Wall clock time and date at job start Tue Mar 9 2021 12:52:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47262 * 2 1 4 4 C 1.50704 * 109.46996 * 240.00043 * 2 1 3 5 5 C 1.38246 * 119.96886 * 120.01746 * 4 2 1 6 6 C 1.38292 * 120.10695 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05540 * 359.68571 * 6 5 4 8 8 C 1.38755 * 119.94549 * 0.59094 * 7 6 5 9 9 O 1.35905 * 120.05425 * 179.69975 * 8 7 6 10 10 C 1.42895 * 117.00120 * 359.72704 * 9 8 7 11 11 C 1.50695 * 109.47068 * 179.97438 * 10 9 8 12 12 O 1.21285 * 120.00263 * 359.97438 * 11 10 9 13 13 N 1.34780 * 120.00238 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00053 * 185.14714 * 13 11 10 15 15 C 1.52996 * 112.85139 * 64.84392 * 14 13 11 16 16 O 1.42900 * 109.47341 * 44.29951 * 15 14 13 17 17 C 1.53786 * 113.69004 * 196.11320 * 14 13 11 18 18 C 1.53784 * 87.08221 * 89.12864 * 17 14 13 19 19 H 1.08994 * 113.69333 * 139.99694 * 18 17 14 20 20 O 1.42898 * 113.60993 * 270.88578 * 18 17 14 21 21 C 1.53786 * 113.61405 * 293.64832 * 14 13 11 22 22 C 1.38163 * 119.97167 * 300.00028 * 4 2 1 23 23 H 0.96701 * 113.99908 * 299.99360 * 1 2 3 24 24 H 1.08997 * 109.47611 * 120.00297 * 2 1 3 25 25 H 1.48500 * 110.00050 * 300.00486 * 3 2 1 26 26 H 1.48495 * 109.99771 * 61.31956 * 3 2 1 27 27 H 1.08001 * 119.94483 * 359.97438 * 5 4 2 28 28 H 1.07998 * 119.97122 * 179.97438 * 6 5 4 29 29 H 1.08003 * 120.02958 * 180.31887 * 7 6 5 30 30 H 1.09007 * 109.47158 * 60.00187 * 10 9 8 31 31 H 1.08995 * 109.47253 * 300.00206 * 10 9 8 32 32 H 0.96997 * 119.99806 * 5.15050 * 13 11 10 33 33 H 1.09001 * 109.47431 * 164.30218 * 15 14 13 34 34 H 1.08998 * 109.47074 * 284.29935 * 15 14 13 35 35 H 0.96700 * 114.00428 * 179.97438 * 16 15 14 36 36 H 1.08998 * 113.61512 * 203.67512 * 17 14 13 37 37 H 1.08995 * 113.60991 * 334.57975 * 17 14 13 38 38 H 0.96706 * 114.00181 * 277.49356 * 20 18 17 39 39 H 1.09002 * 113.61560 * 25.34683 * 21 14 13 40 40 H 1.09003 * 113.61549 * 156.17332 * 21 14 13 41 41 H 1.07999 * 120.02948 * 0.04461 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7263 -0.0381 -2.1399 6 6 3.1893 -0.6873 -3.2698 7 6 2.8635 -2.0116 -3.4890 8 6 2.0610 -2.6869 -2.5806 9 8 1.7341 -3.9882 -2.7972 10 6 2.2467 -4.5970 -3.9840 11 6 1.7841 -6.0295 -4.0537 12 8 1.0847 -6.4845 -3.1735 13 7 2.1485 -6.8055 -5.0938 14 6 1.6085 -8.1614 -5.2205 15 6 0.0958 -8.1795 -5.4493 16 8 -0.2510 -7.1904 -6.4206 17 6 2.3908 -9.0487 -6.2032 18 6 3.2737 -9.4546 -5.0113 19 1 3.5413 -10.5111 -5.0043 20 8 4.3987 -8.5959 -4.8138 21 6 2.0749 -9.1166 -4.1093 22 6 1.5971 -2.0332 -1.4486 23 1 -0.3933 0.4416 0.7651 24 1 1.7924 -0.5138 0.8899 25 1 1.5614 2.4679 -1.2084 26 1 1.5879 2.4585 1.2242 27 1 2.9863 0.9960 -1.9677 28 1 3.8099 -0.1599 -3.9790 29 1 3.2296 -2.5197 -4.3689 30 1 3.3362 -4.5678 -3.9659 31 1 1.8832 -4.0545 -4.8567 32 1 2.7682 -6.4662 -5.7583 33 1 -0.2055 -9.1633 -5.8090 34 1 -0.4160 -7.9630 -4.5116 35 1 -1.1970 -7.1457 -6.6161 36 1 1.8035 -9.8711 -6.6116 37 1 2.9238 -8.4863 -6.9698 38 1 5.1559 -8.8035 -5.3784 39 1 2.3530 -8.6091 -3.1855 40 1 1.4005 -9.9569 -3.9442 41 1 0.9756 -2.5578 -0.7380 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_4860298.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:58 Heat of formation + Delta-G solvation = -137.055450 kcal Electronic energy + Delta-G solvation = -25773.636939 eV Core-core repulsion = 21814.992381 eV Total energy + Delta-G solvation = -3958.644558 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.91012 -41.24464 -39.74912 -38.76048 -37.58063 -37.41193 -35.92194 -34.09223 -32.61802 -31.66325 -29.52263 -28.34057 -26.96395 -26.80521 -23.74815 -23.65587 -22.48781 -21.52590 -20.42959 -19.16987 -18.60678 -18.53873 -18.34953 -17.98171 -17.43474 -17.38351 -16.93422 -16.80050 -16.38175 -15.90095 -15.78941 -15.50297 -15.36525 -14.91240 -14.82640 -14.56081 -14.12721 -13.79323 -13.73702 -13.64516 -13.44712 -13.28440 -13.18423 -12.70543 -12.53024 -12.20255 -12.16763 -12.03832 -11.73776 -11.45537 -11.16716 -10.96097 -10.68903 -10.58926 -10.02778 -9.91456 -9.30952 -4.92035 0.18109 0.36845 1.26051 1.44504 1.49473 1.62059 1.94990 2.54124 2.61487 3.02974 3.12679 3.34721 3.47637 3.50120 3.59973 3.76148 3.76714 3.82907 3.96134 4.03961 4.10829 4.17229 4.24825 4.25726 4.39427 4.42766 4.46795 4.58903 4.63075 4.65229 4.81377 4.85908 4.95493 4.98725 5.03096 5.21568 5.34343 5.43667 5.52818 5.66870 6.25602 6.47788 6.55118 6.73561 6.90703 7.14874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.099 4.099 3 Si 0.784 3.216 4 C -0.047 4.047 5 C -0.158 4.158 6 C -0.069 4.069 7 C -0.205 4.205 8 C 0.112 3.888 9 O -0.321 6.321 10 C 0.041 3.959 11 C 0.517 3.483 12 O -0.569 6.569 13 N -0.672 5.672 14 C 0.149 3.851 15 C 0.074 3.926 16 O -0.581 6.581 17 C -0.148 4.148 18 C 0.086 3.914 19 H 0.094 0.906 20 O -0.567 6.567 21 C -0.144 4.144 22 C -0.150 4.150 23 H 0.395 0.605 24 H 0.090 0.910 25 H -0.293 1.293 26 H -0.286 1.286 27 H 0.150 0.850 28 H 0.166 0.834 29 H 0.158 0.842 30 H 0.121 0.879 31 H 0.117 0.883 32 H 0.416 0.584 33 H 0.081 0.919 34 H 0.029 0.971 35 H 0.393 0.607 36 H 0.123 0.877 37 H 0.092 0.908 38 H 0.399 0.601 39 H 0.052 0.948 40 H 0.118 0.882 41 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.201 -1.423 -5.792 8.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.206 4.206 3 Si 0.688 3.312 4 C -0.047 4.047 5 C -0.176 4.176 6 C -0.086 4.086 7 C -0.223 4.223 8 C 0.067 3.933 9 O -0.235 6.235 10 C -0.037 4.037 11 C 0.303 3.697 12 O -0.448 6.448 13 N -0.325 5.325 14 C 0.062 3.938 15 C -0.005 4.005 16 O -0.388 6.388 17 C -0.185 4.185 18 C 0.026 3.974 19 H 0.112 0.888 20 O -0.375 6.375 21 C -0.182 4.182 22 C -0.169 4.169 23 H 0.245 0.755 24 H 0.108 0.892 25 H -0.220 1.220 26 H -0.213 1.213 27 H 0.167 0.833 28 H 0.184 0.816 29 H 0.176 0.824 30 H 0.138 0.862 31 H 0.135 0.865 32 H 0.253 0.747 33 H 0.099 0.901 34 H 0.048 0.952 35 H 0.243 0.757 36 H 0.141 0.859 37 H 0.111 0.889 38 H 0.250 0.750 39 H 0.070 0.930 40 H 0.136 0.864 41 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 5.706 -1.008 -5.164 7.761 hybrid contribution -1.563 -0.498 0.123 1.645 sum 4.143 -1.506 -5.040 6.696 Atomic orbital electron populations 1.86557 1.18658 1.80924 1.50948 1.25286 0.84116 1.13043 0.98193 0.93941 0.89999 0.70673 0.76566 1.19300 0.96954 0.92518 0.95948 1.21182 1.00546 1.00766 0.95096 1.21324 0.97365 0.93330 0.96620 1.21620 1.02492 0.96995 1.01193 1.19224 0.95788 0.82952 0.95368 1.86112 1.71322 1.23293 1.42754 1.22641 1.01635 0.90945 0.88434 1.20367 0.79932 0.87697 0.81662 1.90712 1.39388 1.75223 1.39438 1.45021 1.47635 1.13492 1.26338 1.21435 0.91633 0.82280 0.98451 1.22508 0.94500 0.92370 0.91081 1.86391 1.31317 1.59514 1.61618 1.23968 0.98294 0.99455 0.96811 1.22684 0.85903 0.94182 0.94596 0.88826 1.86466 1.26021 1.58472 1.66561 1.23496 0.97513 0.99653 0.97529 1.20284 1.03805 0.95081 0.97759 0.75462 0.89188 1.22046 1.21321 0.83304 0.81636 0.82414 0.86167 0.86548 0.74678 0.90077 0.95221 0.75736 0.85898 0.88942 0.75046 0.92955 0.86405 0.86978 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.72 12.74 -148.98 -1.90 -5.61 16 2 C -0.10 -0.32 2.81 71.24 0.20 -0.12 16 3 Si 0.78 -0.66 29.79 68.60 2.04 1.38 16 4 C -0.05 -0.31 5.42 -19.88 -0.11 -0.42 16 5 C -0.16 -0.32 8.67 22.28 0.19 -0.13 16 6 C -0.07 0.03 10.04 22.25 0.22 0.25 16 7 C -0.20 -0.38 9.04 22.37 0.20 -0.18 16 8 C 0.11 1.01 6.69 22.51 0.15 1.16 16 9 O -0.32 -3.87 9.67 -73.44 -0.71 -4.58 16 10 C 0.04 0.14 5.22 71.23 0.37 0.51 16 11 C 0.52 4.52 7.46 87.66 0.65 5.18 16 12 O -0.57 -10.57 14.59 15.99 0.23 -10.34 16 13 N -0.67 -1.44 4.33 -420.54 -1.82 -3.26 16 14 C 0.15 0.19 0.83 4.13 0.00 0.19 16 15 C 0.07 0.16 6.26 71.98 0.45 0.61 16 16 O -0.58 -1.37 13.33 -148.98 -1.99 -3.36 16 17 C -0.15 0.83 7.19 31.12 0.22 1.05 16 18 C 0.09 -0.30 5.28 31.12 0.16 -0.14 16 19 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 20 O -0.57 1.25 13.09 -148.98 -1.95 -0.70 16 21 C -0.14 -0.34 6.80 31.12 0.21 -0.13 16 22 C -0.15 -1.65 9.55 22.36 0.21 -1.43 16 23 H 0.39 -0.83 8.74 -74.06 -0.65 -1.48 16 24 H 0.09 0.02 7.96 -2.39 -0.02 0.00 16 25 H -0.29 -1.63 7.11 99.48 0.71 -0.93 16 26 H -0.29 -0.88 7.11 99.48 0.71 -0.17 16 27 H 0.15 -0.43 4.87 -2.91 -0.01 -0.44 16 28 H 0.17 -1.22 8.06 -2.91 -0.02 -1.25 16 29 H 0.16 -0.74 6.30 -2.91 -0.02 -0.76 16 30 H 0.12 -0.34 7.65 -2.38 -0.02 -0.36 16 31 H 0.12 -0.22 7.67 -2.39 -0.02 -0.24 16 32 H 0.42 -1.45 8.66 -92.71 -0.80 -2.25 16 33 H 0.08 -0.27 7.85 -2.39 -0.02 -0.29 16 34 H 0.03 0.24 7.42 -2.39 -0.02 0.22 16 35 H 0.39 -1.79 9.12 -74.06 -0.68 -2.46 16 36 H 0.12 -1.09 7.90 -2.39 -0.02 -1.11 16 37 H 0.09 -0.66 8.09 -2.39 -0.02 -0.68 16 38 H 0.40 -4.44 9.12 -74.05 -0.68 -5.11 16 39 H 0.05 0.55 7.28 -2.39 -0.02 0.54 16 40 H 0.12 -0.14 8.10 -2.39 -0.02 -0.16 16 41 H 0.11 1.54 8.06 -2.91 -0.02 1.51 16 Total: 0.00 -31.61 344.02 -4.59 -36.20 By element: Atomic # 1 Polarization: -14.46 SS G_CDS: -1.65 Total: -16.12 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: 3.16 Total: 6.40 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -1.82 Total: -3.26 kcal Atomic # 8 Polarization: -18.28 SS G_CDS: -6.31 Total: -24.59 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: 2.04 Total: 1.38 kcal Total: -31.61 -4.59 -36.20 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4860298.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.860 kcal (2) G-P(sol) polarization free energy of solvation -31.609 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds