Wall clock time and date at job start Tue Mar 9 2021 13:12:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35534 * 125.67816 * 2 1 4 4 C 1.35450 * 108.87270 * 180.28290 * 3 2 1 5 5 C 1.50701 * 126.06836 * 179.71216 * 4 3 2 6 6 O 1.42891 * 109.47488 * 245.03117 * 5 4 3 7 7 Si 1.86302 * 109.46976 * 5.03209 * 5 4 3 8 8 C 1.39840 * 107.86385 * 359.58238 * 4 3 2 9 9 C 1.37645 * 125.67658 * 180.02562 * 2 1 3 10 10 C 1.46672 * 126.23619 * 0.02562 * 9 2 1 11 11 O 1.21694 * 119.99931 * 5.67995 * 10 9 2 12 12 N 1.34783 * 120.00250 * 185.68528 * 10 9 2 13 13 C 1.46496 * 120.00183 * 185.11465 * 12 10 9 14 14 H 1.09007 * 112.84802 * 336.19341 * 13 12 10 15 15 C 1.53780 * 113.61414 * 107.49955 * 13 12 10 16 16 C 1.53787 * 87.08016 * 139.98355 * 15 13 12 17 17 H 1.09001 * 113.69351 * 89.12583 * 16 15 13 18 18 C 1.50697 * 113.61424 * 220.02100 * 16 15 13 19 19 N 1.30177 * 126.80218 * 192.18132 * 18 16 15 20 20 O 1.20926 * 111.60209 * 179.79543 * 19 18 16 21 21 C 1.34032 * 111.56680 * 0.48825 * 20 19 18 22 22 C 1.35451 * 106.44874 * 359.70542 * 21 20 19 23 23 C 1.53781 * 113.61479 * 204.99820 * 13 12 10 24 24 H 1.08995 * 109.47545 * 86.00965 * 1 2 3 25 25 H 1.09006 * 109.47513 * 206.01389 * 1 2 3 26 26 H 1.09009 * 109.47226 * 326.01316 * 1 2 3 27 27 H 1.07999 * 125.56192 * 0.02562 * 3 2 1 28 28 H 1.09003 * 109.46580 * 125.02784 * 5 4 3 29 29 H 0.96701 * 114.00090 * 60.00057 * 6 5 4 30 30 H 1.48499 * 109.99990 * 179.97438 * 7 5 4 31 31 H 1.48496 * 109.99908 * 301.31419 * 7 5 4 32 32 H 1.07996 * 126.45726 * 180.11843 * 8 4 3 33 33 H 0.96996 * 119.99620 * 5.11631 * 12 10 9 34 34 H 1.09000 * 113.61204 * 254.52658 * 15 13 12 35 35 H 1.08995 * 113.61442 * 25.43871 * 15 13 12 36 36 H 1.08004 * 126.77487 * 179.73103 * 21 20 19 37 37 H 1.08000 * 128.00759 * 179.97438 * 22 21 20 38 38 H 1.08994 * 113.61556 * 334.56797 * 23 13 12 39 39 H 1.09005 * 113.61158 * 105.38827 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7093 -0.0063 5 6 4.7536 1.6189 -0.0146 6 8 5.4700 1.4507 -1.2395 7 14 4.1934 3.3891 0.1391 8 6 3.5779 -0.6888 -0.0008 9 6 2.2677 -1.1181 -0.0005 10 6 1.8124 -2.5124 -0.0017 11 8 0.6266 -2.7651 -0.1066 12 7 2.7072 -3.5137 0.1136 13 6 2.2668 -4.9063 0.0002 14 1 1.2104 -5.0367 0.2356 15 6 2.6953 -5.5829 -1.3126 16 6 2.9822 -6.8424 -0.4781 17 1 2.1222 -7.5040 -0.3738 18 6 4.2338 -7.5707 -0.8951 19 7 4.6016 -8.7636 -0.5258 20 8 5.6540 -9.0810 -1.0299 21 6 6.1387 -8.1072 -1.8130 22 6 5.2442 -7.0915 -1.7601 23 6 3.1868 -5.9042 0.7231 24 1 -0.3634 0.0715 -1.0251 25 1 -0.3634 -0.9236 0.4507 26 1 -0.3634 0.8522 0.5745 27 1 1.9081 2.1236 0.0004 28 1 5.4038 1.3695 0.8239 29 1 4.9516 1.6556 -2.0297 30 1 5.3691 4.2962 0.1327 31 1 3.2807 3.7320 -0.9810 32 1 4.4583 -1.3144 -0.0018 33 1 3.6427 -3.3122 0.2717 34 1 1.8804 -5.7079 -2.0256 35 1 3.5867 -5.1431 -1.7597 36 1 7.0604 -8.1285 -2.3755 37 1 5.2920 -6.1364 -2.2620 38 1 4.2125 -5.5521 0.8325 39 1 2.7692 -6.2874 1.6542 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18339242_10803934.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:12 Heat of formation + Delta-G solvation = 78.730594 kcal Electronic energy + Delta-G solvation = -24148.821333 eV Core-core repulsion = 20449.594241 eV Total energy + Delta-G solvation = -3699.227092 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.126 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -45.89308 -42.55769 -40.96795 -39.31237 -37.80211 -35.47923 -34.25079 -33.58934 -32.57852 -30.87583 -28.36358 -27.02456 -26.85411 -25.65570 -24.28701 -23.66878 -22.04614 -21.27138 -21.02936 -20.21343 -18.83202 -18.78396 -18.48174 -17.83277 -17.30650 -16.82294 -16.66743 -16.36405 -15.90465 -15.84225 -15.50106 -15.30329 -15.00582 -14.49447 -14.35213 -14.01586 -13.88632 -13.65571 -13.46116 -13.41176 -13.24630 -13.12876 -12.81343 -12.42880 -12.39965 -11.94972 -11.77815 -11.74298 -11.16739 -10.88095 -10.56336 -10.44160 -10.19194 -9.70115 -9.26945 -4.84351 0.39682 0.62048 1.27948 1.40540 1.55810 1.59026 1.68463 2.05109 2.25728 2.30490 2.48124 3.13230 3.29703 3.52474 3.56590 3.61762 3.75411 3.84966 3.87666 4.00293 4.03558 4.23799 4.29733 4.36628 4.40782 4.46637 4.58191 4.65210 4.71638 4.72638 4.74420 4.76224 4.80617 4.89020 4.94409 5.11891 5.17209 5.21015 5.45703 5.68352 5.89503 6.16390 6.44950 6.62425 7.09622 7.35392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.412 5.412 3 C 0.033 3.967 4 C -0.215 4.215 5 C -0.044 4.044 6 O -0.552 6.552 7 Si 0.765 3.235 8 C -0.110 4.110 9 C -0.079 4.079 10 C 0.588 3.412 11 O -0.583 6.583 12 N -0.695 5.695 13 C 0.128 3.872 14 H 0.107 0.893 15 C -0.130 4.130 16 C -0.037 4.037 17 H 0.106 0.894 18 C 0.021 3.979 19 N -0.405 5.405 20 O 0.079 5.921 21 C -0.047 4.047 22 C -0.241 4.241 23 C -0.121 4.121 24 H 0.080 0.920 25 H 0.086 0.914 26 H 0.113 0.887 27 H 0.197 0.803 28 H 0.120 0.880 29 H 0.383 0.617 30 H -0.309 1.309 31 H -0.280 1.280 32 H 0.159 0.841 33 H 0.416 0.584 34 H 0.076 0.924 35 H 0.106 0.894 36 H 0.256 0.744 37 H 0.194 0.806 38 H 0.101 0.899 39 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.627 3.802 0.022 4.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.084 5.084 3 C -0.104 4.104 4 C -0.221 4.221 5 C -0.154 4.154 6 O -0.359 6.359 7 Si 0.671 3.329 8 C -0.136 4.136 9 C -0.191 4.191 10 C 0.378 3.622 11 O -0.465 6.465 12 N -0.345 5.345 13 C 0.023 3.977 14 H 0.125 0.875 15 C -0.169 4.169 16 C -0.057 4.057 17 H 0.124 0.876 18 C -0.138 4.138 19 N -0.112 5.112 20 O 0.015 5.985 21 C -0.127 4.127 22 C -0.262 4.262 23 C -0.160 4.160 24 H 0.099 0.901 25 H 0.105 0.895 26 H 0.132 0.868 27 H 0.214 0.786 28 H 0.138 0.862 29 H 0.232 0.768 30 H -0.237 1.237 31 H -0.206 1.206 32 H 0.176 0.824 33 H 0.254 0.746 34 H 0.095 0.905 35 H 0.124 0.876 36 H 0.272 0.728 37 H 0.211 0.789 38 H 0.120 0.880 39 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.306 3.218 0.784 3.326 hybrid contribution 0.634 0.191 -1.657 1.784 sum 0.941 3.409 -0.873 3.643 Atomic orbital electron populations 1.22432 0.74936 1.06026 1.04548 1.44025 1.07606 1.04848 1.51949 1.22319 0.89950 0.92480 1.05632 1.19816 0.94025 0.94743 1.13543 1.24469 0.93602 1.08349 0.88968 1.86555 1.42750 1.90271 1.16360 0.94319 0.78968 0.71895 0.87752 1.21430 0.94269 0.95134 1.02776 1.20077 0.90972 0.87524 1.20546 1.17225 0.85295 0.84317 0.75366 1.90779 1.17684 1.85350 1.52695 1.45494 1.11713 1.04872 1.72450 1.22407 0.99884 0.78646 0.96809 0.87538 1.23521 1.02998 0.93457 0.96918 1.20691 0.92474 0.94331 0.98163 0.87609 1.23745 0.99750 0.91658 0.98644 1.73875 0.99817 1.17611 1.19861 1.84815 1.27114 1.39716 1.46817 1.26891 1.02471 0.87031 0.96346 1.23044 0.94640 1.03876 1.04615 1.23338 1.01043 0.94243 0.97368 0.90149 0.89517 0.86840 0.78620 0.86215 0.76765 1.23701 1.20621 0.82366 0.74614 0.90513 0.87600 0.72810 0.78881 0.88049 0.89858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.12 10.64 127.77 1.36 1.24 16 2 N -0.41 -0.38 3.16 -534.32 -1.69 -2.07 16 3 C 0.03 -0.08 9.94 83.48 0.83 0.75 16 4 C -0.21 0.27 5.43 -20.12 -0.11 0.16 16 5 C -0.04 0.10 3.02 71.24 0.22 0.31 16 6 O -0.55 -0.71 12.88 -148.98 -1.92 -2.63 16 7 Si 0.76 -2.95 30.60 68.60 2.10 -0.85 16 8 C -0.11 0.03 10.28 22.57 0.23 0.26 16 9 C -0.08 -0.21 6.88 40.35 0.28 0.07 16 10 C 0.59 2.74 7.77 86.44 0.67 3.41 16 11 O -0.58 -6.51 14.24 -4.33 -0.06 -6.58 16 12 N -0.69 1.07 5.33 -444.00 -2.37 -1.30 16 13 C 0.13 -0.19 4.27 45.52 0.19 0.01 16 14 H 0.11 0.24 7.42 -2.38 -0.02 0.22 16 15 C -0.13 0.38 7.27 31.12 0.23 0.61 16 16 C -0.04 0.03 4.29 -11.01 -0.05 -0.02 16 17 H 0.11 0.05 8.14 -2.39 -0.02 0.03 16 18 C 0.02 0.05 6.70 43.58 0.29 0.34 16 19 N -0.41 -3.13 12.07 -49.56 -0.60 -3.73 16 20 O 0.08 0.34 11.20 71.70 0.80 1.14 16 21 C -0.05 0.18 12.30 67.18 0.83 1.00 16 22 C -0.24 0.68 10.28 22.40 0.23 0.91 16 23 C -0.12 0.37 7.38 31.12 0.23 0.60 16 24 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 25 H 0.09 0.22 6.23 -2.38 -0.01 0.21 16 26 H 0.11 -0.90 8.14 -2.38 -0.02 -0.92 16 27 H 0.20 -1.63 6.21 -2.91 -0.02 -1.64 16 28 H 0.12 -0.41 7.96 -2.39 -0.02 -0.43 16 29 H 0.38 -1.47 8.70 -74.06 -0.64 -2.12 16 30 H -0.31 -1.47 7.11 99.48 0.71 -0.76 16 31 H -0.28 0.18 7.11 99.48 0.71 0.89 16 32 H 0.16 -0.65 7.49 -2.91 -0.02 -0.67 16 33 H 0.42 -2.68 7.68 -92.71 -0.71 -3.39 16 34 H 0.08 -0.12 8.14 -2.39 -0.02 -0.13 16 35 H 0.11 -0.60 6.62 -2.39 -0.02 -0.61 16 36 H 0.26 -3.40 8.06 -2.91 -0.02 -3.42 16 37 H 0.19 -1.62 7.12 -2.91 -0.02 -1.64 16 38 H 0.10 -0.50 8.07 -2.39 -0.02 -0.52 16 39 H 0.08 -0.21 8.14 -2.38 -0.02 -0.23 16 Total: 0.00 -23.21 332.40 1.49 -21.72 By element: Atomic # 1 Polarization: -15.16 SS G_CDS: -0.21 Total: -15.37 kcal Atomic # 6 Polarization: 4.23 SS G_CDS: 5.43 Total: 9.65 kcal Atomic # 7 Polarization: -2.44 SS G_CDS: -4.65 Total: -7.09 kcal Atomic # 8 Polarization: -6.88 SS G_CDS: -1.18 Total: -8.06 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: 2.10 Total: -0.85 kcal Total: -23.21 1.49 -21.72 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18339242_10803934.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.454 kcal (2) G-P(sol) polarization free energy of solvation -23.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.723 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds