Wall clock time and date at job start Tue Mar 9 2021 12:53:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 C 1.46894 * 110.99776 * 2 1 4 4 C 1.50694 * 109.47318 * 66.04647 * 3 2 1 5 5 O 1.21283 * 120.00179 * 0.02562 * 4 3 2 6 6 N 1.34780 * 120.00364 * 179.97438 * 4 3 2 7 7 C 1.46493 * 120.00617 * 174.63362 * 6 4 3 8 8 C 1.52998 * 112.85119 * 75.46107 * 7 6 4 9 9 O 1.42897 * 109.46915 * 55.35722 * 8 7 6 10 10 C 1.53774 * 113.61906 * 206.77174 * 7 6 4 11 11 C 1.53779 * 87.08656 * 89.11309 * 10 7 6 12 12 H 1.08992 * 113.69360 * 139.98948 * 11 10 7 13 13 O 1.42902 * 113.61538 * 270.89217 * 11 10 7 14 14 C 1.53782 * 113.61328 * 304.27108 * 7 6 4 15 15 C 1.39677 * 110.99964 * 236.04500 * 2 1 3 16 16 C 1.38889 * 120.07143 * 243.95515 * 15 2 1 17 17 C 1.50698 * 120.04023 * 359.97438 * 16 15 2 18 18 O 1.42895 * 109.47006 * 75.02563 * 17 16 15 19 19 Si 1.86302 * 109.46955 * 195.02411 * 17 16 15 20 20 C 1.38125 * 119.92001 * 179.97438 * 16 15 2 21 21 C 1.38268 * 120.07742 * 359.97438 * 20 16 15 22 22 C 1.50699 * 119.92718 * 179.97438 * 21 20 16 23 23 F 1.39896 * 109.47030 * 179.97438 * 22 21 20 24 24 F 1.39898 * 109.47083 * 299.97767 * 22 21 20 25 25 F 1.39903 * 109.47130 * 59.97921 * 22 21 20 26 26 C 1.38308 * 120.14833 * 359.97438 * 21 20 16 27 27 C 1.38081 * 120.07583 * 0.30029 * 26 21 20 28 28 H 1.08999 * 109.46825 * 183.95813 * 1 2 3 29 29 H 1.09003 * 109.47095 * 303.95318 * 1 2 3 30 30 H 1.08995 * 109.47077 * 63.95489 * 1 2 3 31 31 H 1.09006 * 109.47086 * 186.04460 * 3 2 1 32 32 H 1.09004 * 109.47255 * 306.04545 * 3 2 1 33 33 H 0.97005 * 119.99352 * 354.63599 * 6 4 3 34 34 H 1.09002 * 109.47398 * 175.36066 * 8 7 6 35 35 H 1.09001 * 109.47499 * 295.35918 * 8 7 6 36 36 H 0.96703 * 113.99947 * 179.97438 * 9 8 7 37 37 H 1.09002 * 113.61907 * 203.66171 * 10 7 6 38 38 H 1.09003 * 113.61206 * 334.56640 * 10 7 6 39 39 H 0.96703 * 113.99201 * 277.48721 * 13 11 10 40 40 H 1.08998 * 113.61701 * 25.42514 * 14 7 6 41 41 H 1.09000 * 113.61820 * 156.25079 * 14 7 6 42 42 H 1.08996 * 109.46932 * 315.02256 * 17 16 15 43 43 H 0.96702 * 114.00195 * 299.99496 * 18 17 16 44 44 H 1.48495 * 110.00365 * 59.99685 * 19 17 16 45 45 H 1.48493 * 110.00174 * 181.31971 * 19 17 16 46 46 H 1.07999 * 119.96404 * 180.02562 * 20 16 15 47 47 H 1.07999 * 119.95948 * 180.02562 * 26 21 20 48 48 H 1.07999 * 120.04083 * 179.72938 * 27 26 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0471 1.2984 5 8 1.0055 1.4453 2.1411 6 7 2.0188 3.3199 1.5237 7 6 1.5716 4.0158 2.7327 8 6 2.3150 3.5603 3.9899 9 8 3.7222 3.7116 3.7922 10 6 1.5039 5.5439 2.5745 11 6 0.0584 5.3508 2.0866 12 1 -0.6344 6.1046 2.4603 13 8 -0.0476 5.1503 0.6757 14 6 0.0429 4.0440 2.8974 15 6 1.9696 -0.7283 -1.0816 16 6 2.7117 -1.8813 -0.8605 17 6 2.9786 -2.3483 0.5472 18 8 1.7921 -2.9324 1.0883 19 14 4.3439 -3.6159 0.5325 20 6 3.2047 -2.5995 -1.9325 21 6 2.9598 -2.1720 -3.2244 22 6 3.4999 -2.9578 -4.3914 23 9 3.1248 -2.3349 -5.5865 24 9 4.8955 -3.0116 -4.3115 25 9 2.9805 -4.2565 -4.3595 26 6 2.2203 -1.0248 -3.4481 27 6 1.7292 -0.2990 -2.3810 28 1 -0.3633 -1.0252 0.0709 29 1 -0.3633 0.5740 0.8525 30 1 -0.3633 0.4512 -0.9233 31 1 3.0798 1.3444 -0.1082 32 1 1.5611 1.9273 -0.8309 33 1 2.5899 3.7751 0.8852 34 1 1.9999 4.1674 4.8385 35 1 2.0865 2.5130 4.1878 36 1 4.2572 3.4416 4.5511 37 1 1.5777 6.0843 3.5183 38 1 2.1747 5.9337 1.8089 39 1 -0.0384 5.9686 0.1605 40 1 -0.4659 3.2229 2.3923 41 1 -0.2829 4.1728 3.9295 42 1 3.2781 -1.4989 1.1611 43 1 1.0382 -2.3280 1.1264 44 1 5.5835 -3.0209 -0.0281 45 1 4.5950 -4.1078 1.9109 46 1 3.7815 -3.4964 -1.7614 47 1 2.0305 -0.6940 -4.4585 48 1 1.1556 0.5990 -2.5562 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_6406254.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:12 Heat of formation + Delta-G solvation = -232.127414 kcal Electronic energy + Delta-G solvation = -38630.872659 eV Core-core repulsion = 33046.386968 eV Total energy + Delta-G solvation = -5584.485691 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.148 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.19670 -48.72268 -48.65366 -42.00154 -41.41995 -39.66424 -37.69990 -37.61782 -37.44782 -35.86803 -33.95880 -33.02219 -32.11820 -29.65580 -28.42117 -27.58588 -26.96069 -26.95270 -25.17229 -23.77583 -23.12281 -22.09425 -21.50659 -20.32409 -19.51723 -19.50918 -19.48795 -18.55108 -18.31168 -18.21970 -18.13748 -17.70418 -16.99100 -16.80184 -16.62478 -16.36909 -16.10256 -15.99893 -15.57922 -15.55182 -15.37589 -15.25715 -15.17639 -15.09492 -15.02004 -14.84787 -14.81279 -14.63260 -14.53925 -14.23639 -14.05767 -13.71549 -13.61662 -13.44341 -13.24892 -13.15762 -12.99252 -12.84250 -12.71595 -12.58011 -12.21140 -12.12139 -11.45550 -11.42389 -11.22506 -11.14021 -10.93240 -10.64383 -10.24100 -10.11179 -9.93590 -9.68413 -4.97968 -0.38377 -0.00288 1.29279 1.53974 1.58809 1.63225 1.89322 1.90364 2.15724 2.60960 2.71107 2.93740 3.00874 3.12867 3.36151 3.47643 3.51033 3.57150 3.64093 3.67091 3.81649 3.83827 4.00300 4.02170 4.04707 4.14022 4.19226 4.24886 4.30544 4.39657 4.42994 4.44201 4.49663 4.60409 4.61174 4.65236 4.81617 4.85602 4.86963 4.95749 4.98096 5.01352 5.05858 5.12425 5.36541 5.52055 5.63224 6.05662 6.55169 6.56670 6.73858 6.87149 7.27699 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.503 5.503 3 C 0.042 3.958 4 C 0.520 3.480 5 O -0.555 6.555 6 N -0.685 5.685 7 C 0.154 3.846 8 C 0.076 3.924 9 O -0.582 6.582 10 C -0.152 4.152 11 C 0.085 3.915 12 H 0.089 0.911 13 O -0.564 6.564 14 C -0.135 4.135 15 C 0.128 3.872 16 C -0.099 4.099 17 C -0.067 4.067 18 O -0.544 6.544 19 Si 0.787 3.213 20 C -0.060 4.060 21 C -0.184 4.184 22 C 0.510 3.490 23 F -0.177 7.177 24 F -0.180 7.180 25 F -0.177 7.177 26 C -0.054 4.054 27 C -0.140 4.140 28 H 0.075 0.925 29 H 0.080 0.920 30 H 0.044 0.956 31 H 0.112 0.888 32 H 0.094 0.906 33 H 0.410 0.590 34 H 0.072 0.928 35 H 0.032 0.968 36 H 0.393 0.607 37 H 0.115 0.885 38 H 0.085 0.915 39 H 0.397 0.603 40 H 0.062 0.938 41 H 0.114 0.886 42 H 0.072 0.928 43 H 0.372 0.628 44 H -0.259 1.259 45 H -0.293 1.293 46 H 0.152 0.848 47 H 0.159 0.841 48 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.186 7.938 -0.817 8.067 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 N -0.224 5.224 3 C -0.087 4.087 4 C 0.306 3.694 5 O -0.433 6.433 6 N -0.336 5.336 7 C 0.066 3.934 8 C -0.003 4.003 9 O -0.390 6.390 10 C -0.190 4.190 11 C 0.026 3.974 12 H 0.107 0.893 13 O -0.372 6.372 14 C -0.173 4.173 15 C 0.034 3.966 16 C -0.101 4.101 17 C -0.176 4.176 18 O -0.351 6.351 19 Si 0.689 3.311 20 C -0.078 4.078 21 C -0.186 4.186 22 C 0.456 3.544 23 F -0.158 7.158 24 F -0.161 7.161 25 F -0.159 7.159 26 C -0.073 4.073 27 C -0.160 4.160 28 H 0.094 0.906 29 H 0.098 0.902 30 H 0.063 0.937 31 H 0.130 0.870 32 H 0.112 0.888 33 H 0.246 0.754 34 H 0.090 0.910 35 H 0.050 0.950 36 H 0.242 0.758 37 H 0.133 0.867 38 H 0.104 0.896 39 H 0.247 0.753 40 H 0.081 0.919 41 H 0.133 0.867 42 H 0.090 0.910 43 H 0.221 0.779 44 H -0.185 1.185 45 H -0.220 1.220 46 H 0.169 0.831 47 H 0.176 0.824 48 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -0.550 6.168 0.126 6.194 hybrid contribution -0.273 2.136 -0.143 2.158 sum -0.823 8.305 -0.017 8.345 Atomic orbital electron populations 1.22606 0.83842 1.03480 1.02062 1.59187 1.09980 1.12966 1.40301 1.22060 1.02771 0.88298 0.95605 1.20544 0.78788 0.81404 0.88657 1.90664 1.41107 1.64467 1.47052 1.45261 1.52019 1.12828 1.23523 1.21287 0.93799 0.93721 0.84548 1.22488 0.81417 0.99509 0.96928 1.86395 1.17389 1.89494 1.45675 1.23901 0.98091 0.93000 1.03995 1.22678 0.95868 0.96958 0.81899 0.89313 1.86443 1.96322 1.37511 1.16885 1.23386 0.94351 0.98114 1.01484 1.18896 0.95201 0.93158 0.89352 1.20181 0.98856 0.95127 0.95917 1.25356 0.96510 1.05331 0.90362 1.86674 1.21521 1.41872 1.84989 0.92582 0.72886 0.83642 0.82006 1.20775 0.97600 0.98936 0.90501 1.19978 1.06465 0.99739 0.92401 1.18297 0.75613 0.77890 0.82617 1.93174 1.91157 1.82321 1.49164 1.93230 1.30163 1.96366 1.96347 1.93239 1.86567 1.39465 1.96590 1.21151 0.93069 0.91679 1.01378 1.21858 1.00972 1.01564 0.91585 0.90634 0.90186 0.93741 0.87036 0.88826 0.75400 0.90964 0.94985 0.75785 0.86701 0.89642 0.75290 0.91897 0.86731 0.91006 0.77907 1.18462 1.22042 0.83136 0.82368 0.82667 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 8.75 127.69 1.12 1.12 16 2 N -0.50 -0.21 3.22 -724.43 -2.33 -2.54 16 3 C 0.04 -0.08 5.03 85.56 0.43 0.35 16 4 C 0.52 1.51 7.03 87.65 0.62 2.13 16 5 O -0.55 -5.37 12.25 -3.04 -0.04 -5.41 16 6 N -0.68 0.35 4.50 -420.56 -1.89 -1.54 16 7 C 0.15 -0.11 0.76 4.13 0.00 -0.11 16 8 C 0.08 0.04 6.42 71.98 0.46 0.50 16 9 O -0.58 -0.49 13.54 -148.98 -2.02 -2.50 16 10 C -0.15 0.84 7.23 31.12 0.22 1.06 16 11 C 0.09 -0.40 5.28 31.12 0.16 -0.23 16 12 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 13 O -0.56 2.15 13.09 -148.98 -1.95 0.20 16 14 C -0.14 0.03 6.71 31.12 0.21 0.24 16 15 C 0.13 -0.02 4.62 38.21 0.18 0.16 16 16 C -0.10 -0.19 5.28 -19.74 -0.10 -0.30 16 17 C -0.07 -0.29 2.30 71.24 0.16 -0.13 16 18 O -0.54 -3.62 12.65 -148.98 -1.89 -5.51 16 19 Si 0.79 2.38 30.18 68.60 2.07 4.45 16 20 C -0.06 -0.06 8.20 22.25 0.18 0.13 16 21 C -0.18 -0.08 5.37 -19.84 -0.11 -0.18 16 22 C 0.51 1.06 3.31 71.24 0.24 1.30 16 23 F -0.18 -0.39 15.96 44.97 0.72 0.33 16 24 F -0.18 -0.67 17.24 44.97 0.78 0.10 16 25 F -0.18 -0.64 17.24 44.97 0.78 0.13 16 26 C -0.05 0.14 9.42 22.25 0.21 0.35 16 27 C -0.14 0.49 8.66 22.40 0.19 0.68 16 28 H 0.07 -0.02 7.42 -2.39 -0.02 -0.04 16 29 H 0.08 0.36 5.83 -2.39 -0.01 0.35 16 30 H 0.04 -0.12 7.35 -2.39 -0.02 -0.13 16 31 H 0.11 -0.37 8.06 -2.38 -0.02 -0.39 16 32 H 0.09 -0.56 7.47 -2.39 -0.02 -0.58 16 33 H 0.41 -1.64 8.75 -92.70 -0.81 -2.45 16 34 H 0.07 -0.25 8.09 -2.39 -0.02 -0.27 16 35 H 0.03 0.18 7.51 -2.39 -0.02 0.16 16 36 H 0.39 -2.32 9.12 -74.06 -0.68 -3.00 16 37 H 0.11 -0.89 8.06 -2.39 -0.02 -0.91 16 38 H 0.08 -0.52 8.13 -2.39 -0.02 -0.54 16 39 H 0.40 -4.67 9.12 -74.06 -0.68 -5.35 16 40 H 0.06 0.39 6.72 -2.39 -0.02 0.37 16 41 H 0.11 -0.36 8.10 -2.39 -0.02 -0.38 16 42 H 0.07 0.45 7.78 -2.39 -0.02 0.43 16 43 H 0.37 1.66 7.51 -74.06 -0.56 1.10 16 44 H -0.26 -1.22 7.11 99.48 0.71 -0.51 16 45 H -0.29 -2.91 7.11 99.48 0.71 -2.20 16 46 H 0.15 -0.25 5.13 -2.91 -0.01 -0.27 16 47 H 0.16 -0.94 7.15 -2.91 -0.02 -0.96 16 48 H 0.16 -1.19 7.14 -2.91 -0.02 -1.21 16 Total: 0.00 -19.49 401.03 -3.19 -22.69 By element: Atomic # 1 Polarization: -15.88 SS G_CDS: -1.60 Total: -17.47 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: 4.18 Total: 7.07 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -4.23 Total: -4.08 kcal Atomic # 8 Polarization: -7.32 SS G_CDS: -5.89 Total: -13.21 kcal Atomic # 9 Polarization: -1.71 SS G_CDS: 2.27 Total: 0.56 kcal Atomic # 14 Polarization: 2.38 SS G_CDS: 2.07 Total: 4.45 kcal Total: -19.49 -3.19 -22.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_6406254.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -209.441 kcal (2) G-P(sol) polarization free energy of solvation -19.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.687 kcal (6) G-S(sol) free energy of system = (1) + (5) -232.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds