Wall clock time and date at job start Tue Mar 9 2021 12:52:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47001 * 2 1 4 4 C 1.50701 * 109.47194 * 240.00433 * 2 1 3 5 5 C 1.38243 * 119.94657 * 120.00129 * 4 2 1 6 6 C 1.38163 * 120.05656 * 179.97438 * 5 4 2 7 7 C 1.38711 * 119.94462 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.05838 * 180.02562 * 7 6 5 9 9 C 1.42901 * 116.99655 * 359.97414 * 8 7 6 10 10 C 1.50705 * 109.47109 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99862 * 0.02562 * 10 9 8 12 12 N 1.34779 * 120.00001 * 179.97438 * 10 9 8 13 13 C 1.46497 * 119.99890 * 174.63442 * 12 10 9 14 14 C 1.53004 * 112.84866 * 75.46342 * 13 12 10 15 15 O 1.42902 * 109.46749 * 55.35818 * 14 13 12 16 16 C 1.53777 * 113.61425 * 206.77472 * 13 12 10 17 17 C 1.53784 * 87.08230 * 89.11754 * 16 13 12 18 18 H 1.08998 * 113.61337 * 139.98070 * 17 16 13 19 19 O 1.42894 * 113.68747 * 270.87296 * 17 16 13 20 20 C 1.53778 * 87.08145 * 25.43386 * 17 16 13 21 21 C 1.38758 * 119.88773 * 359.97438 * 7 6 5 22 22 N 1.48000 * 120.02447 * 179.97438 * 21 7 6 23 23 O 1.21803 * 119.99582 * 180.02562 * 22 21 7 24 24 O 1.21802 * 120.00492 * 359.72702 * 22 21 7 25 25 C 1.38119 * 119.94120 * 0.25548 * 21 7 6 26 26 H 0.96698 * 113.99862 * 59.99894 * 1 2 3 27 27 H 1.09003 * 109.46763 * 120.00013 * 2 1 3 28 28 H 1.48507 * 109.99834 * 60.00105 * 3 2 1 29 29 H 1.48500 * 109.99753 * 181.31374 * 3 2 1 30 30 H 1.07998 * 119.97157 * 359.97428 * 5 4 2 31 31 H 1.08004 * 120.03003 * 179.97438 * 6 5 4 32 32 H 1.09004 * 109.47265 * 300.00039 * 9 8 7 33 33 H 1.08999 * 109.47583 * 60.00417 * 9 8 7 34 34 H 0.96994 * 119.99912 * 354.63770 * 12 10 9 35 35 H 1.08998 * 109.46652 * 175.35303 * 14 13 12 36 36 H 1.08993 * 109.47477 * 295.35725 * 14 13 12 37 37 H 0.96703 * 113.99747 * 179.97438 * 15 14 13 38 38 H 1.09003 * 113.61480 * 203.66675 * 16 13 12 39 39 H 1.09002 * 113.61668 * 334.56463 * 16 13 12 40 40 H 0.96705 * 113.99621 * 277.53370 * 19 17 16 41 41 H 1.09001 * 113.61400 * 220.02266 * 20 17 16 42 42 H 1.08999 * 113.69593 * 89.12630 * 20 17 16 43 43 H 1.08007 * 119.97032 * 179.74260 * 25 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7261 -0.0373 -2.1397 6 6 3.1884 -0.6865 -3.2683 7 6 2.8539 -2.0145 -3.4891 8 8 3.3078 -2.6554 -4.5982 9 6 4.1247 -1.9003 -5.4951 10 6 4.5311 -2.7696 -6.6572 11 8 4.1575 -3.9221 -6.7121 12 7 5.3088 -2.2659 -7.6359 13 6 5.8009 -3.1401 -8.7035 14 6 4.7210 -3.4910 -9.7291 15 8 4.1582 -2.2888 -10.2583 16 6 7.1192 -2.6610 -9.3336 17 6 7.8427 -3.4832 -8.2540 18 1 8.7228 -4.0098 -8.6230 19 8 8.0956 -2.7548 -7.0510 20 6 6.5818 -4.3611 -8.1891 21 6 2.0561 -2.6877 -2.5750 22 7 1.6970 -4.1045 -2.8078 23 8 0.9962 -4.6949 -2.0053 24 8 2.0976 -4.6786 -3.8046 25 6 1.5927 -2.0329 -1.4507 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5139 0.8900 28 1 1.5614 2.4679 1.2086 29 1 3.5346 1.7702 -0.0320 30 1 2.9859 0.9967 -1.9676 31 1 3.8089 -0.1602 -3.9786 32 1 3.5630 -1.0413 -5.8624 33 1 5.0159 -1.5546 -4.9714 34 1 5.5428 -1.3246 -7.6334 35 1 5.1636 -4.0718 -10.5383 36 1 3.9386 -4.0769 -9.2470 37 1 3.4653 -2.4355 -10.9167 38 1 7.2797 -3.0322 -10.3458 39 1 7.2803 -1.5865 -9.2453 40 1 8.8875 -2.2008 -7.0857 41 1 6.3089 -4.6591 -7.1768 42 1 6.5940 -5.1976 -8.8878 43 1 0.9682 -2.5553 -0.7410 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_4549638.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:50 Heat of formation + Delta-G solvation = -122.552515 kcal Electronic energy + Delta-G solvation = -32360.434696 eV Core-core repulsion = 27571.402597 eV Total energy + Delta-G solvation = -4789.032099 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.128 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.97869 -41.96188 -41.45547 -40.01598 -39.00114 -37.62281 -37.47664 -37.08168 -35.97241 -34.07664 -33.42982 -32.32503 -30.06824 -28.48007 -27.55606 -27.06237 -26.66346 -24.32567 -23.40950 -22.76486 -21.88583 -20.56491 -20.24827 -19.40877 -19.16184 -18.65183 -18.37720 -18.29430 -18.24774 -18.08045 -17.56154 -17.10436 -16.96934 -16.53183 -16.46703 -16.24945 -15.80479 -15.62943 -15.48740 -15.06953 -14.96669 -14.80721 -14.10348 -13.97567 -13.88578 -13.79381 -13.42855 -13.33281 -13.23051 -12.75193 -12.49275 -12.38426 -12.25204 -12.16234 -12.09357 -11.81131 -11.69825 -11.53106 -11.15884 -11.06197 -10.89305 -10.74303 -10.62955 -10.00070 -9.85068 -5.28323 -1.08987 -0.33515 0.42070 0.57485 1.03549 1.14687 1.38388 1.55389 1.77199 1.97831 2.25269 2.87111 2.96848 3.02589 3.08221 3.24534 3.28976 3.36373 3.44215 3.50653 3.57207 3.65381 3.69234 3.75108 3.79743 4.04132 4.18555 4.19772 4.32146 4.34013 4.36894 4.47550 4.49636 4.58201 4.68871 4.71326 4.72560 4.93744 4.96605 5.02171 5.45551 5.53695 5.75789 6.35031 6.40927 6.52299 6.58650 6.97804 7.17452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.065 4.065 3 Si 0.692 3.308 4 C -0.159 4.159 5 C -0.025 4.025 6 C -0.209 4.209 7 C 0.201 3.799 8 O -0.253 6.253 9 C 0.032 3.968 10 C 0.522 3.478 11 O -0.500 6.500 12 N -0.688 5.688 13 C 0.166 3.834 14 C 0.073 3.927 15 O -0.570 6.570 16 C -0.162 4.162 17 C 0.079 3.921 18 H 0.075 0.925 19 O -0.547 6.547 20 C -0.132 4.132 21 C -0.076 4.076 22 N 0.029 4.971 23 O -0.178 6.178 24 O -0.118 6.118 25 C 0.009 3.991 26 H 0.381 0.619 27 H 0.121 0.879 28 H -0.249 1.249 29 H -0.254 1.254 30 H 0.148 0.852 31 H 0.156 0.844 32 H 0.100 0.900 33 H 0.102 0.898 34 H 0.404 0.596 35 H 0.057 0.943 36 H 0.060 0.940 37 H 0.381 0.619 38 H 0.105 0.895 39 H 0.081 0.919 40 H 0.381 0.619 41 H 0.094 0.906 42 H 0.107 0.893 43 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.816 9.319 -5.088 11.659 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.593 3.407 4 C -0.160 4.160 5 C -0.043 4.043 6 C -0.228 4.228 7 C 0.151 3.849 8 O -0.162 6.162 9 C -0.046 4.046 10 C 0.306 3.694 11 O -0.373 6.373 12 N -0.341 5.341 13 C 0.079 3.921 14 C -0.006 4.006 15 O -0.375 6.375 16 C -0.200 4.200 17 C 0.019 3.981 18 H 0.093 0.907 19 O -0.352 6.352 20 C -0.170 4.170 21 C -0.161 4.161 22 N 0.549 4.451 23 O -0.387 6.387 24 O -0.342 6.342 25 C -0.010 4.010 26 H 0.229 0.771 27 H 0.138 0.862 28 H -0.173 1.173 29 H -0.179 1.179 30 H 0.166 0.834 31 H 0.174 0.826 32 H 0.118 0.882 33 H 0.120 0.880 34 H 0.239 0.761 35 H 0.075 0.925 36 H 0.078 0.922 37 H 0.228 0.772 38 H 0.123 0.877 39 H 0.100 0.900 40 H 0.228 0.772 41 H 0.113 0.887 42 H 0.126 0.874 43 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 5.120 9.168 -3.428 11.046 hybrid contribution 0.330 -0.271 -0.555 0.700 sum 5.450 8.898 -3.984 11.169 Atomic orbital electron populations 1.86558 1.16607 1.81617 1.49330 1.25093 0.85665 1.10240 0.96578 0.94893 0.80732 0.77041 0.88022 1.20303 1.02314 0.94048 0.99371 1.21257 0.91904 0.99780 0.91322 1.21281 1.07064 0.92727 1.01767 1.18709 0.89788 0.90774 0.85621 1.86497 1.62720 1.37557 1.29399 1.22721 0.96190 0.94924 0.90795 1.19669 0.78915 0.88152 0.82708 1.90823 1.52303 1.17366 1.76796 1.45076 1.51876 1.12493 1.24665 1.21153 0.91795 0.92384 0.86757 1.22511 0.96147 0.86974 0.95002 1.86421 1.57788 1.31481 1.61849 1.23944 0.94413 1.01875 0.99787 1.22721 0.97143 0.93137 0.85083 0.90738 1.86492 1.49931 1.63233 1.35576 1.23375 0.93001 0.96058 1.04534 1.20582 1.10605 0.84002 1.00880 1.43336 0.99157 1.02288 1.00332 1.94553 1.35212 1.66680 1.42233 1.94698 1.54878 1.67665 1.16934 1.20824 0.93552 0.93537 0.93065 0.77137 0.86187 1.17296 1.17912 0.83445 0.82599 0.88202 0.88022 0.76129 0.92482 0.92174 0.77179 0.87698 0.90001 0.77160 0.88724 0.87447 0.81840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.71 12.76 -35.23 -0.45 0.26 16 2 C -0.07 0.14 2.82 36.01 0.10 0.24 16 3 Si 0.69 -2.40 29.78 -169.99 -5.06 -7.46 16 4 C -0.16 0.26 5.39 -104.60 -0.56 -0.30 16 5 C -0.02 0.08 8.66 -39.61 -0.34 -0.26 16 6 C -0.21 0.54 9.04 -39.43 -0.36 0.18 16 7 C 0.20 0.29 6.67 -39.21 -0.26 0.02 16 8 O -0.25 -0.77 7.68 -49.77 -0.38 -1.16 16 9 C 0.03 -0.03 5.22 36.01 0.19 0.15 16 10 C 0.52 1.00 7.41 -10.98 -0.08 0.92 16 11 O -0.50 -3.26 14.42 -14.35 -0.21 -3.47 16 12 N -0.69 0.40 4.50 -46.85 -0.21 0.19 16 13 C 0.17 -0.06 0.76 -131.00 -0.10 -0.16 16 14 C 0.07 -0.01 6.42 37.16 0.24 0.23 16 15 O -0.57 0.10 13.54 -35.23 -0.48 -0.38 16 16 C -0.16 0.41 7.23 -25.92 -0.19 0.22 16 17 C 0.08 -0.14 5.27 -25.92 -0.14 -0.28 16 18 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 19 O -0.55 0.75 13.09 -35.23 -0.46 0.29 16 20 C -0.13 -0.03 6.71 -25.92 -0.17 -0.20 16 21 C -0.08 -0.25 6.87 -79.81 -0.55 -0.80 16 22 N 0.03 0.20 4.45 34.03 0.15 0.36 16 23 O -0.18 -1.37 18.45 -29.46 -0.54 -1.92 16 24 O -0.12 -1.07 17.24 -36.49 -0.63 -1.70 16 25 C 0.01 0.01 9.11 -39.61 -0.36 -0.35 16 26 H 0.38 -2.02 8.70 45.56 0.40 -1.62 16 27 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 28 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 29 H -0.25 0.41 7.11 56.52 0.40 0.81 16 30 H 0.15 -0.90 4.87 -52.49 -0.26 -1.15 16 31 H 0.16 -0.93 6.30 -52.48 -0.33 -1.26 16 32 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 33 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 34 H 0.40 -1.22 8.75 -40.82 -0.36 -1.58 16 35 H 0.06 -0.11 8.09 -51.93 -0.42 -0.53 16 36 H 0.06 0.12 7.51 -51.93 -0.39 -0.27 16 37 H 0.38 -1.38 9.12 45.56 0.42 -0.97 16 38 H 0.10 -0.36 8.06 -51.93 -0.42 -0.77 16 39 H 0.08 -0.24 8.13 -51.93 -0.42 -0.66 16 40 H 0.38 -2.05 9.12 45.56 0.42 -1.64 16 41 H 0.09 0.33 6.72 -51.93 -0.35 -0.02 16 42 H 0.11 -0.15 8.10 -51.93 -0.42 -0.57 16 43 H 0.16 0.17 7.61 -52.48 -0.40 -0.23 16 LS Contribution 370.24 15.07 5.58 5.58 Total: 0.00 -14.14 370.24 -8.64 -22.78 By element: Atomic # 1 Polarization: -9.64 SS G_CDS: -3.37 Total: -13.00 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -2.58 Total: -0.38 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.06 Total: 0.54 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -3.15 Total: -8.07 kcal Atomic # 14 Polarization: -2.40 SS G_CDS: -5.06 Total: -7.46 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -14.14 -8.64 -22.78 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4549638.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.768 kcal (2) G-P(sol) polarization free energy of solvation -14.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.642 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.785 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds