Wall clock time and date at job start Tue Mar 9 2021 12:52:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86294 * 109.47316 * 2 1 4 4 C 1.50704 * 109.46786 * 239.99867 * 2 1 3 5 5 C 1.38249 * 119.96661 * 120.02554 * 4 2 1 6 6 C 1.38296 * 120.10926 * 179.97438 * 5 4 2 7 7 C 1.38127 * 120.05172 * 359.67845 * 6 5 4 8 8 C 1.38746 * 119.94474 * 0.59340 * 7 6 5 9 9 O 1.35905 * 120.05362 * 179.69986 * 8 7 6 10 10 C 1.42896 * 117.00269 * 359.72999 * 9 8 7 11 11 C 1.52998 * 109.47507 * 179.97438 * 10 9 8 12 12 C 1.52997 * 109.47262 * 179.97438 * 11 10 9 13 13 C 1.50700 * 109.46927 * 180.02562 * 12 11 10 14 14 O 1.21281 * 120.00142 * 0.02562 * 13 12 11 15 15 N 1.34784 * 119.99658 * 179.97438 * 13 12 11 16 16 C 1.46506 * 119.99715 * 184.87174 * 15 13 12 17 17 C 1.52994 * 112.84960 * 284.71995 * 16 15 13 18 18 O 1.42905 * 109.47194 * 312.30975 * 17 16 15 19 19 C 1.53780 * 113.61300 * 55.91561 * 16 15 13 20 20 C 1.53787 * 87.08105 * 89.11218 * 19 16 15 21 21 H 1.09004 * 113.61196 * 140.06163 * 20 19 16 22 22 O 1.42892 * 113.61445 * 270.88187 * 20 19 16 23 23 C 1.53779 * 113.61270 * 153.41148 * 16 15 13 24 24 C 1.38166 * 119.97705 * 300.00028 * 4 2 1 25 25 H 0.96696 * 114.00121 * 300.00028 * 1 2 3 26 26 H 1.08999 * 109.47030 * 120.00763 * 2 1 3 27 27 H 1.48505 * 110.00020 * 300.00139 * 3 2 1 28 28 H 1.48507 * 109.99671 * 61.31891 * 3 2 1 29 29 H 1.08001 * 119.94689 * 359.97438 * 5 4 2 30 30 H 1.07991 * 119.96907 * 179.97438 * 6 5 4 31 31 H 1.08001 * 120.02563 * 180.32209 * 7 6 5 32 32 H 1.09000 * 109.47111 * 59.99573 * 10 9 8 33 33 H 1.09003 * 109.47040 * 299.99827 * 10 9 8 34 34 H 1.09008 * 109.46794 * 60.00088 * 11 10 9 35 35 H 1.08995 * 109.47213 * 300.00450 * 11 10 9 36 36 H 1.09000 * 109.47192 * 60.00023 * 12 11 10 37 37 H 1.09003 * 109.47203 * 300.00128 * 12 11 10 38 38 H 0.97003 * 120.00124 * 4.87553 * 15 13 12 39 39 H 1.08996 * 109.47096 * 72.31083 * 17 16 15 40 40 H 1.08995 * 109.47108 * 192.31239 * 17 16 15 41 41 H 0.96697 * 113.99716 * 180.02562 * 18 17 16 42 42 H 1.09004 * 113.61353 * 334.56822 * 19 16 15 43 43 H 1.08998 * 113.68948 * 203.67260 * 19 16 15 44 44 H 0.96703 * 113.99645 * 179.97438 * 22 20 19 45 45 H 1.08992 * 113.61324 * 156.33522 * 23 16 15 46 46 H 1.09006 * 113.61097 * 25.43228 * 23 16 15 47 47 H 1.07998 * 120.02402 * 0.04339 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 -1.2305 5 6 2.7264 -0.0381 -2.1399 6 6 3.1894 -0.6874 -3.2698 7 6 2.8636 -2.0117 -3.4889 8 6 2.0610 -2.6869 -2.5806 9 8 1.7341 -3.9882 -2.7972 10 6 2.2468 -4.5971 -3.9840 11 6 1.7771 -6.0515 -4.0548 12 6 2.3255 -6.7032 -5.3258 13 6 1.8624 -8.1355 -5.3958 14 8 1.1622 -8.5902 -4.5160 15 7 2.2255 -8.9110 -6.4367 16 6 1.6896 -10.2689 -6.5604 17 6 2.3357 -11.2538 -5.5841 18 8 3.7565 -11.1082 -5.6310 19 6 0.1528 -10.3264 -6.5668 20 6 0.2314 -10.1609 -8.0938 21 1 -0.4864 -10.7755 -8.6370 22 8 0.2315 -8.7978 -8.5225 23 6 1.6364 -10.7804 -8.0097 24 6 1.5971 -2.0333 -1.4486 25 1 -0.3933 0.4417 0.7650 26 1 1.7923 -0.5139 0.8899 27 1 1.5615 2.4679 -1.2085 28 1 1.5878 2.4584 1.2243 29 1 2.9865 0.9958 -1.9676 30 1 3.8100 -0.1599 -3.9788 31 1 3.2297 -2.5198 -4.3688 32 1 3.3362 -4.5679 -3.9658 33 1 1.8833 -4.0546 -4.8568 34 1 0.6876 -6.0809 -4.0728 35 1 2.1408 -6.5936 -3.1820 36 1 3.4150 -6.6736 -5.3082 37 1 1.9614 -6.1609 -6.1984 38 1 2.8416 -8.5701 -7.1038 39 1 1.9825 -11.0483 -4.5737 40 1 2.0655 -12.2722 -5.8633 41 1 4.2327 -11.7034 -5.0360 42 1 -0.3178 -9.4839 -6.0600 43 1 -0.2507 -11.2888 -6.2521 44 1 0.2811 -8.6873 -9.4819 45 1 1.6398 -11.8674 -8.0894 46 1 2.3635 -10.3044 -8.6676 47 1 0.9756 -2.5579 -0.7381 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_4549616.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:35 Heat of formation + Delta-G solvation = -144.422291 kcal Electronic energy + Delta-G solvation = -28840.000347 eV Core-core repulsion = 24569.961101 eV Total energy + Delta-G solvation = -4270.039246 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.74265 -41.13034 -39.59513 -38.96600 -37.57648 -37.37262 -35.93321 -34.77672 -33.72576 -32.49552 -31.13103 -28.95375 -27.98230 -27.01279 -26.71953 -24.02251 -23.54580 -22.95140 -21.70094 -21.35224 -20.26349 -18.86375 -18.49211 -18.37461 -18.29460 -17.93447 -17.38482 -17.16733 -16.99939 -16.76924 -16.52861 -16.02520 -15.79407 -15.59049 -15.51680 -15.15274 -14.78518 -14.46384 -14.35900 -14.11123 -13.86344 -13.72926 -13.51221 -13.38031 -13.34895 -13.14794 -13.09303 -12.65756 -12.58009 -12.35020 -12.21499 -12.14201 -11.86003 -11.57784 -11.54789 -11.47144 -11.08640 -10.98169 -10.51820 -10.49743 -9.84163 -9.78092 -9.11049 -4.92712 0.32194 0.53621 1.30363 1.63109 1.81390 1.95798 2.01474 2.41219 2.74147 2.95208 3.04647 3.37510 3.42444 3.51914 3.62099 3.76863 3.83267 3.89765 3.91912 4.02265 4.07793 4.13021 4.21725 4.30682 4.33414 4.34989 4.36162 4.37221 4.46147 4.53009 4.56957 4.62293 4.63144 4.72237 4.73705 4.82028 4.99071 5.06145 5.07668 5.08779 5.26014 5.38684 5.48069 5.57654 5.67399 5.79938 6.47531 6.52647 6.58410 6.61877 6.65224 7.39494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.035 4.035 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.133 3.867 9 O -0.312 6.312 10 C 0.060 3.940 11 C -0.103 4.103 12 C -0.136 4.136 13 C 0.523 3.477 14 O -0.539 6.539 15 N -0.690 5.690 16 C 0.163 3.837 17 C 0.075 3.925 18 O -0.568 6.568 19 C -0.131 4.131 20 C 0.079 3.921 21 H 0.073 0.927 22 O -0.546 6.546 23 C -0.166 4.166 24 C -0.125 4.125 25 H 0.380 0.620 26 H 0.079 0.921 27 H -0.255 1.255 28 H -0.261 1.261 29 H 0.129 0.871 30 H 0.131 0.869 31 H 0.130 0.870 32 H 0.064 0.936 33 H 0.064 0.936 34 H 0.082 0.918 35 H 0.082 0.918 36 H 0.096 0.904 37 H 0.098 0.902 38 H 0.403 0.597 39 H 0.057 0.943 40 H 0.054 0.946 41 H 0.380 0.620 42 H 0.093 0.907 43 H 0.104 0.896 44 H 0.381 0.619 45 H 0.103 0.897 46 H 0.081 0.919 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.449 -1.760 -3.801 6.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.035 4.035 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.015 4.015 11 C -0.141 4.141 12 C -0.177 4.177 13 C 0.310 3.690 14 O -0.416 6.416 15 N -0.341 5.341 16 C 0.075 3.925 17 C -0.004 4.004 18 O -0.373 6.373 19 C -0.169 4.169 20 C 0.020 3.980 21 H 0.091 0.909 22 O -0.351 6.351 23 C -0.204 4.204 24 C -0.144 4.144 25 H 0.228 0.772 26 H 0.096 0.904 27 H -0.179 1.179 28 H -0.187 1.187 29 H 0.146 0.854 30 H 0.149 0.851 31 H 0.148 0.852 32 H 0.082 0.918 33 H 0.082 0.918 34 H 0.101 0.899 35 H 0.101 0.899 36 H 0.114 0.886 37 H 0.116 0.884 38 H 0.238 0.762 39 H 0.076 0.924 40 H 0.072 0.928 41 H 0.226 0.774 42 H 0.112 0.888 43 H 0.122 0.878 44 H 0.228 0.772 45 H 0.121 0.879 46 H 0.099 0.901 47 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.496 -1.131 -3.419 5.019 hybrid contribution -0.465 -0.622 -0.251 0.816 sum 3.031 -1.754 -3.671 5.073 Atomic orbital electron populations 1.86600 1.17644 1.80204 1.49738 1.24854 0.84618 1.11110 0.98187 0.94991 0.91711 0.74320 0.80209 1.19021 0.96575 0.93021 0.94892 1.20843 1.01275 0.99812 0.95263 1.20877 0.98010 0.93674 0.96553 1.21308 1.03508 0.96467 1.01141 1.18993 0.94366 0.83519 0.94411 1.86080 1.70939 1.22347 1.43168 1.22832 0.98549 0.93965 0.86198 1.21209 1.02947 0.92149 0.97783 1.21500 1.02866 0.93141 1.00146 1.20420 0.79847 0.87671 0.81049 1.90704 1.38051 1.74901 1.37970 1.45289 1.48377 1.13190 1.27238 1.21140 0.93683 0.82683 0.94954 1.22507 0.81326 0.97128 0.99487 1.86444 1.17967 1.65276 1.67655 1.23351 0.94604 1.04336 0.94608 1.22698 0.95596 0.83411 0.96327 0.90872 1.86505 1.96650 1.24169 1.27761 1.23986 0.98802 1.01996 0.95637 1.20236 1.02778 0.94092 0.97276 0.77199 0.90353 1.17949 1.18684 0.85408 0.85127 0.85210 0.91762 0.91804 0.89900 0.89921 0.88604 0.88392 0.76215 0.92427 0.92790 0.77357 0.88835 0.87754 0.77199 0.87913 0.90055 0.84965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.26 12.74 -35.23 -0.45 -1.71 16 2 C -0.08 -0.08 2.81 36.01 0.10 0.02 16 3 Si 0.69 -0.17 29.79 -169.99 -5.06 -5.23 16 4 C -0.03 -0.09 5.42 -104.64 -0.57 -0.66 16 5 C -0.15 -0.22 8.67 -39.56 -0.34 -0.56 16 6 C -0.07 -0.06 10.04 -39.60 -0.40 -0.46 16 7 C -0.21 -0.32 9.04 -39.43 -0.36 -0.68 16 8 C 0.13 0.46 6.69 -39.22 -0.26 0.20 16 9 O -0.31 -1.16 10.14 -19.44 -0.20 -1.35 16 10 C 0.06 0.03 4.74 37.16 0.18 0.20 16 11 C -0.10 -0.11 4.87 -26.73 -0.13 -0.24 16 12 C -0.14 0.10 5.70 -27.88 -0.16 -0.06 16 13 C 0.52 1.20 7.34 -10.98 -0.08 1.12 16 14 O -0.54 -3.18 14.00 5.56 0.08 -3.11 16 15 N -0.69 -0.40 4.35 -46.85 -0.20 -0.60 16 16 C 0.16 0.08 0.81 -131.01 -0.11 -0.03 16 17 C 0.07 0.04 6.47 37.15 0.24 0.28 16 18 O -0.57 -0.43 13.40 -35.23 -0.47 -0.90 16 19 C -0.13 -0.10 6.71 -25.92 -0.17 -0.27 16 20 C 0.08 -0.08 5.28 -25.91 -0.14 -0.22 16 21 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 22 O -0.55 0.25 13.09 -35.23 -0.46 -0.21 16 23 C -0.17 0.27 7.22 -25.92 -0.19 0.09 16 24 C -0.13 -0.48 9.55 -39.43 -0.38 -0.86 16 25 H 0.38 -0.70 8.74 45.56 0.40 -0.30 16 26 H 0.08 -0.05 7.96 -51.93 -0.41 -0.46 16 27 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 28 H -0.26 -0.43 7.11 56.52 0.40 -0.02 16 29 H 0.13 -0.07 4.87 -52.49 -0.26 -0.33 16 30 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 31 H 0.13 -0.08 6.30 -52.49 -0.33 -0.41 16 32 H 0.06 -0.07 7.65 -51.93 -0.40 -0.47 16 33 H 0.06 -0.05 7.67 -51.93 -0.40 -0.44 16 34 H 0.08 0.23 8.10 -51.92 -0.42 -0.19 16 35 H 0.08 0.21 8.10 -51.93 -0.42 -0.21 16 36 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 37 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.40 -0.48 8.75 -40.82 -0.36 -0.84 16 39 H 0.06 0.13 7.68 -51.93 -0.40 -0.27 16 40 H 0.05 -0.07 7.93 -51.93 -0.41 -0.48 16 41 H 0.38 -1.09 9.12 45.56 0.42 -0.68 16 42 H 0.09 0.35 6.72 -51.93 -0.35 0.01 16 43 H 0.10 -0.09 8.10 -51.93 -0.42 -0.51 16 44 H 0.38 -1.70 9.12 45.56 0.42 -1.29 16 45 H 0.10 -0.28 7.95 -51.93 -0.41 -0.69 16 46 H 0.08 -0.15 8.13 -51.93 -0.42 -0.57 16 47 H 0.13 0.51 8.06 -52.49 -0.42 0.09 16 LS Contribution 386.52 15.07 5.82 5.82 Total: 0.00 -11.20 386.52 -9.19 -20.39 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -5.49 Total: -10.97 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -2.76 Total: -2.14 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.20 Total: -0.60 kcal Atomic # 8 Polarization: -5.78 SS G_CDS: -1.50 Total: -7.28 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.06 Total: -5.23 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -11.20 -9.19 -20.39 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4549616.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.032 kcal (2) G-P(sol) polarization free energy of solvation -11.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.194 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds