2 1 28 28 H 1.09001 * 109.46968 * 300.00040 * 5 3 2 29 29 H 1.09006 * 109.47122 * 59.99039 * 5 3 2 30 30 H 1.08998 * 109.46940 * 179.97438 * 6 5 3 31 31 H 1.09003 * 109.46906 * 59.99581 * 6 5 3 32 32 H 1.08998 * 109.47199 * 305.00178 * 9 7 6 33 33 H 1.09003 * 109.47089 * 184.99732 * 9 7 6 34 34 H 0.97003 * 119.99986 * 0.02562 * 10 9 7 35 35 H 1.08998 * 109.46772 * 60.00436 * 13 11 10 36 36 H 1.08995 * 109.47338 * 300.00473 * 13 11 10 37 37 H 1.07997 * 119.97426 * 180.02562 * 18 16 15 38 38 H 1.09001 * 109.47287 * 304.99495 * 20 19 18 39 39 H 0.96708 * 113.99562 * 59.99617 * 21 20 19 40 40 H 1.48503 * 110.00004 * 58.68151 * 22 20 19 41 41 H 1.48502 * 110.00033 * 179.97438 * 22 20 19 42 42 H 1.08005 * 119.96487 * 180.32416 * 23 19 18 43 43 H 1.08002 * 120.02746 * 179.69774 * 24 23 19 44 44 H 1.09003 * 109.47069 * 60.00108 * 25 7 6 45 45 H 1.08998 * 109.47561 * 180.02562 * 25 7 6 46 46 H 1.08993 * 109.47622 * 179.97438 * 26 25 7 47 47 H 1.09003 * 109.46906 * 300.00022 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0096 -0.5109 0.8910 5 6 3.1563 -0.7231 -1.2476 6 6 4.6863 -0.7219 -1.2480 7 6 5.1952 0.7210 -1.2515 8 1 4.8312 1.2325 -2.1426 9 6 6.7252 0.7223 -1.2513 10 7 7.2141 0.1358 -2.5015 11 6 8.5393 0.0327 -2.7245 12 8 9.3270 0.4251 -1.8898 13 6 9.0424 -0.5711 -4.0103 14 8 10.4714 -0.5698 -4.0102 15 6 11.0890 -1.0838 -5.1064 16 6 12.4750 -1.1145 -5.1730 17 35 13.5067 -0.4405 -3.7388 18 6 13.1003 -1.6384 -6.2890 19 6 12.3462 -2.1307 -7.3379 20 6 13.0305 -2.7007 -8.5536 21 8 13.7546 -3.8763 -8.1854 22 14 11.7533 -3.1350 -9.8385 23 6 10.9653 -2.1067 -7.2708 24 6 10.3352 -1.5790 -6.1604 25 6 4.6848 1.4449 -0.0039 26 6 3.1548 1.4436 -0.0036 27 1 -1.0500 0.0001 0.0008 28 1 2.7935 -1.7509 -1.2454 29 1 2.7926 -0.2115 -2.1388 30 1 5.0498 -1.2379 -2.1366 31 1 5.0503 -1.2333 -0.3568 32 1 7.0888 0.1352 -0.4079 33 1 7.0876 1.7466 -1.1642 34 1 6.5841 -0.1776 -3.1692 35 1 8.6783 0.0154 -4.8539 36 1 8.6803 -1.5955 -4.0968 37 1 14.1787 -1.6630 -6.3415 38 1 13.7203 -1.9622 -8.9621 39 1 13.2026 -4.5778 -7.8134 40 1 10.9721 -1.9269 -10.2067 41 1 12.4154 -3.6976 -11.0428 42 1 10.3785 -2.4967 -8.0894 43 1 9.2566 -1.5562 -6.1109 44 1 5.0487 0.9334 0.8872 45 1 5.0469 2.4729 -0.0066 46 1 2.7912 1.9589 0.8854 47 1 2.7909 1.9551 -0.8947 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17850112_6201210.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:45 Heat of formation + Delta-G solvation = -28.591270 kcal Electronic energy + Delta-G solvation = -28802.997630 eV Core-core repulsion = 24579.075294 eV Total energy + Delta-G solvation = -4223.922336 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.077 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.67020 -40.80717 -39.85675 -39.03275 -37.21454 -36.33006 -34.24737 -33.59652 -32.01970 -31.77550 -31.61922 -30.48546 -29.59697 -26.85392 -26.13398 -24.03450 -23.65970 -22.80681 -22.34744 -21.64590 -20.78395 -19.56046 -19.01245 -18.55880 -18.11054 -17.52728 -17.13177 -16.91007 -16.41084 -16.31943 -16.01904 -15.81809 -15.62410 -15.48129 -15.16118 -15.07468 -14.79290 -14.67664 -14.42660 -14.06246 -13.83016 -13.76810 -13.66805 -13.55650 -13.18797 -13.10573 -12.41554 -12.34602 -12.17375 -12.12207 -12.06403 -11.90875 -11.83578 -11.66653 -11.54156 -11.48114 -11.22861 -11.00165 -10.90135 -10.76127 -10.41837 -10.16028 -9.96949 -9.31529 -4.97527 -0.04737 0.12516 0.64675 1.34459 1.45150 1.49364 1.67653 1.88466 1.90741 2.02915 2.40415 2.54967 3.36223 3.49186 3.51711 3.67230 3.72647 3.76924 3.79048 3.80236 3.86488 4.05037 4.10012 4.12876 4.16695 4.30543 4.33724 4.39550 4.48096 4.48891 4.51415 4.56599 4.64952 4.69283 4.76364 4.85458 4.88183 4.97319 5.00978 5.13899 5.16831 5.22752 5.23808 5.24354 5.30619 5.34645 5.40198 5.49375 5.55183 6.07914 6.48104 6.70737 6.80155 7.17001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.208 4.208 3 C 0.016 3.984 4 H 0.092 0.908 5 C -0.105 4.105 6 C -0.111 4.111 7 C -0.088 4.088 8 H 0.092 0.908 9 C 0.127 3.873 10 N -0.707 5.707 11 C 0.510 3.490 12 O -0.572 6.572 13 C 0.032 3.968 14 O -0.306 6.306 15 C 0.149 3.851 16 C -0.145 4.145 17 Br -0.056 7.056 18 C -0.037 4.037 19 C -0.154 4.154 20 C -0.076 4.076 21 O -0.558 6.558 22 Si 0.789 3.211 23 C -0.052 4.052 24 C -0.188 4.188 25 C -0.111 4.111 26 C -0.104 4.104 27 H 0.236 0.764 28 H 0.066 0.934 29 H 0.069 0.931 30 H 0.084 0.916 31 H 0.065 0.935 32 H 0.059 0.941 33 H 0.058 0.942 34 H 0.421 0.579 35 H 0.131 0.869 36 H 0.135 0.865 37 H 0.134 0.866 38 H 0.103 0.897 39 H 0.396 0.604 40 H -0.277 1.277 41 H -0.305 1.305 42 H 0.168 0.832 43 H 0.182 0.818 44 H 0.069 0.931 45 H 0.072 0.928 46 H 0.062 0.938 47 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.622 -3.793 -4.386 11.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C -0.208 4.208 3 C -0.002 4.002 4 H 0.110 0.890 5 C -0.142 4.142 6 C -0.148 4.148 7 C -0.107 4.107 8 H 0.110 0.890 9 C 0.003 3.997 10 N -0.362 5.362 11 C 0.296 3.704 12 O -0.451 6.451 13 C -0.046 4.046 14 O -0.218 6.218 15 C 0.101 3.899 16 C -0.225 4.225 17 Br 0.029 6.971 18 C -0.056 4.056 19 C -0.155 4.155 20 C -0.185 4.185 21 O -0.366 6.366 22 Si 0.694 3.306 23 C -0.070 4.070 24 C -0.207 4.207 25 C -0.149 4.149 26 C -0.142 4.142 27 H 0.252 0.748 28 H 0.084 0.916 29 H 0.088 0.912 30 H 0.103 0.897 31 H 0.083 0.917 32 H 0.077 0.923 33 H 0.076 0.924 34 H 0.259 0.741 35 H 0.148 0.852 36 H 0.152 0.848 37 H 0.152 0.848 38 H 0.121 0.879 39 H 0.246 0.754 40 H -0.203 1.203 41 H -0.233 1.233 42 H 0.185 0.815 43 H 0.199 0.801 44 H 0.087 0.913 45 H 0.091 0.909 46 H 0.081 0.919 47 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -8.383 -2.673 -4.061 9.690 hybrid contribution -0.008 0.408 0.030 0.409 sum -8.390 -2.265 -4.031 9.580 Atomic orbital electron populations 1.25674 0.97000 1.00315 1.00544 1.23704 0.95351 1.00925 1.00853 1.18485 0.83392 0.97900 1.00459 0.89048 1.21503 0.95867 1.00364 0.96495 1.21616 0.94200 0.95616 1.03413 1.21351 0.91881 0.97351 1.00079 0.88979 1.21393 0.94283 0.98184 0.85817 1.45673 1.05730 1.63141 1.21663 1.20530 0.83008 0.78732 0.88180 1.90796 1.56667 1.49531 1.48061 1.22881 0.79162 1.05350 0.97175 1.86253 1.21209 1.76900 1.37487 1.18817 0.90539 0.93353 0.87219 1.21279 0.92084 1.11919 0.97253 1.96759 1.69786 1.86043 1.44491 1.20874 1.00653 0.93690 0.90428 1.20373 0.94403 1.03572 0.97158 1.25286 1.03553 0.89338 1.00350 1.86492 1.38986 1.25998 1.85162 0.93812 0.78563 0.83097 0.75118 1.21260 0.92992 0.95069 0.97676 1.21588 1.02173 1.03872 0.93099 1.21501 0.94448 1.01188 0.97797 1.21481 0.95573 0.94559 1.02573 0.74757 0.91562 0.91214 0.89710 0.91655 0.92288 0.92398 0.74111 0.85168 0.84760 0.84802 0.87919 0.75400 1.20313 1.23348 0.81482 0.80083 0.91270 0.90909 0.91930 0.91454 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -0.23 19.25 74.32 1.43 1.20 16 2 C -0.21 -0.39 12.56 31.13 0.39 0.00 16 3 C 0.02 -0.04 2.57 -12.60 -0.03 -0.08 16 4 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 5 C -0.10 0.64 5.16 30.59 0.16 0.80 16 6 C -0.11 1.00 5.08 30.59 0.16 1.15 16 7 C -0.09 0.73 2.23 -10.79 -0.02 0.70 16 8 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 9 C 0.13 -0.52 5.06 86.38 0.44 -0.09 16 10 N -0.71 4.71 5.28 -463.06 -2.45 2.26 16 11 C 0.51 0.38 7.91 87.66 0.69 1.07 16 12 O -0.57 -7.74 16.50 16.00 0.26 -7.48 16 13 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 14 O -0.31 -1.27 9.01 -73.61 -0.66 -1.93 16 15 C 0.15 0.26 6.68 22.52 0.15 0.41 16 16 C -0.15 -0.81 6.24 22.40 0.14 -0.67 16 17 Br -0.06 -0.55 33.16 -20.37 -0.68 -1.22 16 18 C -0.04 -0.11 9.42 22.27 0.21 0.10 16 19 C -0.15 0.31 5.35 -19.85 -0.11 0.20 16 20 C -0.08 0.19 2.80 71.24 0.20 0.39 16 21 O -0.56 0.51 12.83 -148.98 -1.91 -1.40 16 22 Si 0.79 -4.63 29.80 68.60 2.04 -2.59 16 23 C -0.05 0.36 8.66 22.26 0.19 0.55 16 24 C -0.19 1.21 9.04 22.36 0.20 1.41 16 25 C -0.11 0.67 5.20 30.59 0.16 0.83 16 26 C -0.10 0.42 5.16 30.60 0.16 0.58 16 27 H 0.24 -1.17 7.80 -4.42 -0.03 -1.20 16 28 H 0.07 -0.35 8.14 -2.39 -0.02 -0.36 16 29 H 0.07 -0.43 8.14 -2.38 -0.02 -0.45 16 30 H 0.08 -1.05 7.18 -2.39 -0.02 -1.06 16 31 H 0.06 -0.47 8.14 -2.39 -0.02 -0.49 16 32 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 33 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.42 -6.09 7.66 -92.71 -0.71 -6.80 16 35 H 0.13 -1.70 7.66 -2.39 -0.02 -1.72 16 36 H 0.13 -1.84 7.66 -2.39 -0.02 -1.86 16 37 H 0.13 0.49 8.06 -2.91 -0.02 0.46 16 38 H 0.10 -0.05 7.96 -2.39 -0.02 -0.07 16 39 H 0.40 -3.72 8.70 -74.05 -0.64 -4.37 16 40 H -0.28 0.65 7.11 99.48 0.71 1.36 16 41 H -0.31 -0.90 7.11 99.48 0.71 -0.19 16 42 H 0.17 -2.23 4.91 -2.91 -0.01 -2.24 16 43 H 0.18 -2.74 6.30 -2.91 -0.02 -2.75 16 44 H 0.07 -0.38 8.14 -2.39 -0.02 -0.39 16 45 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 46 H 0.06 -0.16 8.14 -2.39 -0.02 -0.17 16 47 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 Total: 0.00 -29.18 407.81 1.18 -28.00 By element: Atomic # 1 Polarization: -24.07 SS G_CDS: -0.32 Total: -24.39 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: 4.89 Total: 8.75 kcal Atomic # 7 Polarization: 4.71 SS G_CDS: -2.45 Total: 2.26 kcal Atomic # 8 Polarization: -8.50 SS G_CDS: -2.31 Total: -10.81 kcal Atomic # 14 Polarization: -4.63 SS G_CDS: 2.04 Total: -2.59 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.22 kcal Total: -29.18 1.18 -28.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_6201210.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.592 kcal (2) G-P(sol) polarization free energy of solvation -29.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.999 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds