Wall clock time and date at job start Tue Mar 9 2021 12:52:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.46952 * 2 1 4 4 C 1.50689 * 109.47230 * 119.99965 * 2 1 3 5 5 C 1.34855 * 125.89410 * 245.02428 * 4 2 1 6 6 C 1.40897 * 107.41823 * 179.97438 * 5 4 2 7 7 C 1.34849 * 107.41356 * 359.97438 * 6 5 4 8 8 C 1.50704 * 125.88382 * 179.97438 * 7 6 5 9 9 C 1.50700 * 109.47097 * 85.02918 * 8 7 6 10 10 O 1.21286 * 119.99904 * 359.97438 * 9 8 7 11 11 N 1.34776 * 120.00117 * 179.97438 * 9 8 7 12 12 C 1.46497 * 120.00053 * 174.76426 * 11 9 8 13 13 C 1.52994 * 112.85201 * 293.73301 * 12 11 9 14 14 O 1.42904 * 109.47415 * 305.11233 * 13 12 11 15 15 C 1.53784 * 113.61262 * 64.93329 * 12 11 9 16 16 C 1.53781 * 87.08289 * 139.97919 * 15 12 11 17 17 H 1.09000 * 113.61569 * 89.11445 * 16 15 12 18 18 O 1.42897 * 113.61583 * 219.93677 * 16 15 12 19 19 C 1.53780 * 87.07882 * 334.56705 * 16 15 12 20 20 N 1.36336 * 108.22256 * 0.26400 * 7 6 5 21 21 H 0.96701 * 114.00549 * 299.99865 * 1 2 3 22 22 H 1.09004 * 109.46873 * 240.00642 * 2 1 3 23 23 H 1.48497 * 109.99869 * 178.68222 * 3 2 1 24 24 H 1.48500 * 110.00132 * 300.00226 * 3 2 1 25 25 H 1.07999 * 126.28685 * 0.02562 * 5 4 2 26 26 H 1.07998 * 126.28560 * 180.02562 * 6 5 4 27 27 H 1.08991 * 109.47480 * 325.02557 * 8 7 6 28 28 H 1.09000 * 109.46918 * 205.02552 * 8 7 6 29 29 H 0.97001 * 120.00018 * 355.04564 * 11 9 8 30 30 H 1.09010 * 109.47357 * 65.11458 * 13 12 11 31 31 H 1.09007 * 109.47455 * 185.11123 * 13 12 11 32 32 H 0.96695 * 113.99801 * 179.97438 * 14 13 12 33 33 H 1.08998 * 113.61042 * 254.53093 * 15 12 11 34 34 H 1.08998 * 113.61269 * 25.42726 * 15 12 11 35 35 H 0.96699 * 114.00604 * 179.97438 * 18 16 15 36 36 H 1.09000 * 113.61547 * 270.88197 * 19 16 15 37 37 H 1.09000 * 113.61416 * 139.98254 * 19 16 15 38 38 H 0.97000 * 125.63580 * 179.73322 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.6298 -0.1485 2.2379 6 6 2.8970 -1.1603 3.1814 7 6 2.3511 -2.3017 2.7146 8 6 2.3917 -3.6442 3.3981 9 6 1.2600 -3.7380 4.3887 10 8 0.4959 -2.8063 4.5265 11 7 1.0968 -4.8574 5.1215 12 6 0.0693 -4.9068 6.1645 13 6 0.3559 -3.9538 7.3265 14 8 1.6572 -4.2220 7.8527 15 6 -1.3655 -4.8017 5.6211 16 6 -1.7528 -5.8686 6.6587 17 1 -2.0471 -5.4536 7.6227 18 8 -2.6801 -6.8372 6.1651 19 6 -0.2881 -6.3346 6.6100 20 7 1.7619 -2.0330 1.5149 21 1 -0.3934 0.4417 0.7650 22 1 1.7923 -0.5138 -0.8901 23 1 3.5345 1.7703 0.0321 24 1 1.5614 2.4680 -1.2084 25 1 2.9286 0.8869 2.3089 26 1 3.4386 -1.0430 4.1083 27 1 3.3418 -3.7576 3.9200 28 1 2.2895 -4.4340 2.6538 29 1 1.6625 -5.6289 4.9610 30 1 0.3127 -2.9241 6.9712 31 1 -0.3894 -4.0998 8.1085 32 1 1.9066 -3.6533 8.5939 33 1 -1.8295 -3.8315 5.7984 34 1 -1.4675 -5.1386 4.5895 35 1 -2.9273 -7.5112 6.8130 36 1 -0.0955 -7.0906 5.8488 37 1 0.1177 -6.6019 7.5857 38 1 1.2970 -2.6760 0.9570 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_14644196.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:17 Heat of formation + Delta-G solvation = -96.337590 kcal Electronic energy + Delta-G solvation = -22704.125968 eV Core-core repulsion = 19128.729490 eV Total energy + Delta-G solvation = -3575.396478 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.130 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.36318 -41.59401 -39.58485 -37.71496 -37.51120 -36.13746 -34.16874 -32.84407 -31.93195 -29.48245 -28.07918 -26.99336 -25.40900 -23.93760 -21.85215 -21.35583 -20.96547 -20.07157 -18.99192 -18.88781 -18.28421 -18.00144 -17.24411 -16.70880 -16.51674 -16.28400 -16.09833 -15.56580 -15.17567 -14.98476 -14.72432 -14.64051 -14.25989 -14.13041 -13.92951 -13.76914 -13.57725 -13.40675 -13.25106 -12.97951 -12.66595 -12.11016 -12.00254 -11.88179 -11.73129 -11.20309 -10.96159 -10.65650 -10.64300 -10.08851 -9.80672 -8.97083 -4.93895 1.10046 1.28320 1.63387 1.68618 1.87769 1.91529 2.27229 2.49146 2.93918 3.24052 3.36183 3.49705 3.65055 3.67373 3.70209 3.80353 3.96585 4.05451 4.17786 4.31165 4.35856 4.40169 4.48097 4.55423 4.60177 4.64793 4.70691 4.78749 4.89703 4.95629 5.09096 5.24596 5.28301 5.51962 5.99426 6.12995 6.53096 6.63808 6.65958 6.77936 6.84964 7.27204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.056 4.056 3 Si 0.804 3.196 4 C -0.021 4.021 5 C -0.200 4.200 6 C -0.198 4.198 7 C 0.034 3.966 8 C -0.068 4.068 9 C 0.514 3.486 10 O -0.564 6.564 11 N -0.702 5.702 12 C 0.154 3.846 13 C 0.087 3.913 14 O -0.578 6.578 15 C -0.126 4.126 16 C 0.081 3.919 17 H 0.105 0.895 18 O -0.577 6.577 19 C -0.150 4.150 20 N -0.538 5.538 21 H 0.395 0.605 22 H 0.106 0.894 23 H -0.284 1.284 24 H -0.293 1.293 25 H 0.155 0.845 26 H 0.140 0.860 27 H 0.138 0.862 28 H 0.122 0.878 29 H 0.414 0.586 30 H 0.042 0.958 31 H 0.075 0.925 32 H 0.397 0.603 33 H 0.070 0.930 34 H 0.078 0.922 35 H 0.398 0.602 36 H 0.099 0.901 37 H 0.093 0.907 38 H 0.417 0.583 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.405 -3.182 5.052 6.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.165 4.165 3 Si 0.708 3.292 4 C -0.135 4.135 5 C -0.225 4.225 6 C -0.223 4.223 7 C -0.080 4.080 8 C -0.109 4.109 9 C 0.301 3.699 10 O -0.442 6.442 11 N -0.355 5.355 12 C 0.067 3.933 13 C 0.008 3.992 14 O -0.386 6.386 15 C -0.164 4.164 16 C 0.022 3.978 17 H 0.122 0.878 18 O -0.386 6.386 19 C -0.188 4.188 20 N -0.134 5.134 21 H 0.245 0.755 22 H 0.123 0.877 23 H -0.211 1.211 24 H -0.220 1.220 25 H 0.172 0.828 26 H 0.158 0.842 27 H 0.155 0.845 28 H 0.141 0.859 29 H 0.251 0.749 30 H 0.060 0.940 31 H 0.093 0.907 32 H 0.247 0.753 33 H 0.088 0.912 34 H 0.097 0.903 35 H 0.249 0.751 36 H 0.117 0.883 37 H 0.112 0.888 38 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 1.400 -2.447 3.102 4.191 hybrid contribution 0.020 -1.078 0.341 1.131 sum 1.420 -3.525 3.443 5.128 Atomic orbital electron populations 1.86432 1.17668 1.82296 1.50483 1.25010 0.84860 1.11602 0.95052 0.92909 0.77730 0.74250 0.84339 1.21007 1.07444 0.84700 1.00331 1.20920 1.05744 1.00261 0.95543 1.20824 1.07631 0.92390 1.01450 1.19866 1.02736 0.96841 0.88557 1.20225 0.99295 0.93760 0.97580 1.20905 0.85644 0.81903 0.81465 1.90721 1.46222 1.38874 1.68358 1.45724 1.37717 1.16447 1.35566 1.21379 0.87153 0.97072 0.87691 1.22165 0.85650 0.97209 0.94206 1.86379 1.33450 1.64062 1.54688 1.23311 0.94401 0.98894 0.99820 1.23283 0.87582 0.89721 0.97236 0.87771 1.86497 1.64361 1.43166 1.44547 1.23884 0.96464 0.94734 1.03729 1.41908 1.44204 1.09244 1.18006 0.75532 0.87666 1.21067 1.22044 0.82774 0.84238 0.84457 0.85949 0.74868 0.94017 0.90749 0.75280 0.91161 0.90312 0.75091 0.88259 0.88827 0.74558 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.03 12.88 -148.98 -1.92 -3.95 16 2 C -0.06 -0.14 3.08 71.23 0.22 0.08 16 3 Si 0.80 0.03 30.60 68.60 2.10 2.13 16 4 C -0.02 -0.10 6.50 41.08 0.27 0.17 16 5 C -0.20 -1.00 9.37 22.14 0.21 -0.79 16 6 C -0.20 -1.18 10.77 22.14 0.24 -0.94 16 7 C 0.03 0.14 5.66 41.08 0.23 0.37 16 8 C -0.07 0.15 6.24 29.10 0.18 0.33 16 9 C 0.51 1.59 7.48 87.66 0.66 2.24 16 10 O -0.56 -6.48 14.45 -3.05 -0.04 -6.53 16 11 N -0.70 0.69 5.12 -420.55 -2.15 -1.46 16 12 C 0.15 -0.01 0.86 4.13 0.00 -0.01 16 13 C 0.09 -0.02 6.20 71.98 0.45 0.42 16 14 O -0.58 0.58 13.53 -148.98 -2.02 -1.44 16 15 C -0.13 -0.36 6.40 31.12 0.20 -0.17 16 16 C 0.08 -0.15 4.86 31.12 0.15 0.00 16 17 H 0.10 -0.58 7.61 -2.39 -0.02 -0.60 16 18 O -0.58 -0.16 13.67 -148.98 -2.04 -2.20 16 19 C -0.15 0.53 7.22 31.12 0.22 0.75 16 20 N -0.54 -2.12 6.07 -171.12 -1.04 -3.16 16 21 H 0.39 -1.07 8.70 -74.06 -0.64 -1.72 16 22 H 0.11 0.27 7.96 -2.38 -0.02 0.25 16 23 H -0.28 -1.40 7.11 99.48 0.71 -0.69 16 24 H -0.29 -1.81 7.11 99.48 0.71 -1.10 16 25 H 0.15 0.14 6.24 -2.91 -0.02 0.12 16 26 H 0.14 0.55 8.06 -2.91 -0.02 0.53 16 27 H 0.14 -0.86 8.14 -2.39 -0.02 -0.88 16 28 H 0.12 -0.90 8.14 -2.39 -0.02 -0.92 16 29 H 0.41 -2.52 8.71 -92.71 -0.81 -3.32 16 30 H 0.04 0.19 7.21 -2.38 -0.02 0.17 16 31 H 0.07 -0.32 7.32 -2.38 -0.02 -0.34 16 32 H 0.40 -3.28 9.12 -74.06 -0.68 -3.95 16 33 H 0.07 0.37 8.10 -2.39 -0.02 0.35 16 34 H 0.08 0.50 8.14 -2.39 -0.02 0.48 16 35 H 0.40 -3.44 9.12 -74.06 -0.68 -4.11 16 36 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 37 H 0.09 -0.48 8.10 -2.39 -0.02 -0.50 16 38 H 0.42 0.36 8.96 -92.71 -0.83 -0.47 16 Total: 0.00 -24.67 322.94 -6.53 -31.20 By element: Atomic # 1 Polarization: -14.62 SS G_CDS: -2.45 Total: -17.07 kcal Atomic # 6 Polarization: -0.56 SS G_CDS: 3.03 Total: 2.47 kcal Atomic # 7 Polarization: -1.43 SS G_CDS: -3.19 Total: -4.62 kcal Atomic # 8 Polarization: -8.10 SS G_CDS: -6.02 Total: -14.11 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: 2.10 Total: 2.13 kcal Total: -24.67 -6.53 -31.20 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_14644196.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.136 kcal (2) G-P(sol) polarization free energy of solvation -24.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.806 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.202 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds