Wall clock time and date at job start Tue Mar 9 2021 13:05:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17404 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 H 1.09000 * 109.46951 * 237.90778 * 3 2 1 5 5 C 1.52995 * 109.47280 * 357.91267 * 3 2 1 6 6 C 1.53000 * 109.46924 * 180.02562 * 5 3 2 7 7 C 1.53005 * 109.46846 * 299.99498 * 6 5 3 8 8 H 1.09000 * 109.47224 * 300.00064 * 7 6 5 9 9 C 1.53000 * 109.46810 * 180.02562 * 7 6 5 10 10 N 1.46494 * 109.46984 * 175.00495 * 9 7 6 11 11 C 1.34784 * 120.00153 * 180.02562 * 10 9 7 12 12 O 1.21634 * 119.99423 * 359.97438 * 11 10 9 13 13 C 1.47183 * 120.00149 * 179.97438 * 11 10 9 14 14 C 1.36011 * 123.46047 * 0.02562 * 13 11 10 15 15 S 1.70448 * 110.81640 * 179.97438 * 14 13 11 16 16 C 1.75506 * 92.44768 * 0.02562 * 15 14 13 17 17 C 1.50690 * 124.71452 * 179.97438 * 16 15 14 18 18 O 1.42906 * 109.47230 * 245.02684 * 17 16 15 19 19 Si 1.86298 * 109.47170 * 5.02319 * 17 16 15 20 20 C 1.32772 * 110.57234 * 359.97438 * 16 15 14 21 21 C 1.52995 * 109.46949 * 60.00517 * 7 6 5 22 22 C 1.52996 * 109.46699 * 117.91381 * 3 2 1 23 23 H 4.18742 * 15.03925 * 0.02562 * 4 2 1 24 24 H 1.09000 * 109.47527 * 59.99865 * 5 3 2 25 25 H 1.09001 * 109.47147 * 300.00046 * 5 3 2 26 26 H 1.08999 * 109.46951 * 179.97438 * 6 5 3 27 27 H 1.08992 * 109.47406 * 59.99863 * 6 5 3 28 28 H 1.08998 * 109.47369 * 54.99938 * 9 7 6 29 29 H 1.09005 * 109.46724 * 294.99968 * 9 7 6 30 30 H 0.96999 * 120.00433 * 359.97438 * 10 9 7 31 31 H 1.08000 * 124.59655 * 359.94245 * 14 13 11 32 32 H 1.08997 * 109.47327 * 125.02201 * 17 16 15 33 33 H 0.96692 * 113.99876 * 180.02562 * 18 17 16 34 34 H 1.48506 * 110.00243 * 178.68272 * 19 17 16 35 35 H 1.48495 * 110.00150 * 300.00153 * 19 17 16 36 36 H 1.07996 * 123.45849 * 180.02562 * 20 16 15 37 37 H 1.09000 * 109.47527 * 59.99733 * 21 7 6 38 38 H 1.09001 * 109.47147 * 179.97438 * 21 7 6 39 39 H 1.09003 * 109.47416 * 299.99277 * 22 3 2 40 40 H 1.08999 * 109.47405 * 59.99860 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0091 0.5468 0.8706 5 6 3.1567 -1.4406 0.0525 6 6 4.6867 -1.4398 0.0532 7 6 5.1968 -0.7641 -1.2213 8 1 4.8341 -1.3102 -2.0922 9 6 6.7268 -0.7639 -1.2210 10 7 7.2153 -0.2257 -2.4929 11 6 8.5405 -0.1300 -2.7197 12 8 9.3307 -0.4901 -1.8680 13 6 9.0313 0.4101 -3.9978 14 6 8.2116 0.8333 -4.9973 15 16 9.1179 1.3957 -6.3268 16 6 10.6428 1.0561 -5.5270 17 6 12.0017 1.3089 -6.1273 18 8 12.6762 0.0639 -6.3205 19 14 11.8055 2.1699 -7.7677 20 6 10.4328 0.5455 -4.3195 21 6 4.6862 0.6771 -1.2738 22 6 3.1556 0.6762 -1.2747 23 1 -1.0500 -0.0007 -0.0002 24 1 2.7937 -1.9867 -0.8181 25 1 2.7936 -1.9219 0.9606 26 1 5.0505 -2.4666 0.0911 27 1 5.0494 -0.8939 0.9240 28 1 7.0903 -1.7837 -1.0943 29 1 7.0898 -0.1443 -0.4009 30 1 6.5852 0.0611 -3.1722 31 1 7.1326 0.8149 -4.9546 32 1 12.5849 1.9375 -5.4545 33 1 13.5594 0.1506 -6.7044 34 1 13.1395 2.4534 -8.3553 35 1 11.0120 1.3231 -8.6941 36 1 11.2282 0.2607 -3.6468 37 1 5.0489 1.2231 -0.4030 38 1 5.0499 1.1586 -2.1816 39 1 2.7926 0.1301 -2.1454 40 1 2.7918 1.7030 -1.3121 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17850112_6894386.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:59 Heat of formation + Delta-G solvation = 1.648302 kcal Electronic energy + Delta-G solvation = -21828.781022 eV Core-core repulsion = 18509.360033 eV Total energy + Delta-G solvation = -3319.420989 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.108 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.04768 -39.96920 -38.69051 -37.23765 -36.27372 -34.22905 -32.24343 -31.91487 -31.15298 -27.44045 -26.91583 -25.10033 -23.82349 -22.82405 -21.78510 -21.06874 -20.26517 -19.06836 -18.84010 -18.53757 -18.01194 -16.71870 -16.57146 -16.30529 -16.04795 -15.73134 -15.58368 -15.29606 -15.03762 -14.73090 -14.17990 -14.05385 -13.90404 -13.79641 -13.77428 -13.48694 -13.30553 -13.16383 -12.72108 -12.49156 -12.39613 -12.23151 -11.97834 -11.72512 -11.68133 -11.57373 -10.96428 -10.86278 -10.81591 -10.62260 -10.10840 -9.94367 -9.45874 -5.14311 -0.32882 0.34677 0.70707 0.94387 1.16986 1.50414 1.82915 1.91781 1.94756 2.15982 2.42655 3.21084 3.27227 3.57196 3.59492 3.63067 3.69008 3.86570 4.00330 4.06217 4.16781 4.26394 4.29874 4.32813 4.33926 4.36103 4.40601 4.58860 4.66651 4.74610 4.77651 4.86495 4.96379 5.03711 5.05676 5.07758 5.10779 5.20613 5.22935 5.25285 5.35114 5.44769 6.33145 6.48191 6.73041 7.26022 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.186 4.186 3 C 0.020 3.980 4 H 0.092 0.908 5 C -0.109 4.109 6 C -0.112 4.112 7 C -0.101 4.101 8 H 0.079 0.921 9 C 0.124 3.876 10 N -0.726 5.726 11 C 0.577 3.423 12 O -0.532 6.532 13 C -0.154 4.154 14 C -0.209 4.209 15 S 0.205 5.795 16 C -0.197 4.197 17 C -0.035 4.035 18 O -0.532 6.532 19 Si 0.646 3.354 20 C -0.054 4.054 21 C -0.115 4.115 22 C -0.110 4.110 23 H 0.217 0.783 24 H 0.068 0.932 25 H 0.070 0.930 26 H 0.072 0.928 27 H 0.070 0.930 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.398 0.602 31 H 0.171 0.829 32 H 0.087 0.913 33 H 0.383 0.617 34 H -0.238 1.238 35 H -0.234 1.234 36 H 0.155 0.845 37 H 0.070 0.930 38 H 0.065 0.935 39 H 0.067 0.933 40 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.507 3.635 -2.372 5.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C -0.186 4.186 3 C 0.002 3.998 4 H 0.110 0.890 5 C -0.147 4.147 6 C -0.150 4.150 7 C -0.120 4.120 8 H 0.098 0.902 9 C 0.000 4.000 10 N -0.378 5.378 11 C 0.363 3.637 12 O -0.410 6.410 13 C -0.172 4.172 14 C -0.347 4.347 15 S 0.471 5.529 16 C -0.314 4.314 17 C -0.147 4.147 18 O -0.340 6.340 19 Si 0.544 3.456 20 C -0.083 4.083 21 C -0.153 4.153 22 C -0.148 4.148 23 H 0.233 0.767 24 H 0.086 0.914 25 H 0.088 0.912 26 H 0.091 0.909 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.233 0.767 31 H 0.189 0.811 32 H 0.105 0.895 33 H 0.231 0.769 34 H -0.161 1.161 35 H -0.158 1.158 36 H 0.173 0.827 37 H 0.089 0.911 38 H 0.084 0.916 39 H 0.086 0.914 40 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -2.711 3.703 -3.775 5.943 hybrid contribution 0.608 -1.211 1.199 1.809 sum -2.103 2.492 -2.576 4.156 Atomic orbital electron populations 1.24982 0.96018 1.00542 1.00726 1.23069 0.94311 1.00624 1.00565 1.18354 0.84306 0.97569 0.99566 0.88983 1.21538 0.95170 0.95018 1.02950 1.21510 0.95055 1.01260 0.97141 1.21460 0.93571 0.97157 0.99803 0.90215 1.21455 0.93196 0.99764 0.85548 1.45843 1.06682 1.65964 1.19319 1.17592 0.82141 0.77968 0.85995 1.90824 1.55309 1.48737 1.46091 1.20215 0.93434 1.07794 0.95763 1.25780 1.04709 1.04984 0.99238 1.83091 0.94559 1.59327 1.15898 1.23521 0.97671 1.11379 0.98785 1.24033 0.90547 0.90751 1.09331 1.86618 1.33890 1.28404 1.85047 0.95321 0.86518 0.87060 0.76692 1.21029 0.94977 0.96748 0.95569 1.21642 0.95018 0.95923 1.02701 1.21560 0.95257 1.01006 0.96932 0.76654 0.91374 0.91173 0.90950 0.91080 0.91054 0.90979 0.76652 0.81122 0.89494 0.76855 1.16096 1.15768 0.82707 0.91129 0.91589 0.91414 0.91297 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -0.20 19.25 29.55 0.57 0.37 16 2 C -0.19 -0.25 12.56 -37.12 -0.47 -0.72 16 3 C 0.02 -0.02 2.56 -93.41 -0.24 -0.25 16 4 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 5 C -0.11 0.15 5.16 -26.73 -0.14 0.02 16 6 C -0.11 0.25 5.20 -26.73 -0.14 0.11 16 7 C -0.10 0.25 2.22 -90.62 -0.20 0.05 16 8 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 9 C 0.12 -0.07 5.07 -4.04 -0.02 -0.09 16 10 N -0.73 0.21 5.25 -61.46 -0.32 -0.12 16 11 C 0.58 1.81 7.79 -12.63 -0.10 1.71 16 12 O -0.53 -3.82 16.80 5.25 0.09 -3.73 16 13 C -0.15 -0.28 5.98 -104.63 -0.63 -0.91 16 14 C -0.21 0.19 10.38 29.93 0.31 0.50 16 15 S 0.20 -0.16 20.20 -107.50 -2.17 -2.34 16 16 C -0.20 -0.22 5.69 -36.19 -0.21 -0.42 16 17 C -0.03 0.01 2.93 36.00 0.11 0.11 16 18 O -0.53 -0.58 12.86 -35.23 -0.45 -1.03 16 19 Si 0.65 -0.89 30.92 -169.99 -5.26 -6.14 16 20 C -0.05 -0.14 9.95 -39.02 -0.39 -0.53 16 21 C -0.12 0.31 5.08 -26.70 -0.14 0.18 16 22 C -0.11 0.20 5.16 -26.70 -0.14 0.06 16 23 H 0.22 -0.41 7.80 -54.09 -0.42 -0.84 16 24 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 25 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 28 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.40 -1.17 6.15 -40.82 -0.25 -1.42 16 31 H 0.17 -0.69 7.01 -52.49 -0.37 -1.06 16 32 H 0.09 -0.17 7.96 -51.93 -0.41 -0.59 16 33 H 0.38 -1.20 8.74 45.56 0.40 -0.80 16 34 H -0.24 -0.04 7.11 56.52 0.40 0.36 16 35 H -0.23 -0.30 7.11 56.52 0.40 0.10 16 36 H 0.16 0.51 8.06 -52.49 -0.42 0.09 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.07 -0.22 7.18 -51.93 -0.37 -0.60 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 347.70 15.07 5.24 5.24 Total: 0.00 -8.05 347.70 -10.39 -18.44 By element: Atomic # 1 Polarization: -4.80 SS G_CDS: -5.70 Total: -10.50 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -1.81 Total: 0.19 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.32 Total: -0.12 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -0.36 Total: -4.77 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.26 Total: -6.14 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -2.17 Total: -2.34 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -8.05 -10.39 -18.44 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17850112_6894386.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.084 kcal (2) G-P(sol) polarization free energy of solvation -8.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.436 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds