Wall clock time and date at job start Tue Mar 9 2021 12:54:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42905 * 114.00005 * 2 1 4 4 H 1.09000 * 112.84797 * 18.80754 * 3 2 1 5 5 C 1.53783 * 113.61354 * 149.99942 * 3 2 1 6 6 C 1.53780 * 87.07579 * 89.20144 * 5 3 2 7 7 C 1.53001 * 113.61219 * 140.06901 * 6 5 3 8 8 O 1.42896 * 109.47105 * 186.24697 * 7 6 5 9 9 N 1.46505 * 113.61563 * 270.87918 * 6 5 3 10 10 C 1.34772 * 119.99990 * 285.90421 * 9 6 5 11 11 O 1.21283 * 120.00304 * 5.37924 * 10 9 6 12 12 C 1.50702 * 119.99827 * 185.38306 * 10 9 6 13 13 N 1.46499 * 109.47192 * 179.97438 * 12 10 9 14 14 C 1.35045 * 125.93303 * 124.99689 * 13 12 10 15 15 C 1.35080 * 107.98055 * 179.97438 * 14 13 12 16 16 C 1.50701 * 126.07409 * 179.97438 * 15 14 13 17 17 O 1.42901 * 109.46750 * 103.98043 * 16 15 14 18 18 Si 1.86297 * 109.47307 * 343.97580 * 16 15 14 19 19 C 1.40847 * 107.85069 * 0.02562 * 15 14 13 20 20 C 1.48418 * 126.04030 * 180.02562 * 19 15 14 21 21 C 1.39329 * 120.11910 * 319.31156 * 20 19 15 22 22 C 1.38017 * 119.87885 * 179.72192 * 21 20 19 23 23 C 1.38321 * 120.11998 * 0.57846 * 22 21 20 24 24 C 1.38317 * 120.24124 * 359.69043 * 23 22 21 25 25 C 1.38022 * 120.11828 * 0.02562 * 24 23 22 26 26 N 1.31627 * 107.92035 * 359.71458 * 19 15 14 27 27 C 1.53774 * 87.17846 * 25.47242 * 6 5 3 28 28 H 1.09003 * 109.46619 * 299.99981 * 1 2 3 29 29 H 1.08995 * 109.47343 * 59.99564 * 1 2 3 30 30 H 1.08997 * 109.47044 * 180.02562 * 1 2 3 31 31 H 1.08999 * 113.61312 * 334.65361 * 5 3 2 32 32 H 1.08994 * 113.61083 * 203.74629 * 5 3 2 33 33 H 1.08997 * 109.46964 * 306.24468 * 7 6 5 34 34 H 1.08996 * 109.47421 * 66.24579 * 7 6 5 35 35 H 0.96703 * 114.00675 * 179.97438 * 8 7 6 36 36 H 0.97002 * 119.99924 * 105.89479 * 9 6 5 37 37 H 1.09005 * 109.47169 * 59.99743 * 12 10 9 38 38 H 1.09002 * 109.47358 * 299.99578 * 12 10 9 39 39 H 1.08002 * 126.00836 * 0.02562 * 14 13 12 40 40 H 1.09010 * 109.46982 * 223.97607 * 16 15 14 41 41 H 0.96704 * 113.99721 * 180.02562 * 17 16 15 42 42 H 1.48505 * 109.99574 * 59.99811 * 18 16 15 43 43 H 1.48494 * 110.00273 * 181.31682 * 18 16 15 44 44 H 1.08002 * 120.05936 * 359.97438 * 21 20 19 45 45 H 1.08003 * 119.94112 * 180.27192 * 22 21 20 46 46 H 1.07995 * 119.87833 * 179.72103 * 23 22 21 47 47 H 1.07997 * 119.94497 * 180.02562 * 24 23 22 48 48 H 1.08002 * 120.06189 * 180.02562 * 25 24 23 49 49 H 1.09003 * 113.61240 * 89.07235 * 27 6 5 50 50 H 1.09000 * 113.61903 * 219.97891 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0789 0.3238 5 6 3.3756 1.3719 0.7045 6 6 4.0062 1.0353 -0.6570 7 6 5.2916 1.8131 -0.9462 8 8 5.7207 1.5443 -2.2824 9 7 4.1448 -0.4028 -0.9002 10 6 5.0987 -1.1059 -0.2584 11 8 5.7782 -0.5705 0.5917 12 6 5.3213 -2.5574 -0.5971 13 7 6.4050 -3.0916 0.2314 14 6 6.3300 -4.1778 1.0304 15 6 7.5325 -4.3432 1.6231 16 6 7.8993 -5.4330 2.5971 17 8 8.7013 -6.4132 1.9352 18 14 6.3476 -6.2348 3.2453 19 6 8.3823 -3.3154 1.1699 20 6 9.7985 -3.1149 1.5661 21 6 10.1867 -3.3005 2.8913 22 6 11.5061 -3.1184 3.2531 23 6 12.4400 -2.7405 2.3053 24 6 12.0590 -2.5494 0.9894 25 6 10.7433 -2.7346 0.6155 26 7 7.7005 -2.5680 0.3278 27 6 2.7545 1.6516 -1.3036 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 3.5176 0.5949 1.4556 32 1 3.6305 2.3667 1.0697 33 1 5.1035 2.8807 -0.8328 34 1 6.0682 1.5047 -0.2463 35 1 6.5320 2.0057 -2.5354 36 1 3.5497 -0.8489 -1.5230 37 1 5.5905 -2.6478 -1.6495 38 1 4.4069 -3.1194 -0.4065 39 1 5.4616 -4.8044 1.1703 40 1 8.4609 -5.0045 3.4273 41 1 8.9745 -7.1467 2.5032 42 1 5.5730 -6.8228 2.1230 43 1 6.6946 -7.2900 4.2308 44 1 9.4574 -3.5904 3.6332 45 1 11.8090 -3.2663 4.2792 46 1 13.4705 -2.5947 2.5936 47 1 12.7922 -2.2548 0.2532 48 1 10.4469 -2.5855 -0.4123 49 1 2.8400 2.7228 -1.4864 50 1 2.3955 1.1002 -2.1726 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_12622748.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:25 Heat of formation + Delta-G solvation = -0.362793 kcal Electronic energy + Delta-G solvation = -34885.222404 eV Core-core repulsion = 30269.044377 eV Total energy + Delta-G solvation = -4616.178028 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.33223 -41.67306 -39.79877 -39.42452 -37.89727 -37.62777 -36.56403 -34.68568 -33.95079 -32.22331 -31.75041 -31.24964 -29.24848 -28.33491 -27.42775 -26.90908 -25.86828 -24.26537 -23.39177 -23.19134 -21.84306 -21.35664 -20.66200 -20.28972 -18.50784 -18.33706 -18.23866 -18.11511 -17.61018 -17.40636 -16.76897 -16.61137 -16.48464 -16.18379 -15.98919 -15.89949 -15.60154 -15.47420 -15.06126 -14.91878 -14.86493 -14.59398 -14.24530 -14.11763 -14.04134 -13.79429 -13.70551 -13.50913 -13.41249 -13.36076 -13.20064 -12.77824 -12.58809 -12.24765 -12.21847 -12.03329 -12.00894 -11.80520 -11.51243 -11.38644 -11.16865 -10.72937 -10.64533 -10.36376 -10.13388 -9.92479 -9.65886 -9.56808 -9.08473 -4.90428 0.33752 0.68235 0.96100 1.29925 1.40415 1.62210 1.65053 1.90150 2.00988 2.11742 2.57227 3.01722 3.11238 3.36701 3.40524 3.51867 3.60306 3.67874 3.74940 3.79777 3.90309 4.01450 4.04396 4.07517 4.23680 4.26029 4.27978 4.34624 4.36813 4.38607 4.43491 4.46358 4.54301 4.60200 4.64884 4.70202 4.73001 4.74552 4.78993 4.92242 4.97677 5.00950 5.01986 5.17873 5.30069 5.49267 5.58543 5.76547 5.78876 5.83124 5.96733 6.12261 6.22027 6.54248 6.63752 6.69199 6.82392 7.27954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.366 6.366 3 C 0.062 3.938 4 H 0.080 0.920 5 C -0.139 4.139 6 C 0.169 3.831 7 C 0.072 3.928 8 O -0.568 6.568 9 N -0.691 5.691 10 C 0.508 3.492 11 O -0.507 6.507 12 C 0.116 3.884 13 N -0.355 5.355 14 C 0.066 3.934 15 C -0.204 4.204 16 C -0.035 4.035 17 O -0.533 6.533 18 Si 0.676 3.324 19 C 0.128 3.872 20 C -0.003 4.003 21 C -0.097 4.097 22 C -0.121 4.121 23 C -0.115 4.115 24 C -0.121 4.121 25 C -0.092 4.092 26 N -0.246 5.246 27 C -0.151 4.151 28 H 0.044 0.956 29 H 0.043 0.957 30 H 0.088 0.912 31 H 0.087 0.913 32 H 0.103 0.897 33 H 0.053 0.947 34 H 0.067 0.933 35 H 0.380 0.620 36 H 0.405 0.595 37 H 0.117 0.883 38 H 0.127 0.873 39 H 0.177 0.823 40 H 0.073 0.927 41 H 0.375 0.625 42 H -0.254 1.254 43 H -0.259 1.259 44 H 0.126 0.874 45 H 0.125 0.875 46 H 0.123 0.877 47 H 0.124 0.876 48 H 0.123 0.877 49 H 0.105 0.895 50 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.474 1.794 0.531 5.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.285 6.285 3 C 0.004 3.996 4 H 0.098 0.902 5 C -0.177 4.177 6 C 0.081 3.919 7 C -0.007 4.007 8 O -0.373 6.373 9 N -0.343 5.343 10 C 0.292 3.708 11 O -0.380 6.380 12 C -0.009 4.009 13 N -0.136 5.136 14 C -0.079 4.079 15 C -0.215 4.215 16 C -0.146 4.146 17 O -0.339 6.339 18 Si 0.577 3.423 19 C -0.038 4.038 20 C -0.005 4.005 21 C -0.116 4.116 22 C -0.139 4.139 23 C -0.134 4.134 24 C -0.139 4.139 25 C -0.111 4.111 26 N -0.066 5.066 27 C -0.189 4.189 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.106 0.894 31 H 0.106 0.894 32 H 0.122 0.878 33 H 0.072 0.928 34 H 0.085 0.915 35 H 0.227 0.773 36 H 0.240 0.760 37 H 0.135 0.865 38 H 0.145 0.855 39 H 0.194 0.806 40 H 0.091 0.909 41 H 0.222 0.778 42 H -0.179 1.179 43 H -0.184 1.184 44 H 0.144 0.856 45 H 0.143 0.857 46 H 0.141 0.859 47 H 0.142 0.858 48 H 0.141 0.859 49 H 0.123 0.877 50 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -6.103 2.368 -0.164 6.548 hybrid contribution 0.747 -1.078 -0.007 1.311 sum -5.356 1.290 -0.171 5.512 Atomic orbital electron populations 1.22850 0.80541 1.03056 1.00237 1.87874 1.19902 1.26185 1.94504 1.23150 0.94622 0.85656 0.96186 0.90183 1.23559 0.93643 1.03587 0.96939 1.21100 0.93492 0.80814 0.96448 1.22465 0.96334 0.97288 0.84571 1.86429 1.47165 1.73699 1.30050 1.45262 1.35102 1.07645 1.46327 1.20348 0.80335 0.88190 0.81927 1.90778 1.45931 1.70424 1.30886 1.21505 0.89152 0.93787 0.96461 1.47781 1.09260 1.21533 1.35040 1.22205 0.99853 0.91572 0.94262 1.19221 0.93504 1.00711 1.08096 1.24076 1.03625 0.90723 0.96195 1.86653 1.70323 1.36222 1.40738 0.95300 0.80585 0.85117 0.81306 1.20577 0.93642 0.93608 0.95960 1.17717 0.88505 1.00665 0.93637 1.21149 0.96291 0.99312 0.94855 1.21063 0.92898 1.00207 0.99701 1.21239 0.99662 0.99149 0.93315 1.21096 0.95842 1.00446 0.96476 1.21191 0.92730 0.97917 0.99302 1.77784 0.88712 1.19748 1.20355 1.23822 0.94591 1.02132 0.98359 0.93779 0.93826 0.89371 0.89427 0.87839 0.92845 0.91523 0.77311 0.76009 0.86505 0.85499 0.80576 0.90895 0.77806 1.17890 1.18357 0.85618 0.85680 0.85924 0.85779 0.85893 0.87655 0.89848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.85 101.05 1.10 1.03 16 2 O -0.37 0.11 10.14 -35.23 -0.36 -0.25 16 3 C 0.06 -0.07 4.38 -25.78 -0.11 -0.18 16 4 H 0.08 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.14 0.00 6.95 -25.92 -0.18 -0.18 16 6 C 0.17 0.06 0.75 -131.01 -0.10 -0.04 16 7 C 0.07 0.08 6.10 37.16 0.23 0.31 16 8 O -0.57 -0.87 13.53 -35.23 -0.48 -1.35 16 9 N -0.69 -0.15 4.57 -46.86 -0.21 -0.37 16 10 C 0.51 1.13 7.49 -10.99 -0.08 1.05 16 11 O -0.51 -3.17 13.79 5.55 0.08 -3.09 16 12 C 0.12 -0.02 6.99 -5.19 -0.04 -0.05 16 13 N -0.35 -1.21 3.40 -62.58 -0.21 -1.42 16 14 C 0.07 0.15 9.96 -17.26 -0.17 -0.02 16 15 C -0.20 -0.77 5.37 -104.76 -0.56 -1.33 16 16 C -0.04 -0.06 2.49 36.01 0.09 0.03 16 17 O -0.53 -1.50 12.86 -35.23 -0.45 -1.95 16 18 Si 0.68 -0.18 30.81 -169.99 -5.24 -5.41 16 19 C 0.13 0.74 6.68 -82.77 -0.55 0.19 16 20 C 0.00 -0.02 5.76 -104.89 -0.60 -0.62 16 21 C -0.10 -0.32 8.90 -39.26 -0.35 -0.67 16 22 C -0.12 -0.26 10.03 -39.63 -0.40 -0.65 16 23 C -0.12 -0.25 10.04 -39.52 -0.40 -0.65 16 24 C -0.12 -0.35 10.03 -39.63 -0.40 -0.75 16 25 C -0.09 -0.43 9.77 -39.26 -0.38 -0.81 16 26 N -0.25 -1.59 11.68 33.43 0.39 -1.20 16 27 C -0.15 0.21 7.20 -25.78 -0.19 0.03 16 28 H 0.04 -0.11 8.14 -51.93 -0.42 -0.54 16 29 H 0.04 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.09 0.20 8.00 -51.93 -0.42 -0.21 16 32 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 33 H 0.05 -0.04 8.08 -51.93 -0.42 -0.46 16 34 H 0.07 0.24 6.60 -51.93 -0.34 -0.10 16 35 H 0.38 -0.66 9.12 45.56 0.42 -0.25 16 36 H 0.40 -0.70 8.63 -40.82 -0.35 -1.06 16 37 H 0.12 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.13 -0.50 8.07 -51.93 -0.42 -0.92 16 39 H 0.18 -0.18 6.37 -52.49 -0.33 -0.52 16 40 H 0.07 0.03 5.36 -51.92 -0.28 -0.25 16 41 H 0.37 -0.48 8.74 45.56 0.40 -0.09 16 42 H -0.25 -0.48 7.02 56.52 0.40 -0.08 16 43 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 44 H 0.13 0.20 5.99 -52.49 -0.31 -0.11 16 45 H 0.13 -0.02 8.06 -52.48 -0.42 -0.45 16 46 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 47 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 48 H 0.12 0.55 8.06 -52.49 -0.42 0.13 16 49 H 0.11 -0.26 8.06 -51.93 -0.42 -0.67 16 50 H 0.08 -0.10 8.09 -51.93 -0.42 -0.52 16 LS Contribution 416.52 15.07 6.28 6.28 Total: 0.00 -12.33 416.52 -9.62 -21.95 By element: Atomic # 1 Polarization: -3.54 SS G_CDS: -6.31 Total: -9.86 kcal Atomic # 6 Polarization: -0.23 SS G_CDS: -3.10 Total: -3.33 kcal Atomic # 7 Polarization: -2.95 SS G_CDS: -0.04 Total: -2.99 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -1.21 Total: -6.64 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.24 Total: -5.41 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -12.33 -9.62 -21.95 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_12622748.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.585 kcal (2) G-P(sol) polarization free energy of solvation -12.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.947 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds