Wall clock time and date at job start Tue Mar 9 2021 12:54:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42894 * 113.99950 * 2 1 4 4 H 1.09007 * 112.91059 * 341.24391 * 3 2 1 5 5 C 1.53777 * 113.61763 * 112.50388 * 3 2 1 6 6 C 1.53780 * 87.08559 * 139.97959 * 5 3 2 7 7 C 1.53002 * 113.61420 * 89.11481 * 6 5 3 8 8 O 1.42891 * 109.47181 * 86.46998 * 7 6 5 9 9 N 1.46501 * 113.69103 * 220.01126 * 6 5 3 10 10 C 1.34773 * 120.00039 * 163.25565 * 9 6 5 11 11 O 1.21574 * 119.99943 * 4.92928 * 10 9 6 12 12 C 1.47693 * 120.00059 * 184.93555 * 10 9 6 13 13 C 1.39806 * 120.15761 * 179.97438 * 12 10 9 14 14 F 1.35101 * 120.07889 * 359.97438 * 13 12 10 15 15 C 1.38315 * 119.83354 * 179.97438 * 13 12 10 16 16 C 1.38182 * 120.14231 * 359.97438 * 15 13 12 17 17 C 1.50705 * 119.83919 * 180.02562 * 16 15 13 18 18 O 1.42898 * 109.47010 * 15.00384 * 17 16 15 19 19 Si 1.86306 * 109.46821 * 134.99883 * 17 16 15 20 20 C 1.38651 * 120.31672 * 359.97438 * 16 15 13 21 21 F 1.35106 * 119.91432 * 180.02562 * 20 16 15 22 22 C 1.38062 * 120.16898 * 359.76391 * 20 16 15 23 23 C 1.53779 * 113.61245 * 210.00080 * 3 2 1 24 24 H 1.09003 * 109.47417 * 60.00302 * 1 2 3 25 25 H 1.09000 * 109.47513 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47887 * 300.00398 * 1 2 3 27 27 H 1.08995 * 113.61517 * 25.42331 * 5 3 2 28 28 H 1.09006 * 113.60930 * 254.53141 * 5 3 2 29 29 H 1.08997 * 109.47129 * 326.46964 * 7 6 5 30 30 H 1.09002 * 109.46686 * 206.47193 * 7 6 5 31 31 H 0.96693 * 114.00385 * 179.97438 * 8 7 6 32 32 H 0.96993 * 119.99488 * 343.24720 * 9 6 5 33 33 H 1.07999 * 119.92624 * 180.02562 * 15 13 12 34 34 H 1.08996 * 109.47128 * 255.00234 * 17 16 15 35 35 H 0.96696 * 114.00273 * 59.99487 * 18 17 16 36 36 H 1.48496 * 110.00000 * 58.68534 * 19 17 16 37 37 H 1.48503 * 109.99576 * 179.97438 * 19 17 16 38 38 H 1.07998 * 120.08074 * 180.27532 * 22 20 16 39 39 H 1.09003 * 113.61591 * 105.47066 * 23 3 2 40 40 H 1.08995 * 113.61424 * 334.56663 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3142 2.0798 -0.3229 5 6 2.7534 1.6489 1.3017 6 6 3.8227 2.3181 0.4222 7 6 3.5413 3.7936 0.1311 8 8 4.0720 4.5970 1.1870 9 7 5.1941 2.0798 0.8789 10 6 6.2302 2.3050 0.0470 11 8 6.0343 2.7901 -1.0504 12 6 7.6036 1.9622 0.4683 13 6 8.6808 2.1938 -0.3924 14 9 8.4684 2.7319 -1.6133 15 6 9.9643 1.8707 0.0093 16 6 10.1828 1.3208 1.2580 17 6 11.5842 0.9719 1.6889 18 8 12.5223 1.6056 0.8168 19 14 11.8623 1.5618 3.4341 20 6 9.1192 1.0895 2.1168 21 9 9.3423 0.5520 3.3361 22 6 7.8333 1.4121 1.7313 23 6 3.3755 1.3718 -0.7045 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3635 0.5139 0.8899 27 1 3.1165 0.7741 1.8410 28 1 2.2139 2.3477 1.9411 29 1 2.4651 3.9512 0.0605 30 1 4.0122 4.0743 -0.8110 31 1 3.9301 5.5461 1.0684 32 1 5.3564 1.7602 1.7802 33 1 10.7975 2.0494 -0.6542 34 1 11.7195 -0.1087 1.6446 35 1 12.4591 2.5704 0.8054 36 1 10.8724 0.9344 4.3460 37 1 13.2405 1.2232 3.8710 38 1 7.0064 1.2354 2.4031 39 1 3.3383 1.8470 -1.6848 40 1 3.9087 0.4212 -0.7138 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_12360598.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:17 Heat of formation + Delta-G solvation = -168.663728 kcal Electronic energy + Delta-G solvation = -28996.424003 eV Core-core repulsion = 24416.183048 eV Total energy + Delta-G solvation = -4580.240955 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.116 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -50.43050 -49.91214 -41.88609 -40.64236 -39.50692 -38.04885 -37.64048 -36.70418 -34.51211 -32.78897 -31.42137 -28.88897 -27.85090 -27.34733 -26.91583 -24.71104 -24.22287 -23.26858 -21.72942 -20.26029 -19.59482 -19.05221 -18.66560 -18.45001 -18.04858 -17.69568 -17.44505 -17.16121 -16.88295 -16.60966 -16.24153 -16.09672 -16.07865 -15.80687 -15.73767 -15.70644 -15.45488 -15.04759 -14.87473 -14.37771 -14.11354 -13.73075 -13.69836 -13.51827 -13.29161 -13.10851 -12.96173 -12.74858 -12.59019 -12.48019 -11.96319 -11.81787 -11.51018 -11.21168 -11.03428 -10.68874 -10.56687 -10.27813 -10.14253 -9.69249 -5.09549 -0.74026 -0.29251 1.08522 1.54408 1.60286 1.84832 1.95178 2.37061 2.74067 2.79656 2.85884 2.91430 3.08461 3.13404 3.17790 3.41368 3.46562 3.55097 3.62829 3.78830 3.87165 4.09969 4.12366 4.27650 4.30543 4.34856 4.38305 4.38373 4.54963 4.56833 4.63579 4.66977 4.70742 4.72826 4.75010 4.83012 4.91153 4.95227 5.39347 5.43356 6.14043 6.29894 6.37600 6.58351 7.12228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.064 3.936 4 H 0.094 0.906 5 C -0.151 4.151 6 C 0.159 3.841 7 C 0.084 3.916 8 O -0.566 6.566 9 N -0.698 5.698 10 C 0.566 3.434 11 O -0.514 6.514 12 C -0.148 4.148 13 C 0.161 3.839 14 F -0.106 7.106 15 C -0.126 4.126 16 C -0.092 4.092 17 C -0.071 4.071 18 O -0.535 6.535 19 Si 0.687 3.313 20 C 0.074 3.926 21 F -0.118 7.118 22 C -0.084 4.084 23 C -0.130 4.130 24 H 0.044 0.956 25 H 0.088 0.912 26 H 0.043 0.957 27 H 0.100 0.900 28 H 0.084 0.916 29 H 0.055 0.945 30 H 0.067 0.933 31 H 0.383 0.617 32 H 0.402 0.598 33 H 0.163 0.837 34 H 0.130 0.870 35 H 0.382 0.618 36 H -0.226 1.226 37 H -0.257 1.257 38 H 0.151 0.849 39 H 0.085 0.915 40 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.789 2.544 2.755 4.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.189 4.189 6 C 0.072 3.928 7 C 0.005 3.995 8 O -0.371 6.371 9 N -0.350 5.350 10 C 0.352 3.648 11 O -0.390 6.390 12 C -0.152 4.152 13 C 0.140 3.860 14 F -0.084 7.084 15 C -0.144 4.144 16 C -0.094 4.094 17 C -0.181 4.181 18 O -0.340 6.340 19 Si 0.586 3.414 20 C 0.055 3.945 21 F -0.097 7.097 22 C -0.103 4.103 23 C -0.169 4.169 24 H 0.063 0.937 25 H 0.106 0.894 26 H 0.062 0.938 27 H 0.119 0.881 28 H 0.102 0.898 29 H 0.073 0.927 30 H 0.086 0.914 31 H 0.230 0.770 32 H 0.238 0.762 33 H 0.180 0.820 34 H 0.147 0.853 35 H 0.231 0.769 36 H -0.149 1.149 37 H -0.181 1.181 38 H 0.168 0.832 39 H 0.104 0.896 40 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -2.307 1.278 2.892 3.914 hybrid contribution -0.530 0.083 -0.230 0.584 sum -2.837 1.361 2.662 4.122 Atomic orbital electron populations 1.22849 0.80667 1.03191 1.00160 1.87962 1.20061 1.26592 1.94493 1.23553 0.93930 0.85975 0.96044 0.88867 1.23847 0.96226 1.01145 0.97722 1.21390 0.81006 0.93362 0.97001 1.22265 0.97259 0.88819 0.91161 1.86423 1.82341 1.21644 1.46686 1.45540 1.04856 1.68093 1.16553 1.17765 0.83751 0.78383 0.84858 1.90846 1.84875 1.42284 1.21018 1.19871 0.93964 1.06265 0.95121 1.17616 0.92486 0.94644 0.81219 1.91646 1.95439 1.82113 1.39177 1.20838 0.96217 1.01021 0.96369 1.20430 0.96278 0.98871 0.93784 1.25148 0.84839 1.01664 1.06409 1.86527 1.56375 1.24854 1.66249 0.95144 0.81041 0.90843 0.74380 1.17215 0.93386 1.01623 0.82290 1.91600 1.94438 1.83746 1.39895 1.21123 0.96245 0.97553 0.95419 1.23595 0.94853 1.00005 0.98418 0.93739 0.89368 0.93810 0.88126 0.89757 0.92651 0.91437 0.77012 0.76185 0.81967 0.85326 0.76946 1.14929 1.18148 0.83185 0.89607 0.88102 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.48 10.71 -35.23 -0.38 -0.86 16 3 C 0.06 -0.03 3.96 -25.92 -0.10 -0.13 16 4 H 0.09 -0.19 7.43 -51.92 -0.39 -0.58 16 5 C -0.15 0.17 7.17 -25.92 -0.19 -0.02 16 6 C 0.16 0.01 0.93 -131.00 -0.12 -0.11 16 7 C 0.08 0.00 6.06 37.16 0.23 0.22 16 8 O -0.57 -0.15 13.34 -35.23 -0.47 -0.62 16 9 N -0.70 -0.15 4.88 -47.83 -0.23 -0.39 16 10 C 0.57 1.47 7.43 -12.40 -0.09 1.37 16 11 O -0.51 -2.97 13.77 5.30 0.07 -2.89 16 12 C -0.15 -0.16 5.88 -104.92 -0.62 -0.78 16 13 C 0.16 0.26 7.28 -38.97 -0.28 -0.02 16 14 F -0.11 -0.43 15.55 2.25 0.04 -0.40 16 15 C -0.13 0.07 9.20 -39.57 -0.36 -0.29 16 16 C -0.09 0.08 5.14 -104.49 -0.54 -0.45 16 17 C -0.07 0.09 2.96 36.01 0.11 0.20 16 18 O -0.53 0.72 11.63 -35.23 -0.41 0.31 16 19 Si 0.69 -1.04 30.81 -169.99 -5.24 -6.27 16 20 C 0.07 -0.04 6.65 -39.49 -0.26 -0.30 16 21 F -0.12 -0.06 12.80 2.25 0.03 -0.03 16 22 C -0.08 0.08 9.51 -39.11 -0.37 -0.29 16 23 C -0.13 -0.08 6.69 -25.92 -0.17 -0.25 16 24 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.14 8.10 -51.93 -0.42 -0.56 16 29 H 0.06 -0.11 7.38 -51.93 -0.38 -0.49 16 30 H 0.07 0.11 7.16 -51.93 -0.37 -0.27 16 31 H 0.38 -1.29 9.12 45.56 0.42 -0.88 16 32 H 0.40 -0.80 6.75 -40.82 -0.28 -1.08 16 33 H 0.16 -0.31 7.06 -52.49 -0.37 -0.68 16 34 H 0.13 -0.12 7.96 -51.93 -0.41 -0.54 16 35 H 0.38 -2.06 8.42 45.56 0.38 -1.67 16 36 H -0.23 -0.16 5.26 56.52 0.30 0.13 16 37 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 38 H 0.15 -0.51 6.42 -52.49 -0.34 -0.85 16 39 H 0.09 0.08 8.10 -51.93 -0.42 -0.34 16 40 H 0.10 0.16 8.14 -51.93 -0.42 -0.26 16 LS Contribution 340.16 15.07 5.13 5.13 Total: 0.00 -8.94 340.16 -7.14 -16.08 By element: Atomic # 1 Polarization: -6.27 SS G_CDS: -3.99 Total: -10.26 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -1.68 Total: 0.21 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.23 Total: -0.39 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -1.18 Total: -4.06 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.06 Total: -0.43 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.24 Total: -6.27 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -8.94 -7.14 -16.08 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_12360598.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.583 kcal (2) G-P(sol) polarization free energy of solvation -8.939 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.522 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.664 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds