Wall clock time and date at job start Tue Mar 9 2021 12:55:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42904 * 113.99860 * 2 1 4 4 H 1.09000 * 112.90729 * 18.74965 * 3 2 1 5 5 C 1.53775 * 113.61411 * 149.99936 * 3 2 1 6 6 C 1.53785 * 87.17282 * 139.93934 * 5 3 2 7 7 C 1.53006 * 113.61186 * 89.15742 * 6 5 3 8 8 O 1.42902 * 109.46967 * 178.41084 * 7 6 5 9 9 N 1.46498 * 113.61494 * 220.06102 * 6 5 3 10 10 C 1.34777 * 120.00097 * 296.05228 * 9 6 5 11 11 O 1.21692 * 119.99740 * 5.03877 * 10 9 6 12 12 C 1.46683 * 119.99791 * 185.03679 * 10 9 6 13 13 C 1.37868 * 126.22966 * 180.02562 * 12 10 9 14 14 C 1.50697 * 126.45932 * 359.92058 * 13 12 10 15 15 C 1.39833 * 107.08374 * 179.97438 * 13 12 10 16 16 C 1.35454 * 107.86631 * 359.97438 * 15 13 12 17 17 C 1.50700 * 125.56529 * 180.02562 * 16 15 13 18 18 O 1.42897 * 109.46926 * 119.97591 * 17 16 15 19 19 Si 1.86298 * 109.47222 * 359.97438 * 17 16 15 20 20 N 1.35530 * 108.86915 * 359.77191 * 16 15 13 21 21 C 1.53781 * 113.61506 * 247.49863 * 3 2 1 22 22 H 1.09004 * 109.46645 * 180.02562 * 1 2 3 23 23 H 1.08994 * 109.47280 * 299.99798 * 1 2 3 24 24 H 1.08997 * 109.47421 * 59.99926 * 1 2 3 25 25 H 1.08995 * 113.61935 * 254.53080 * 5 3 2 26 26 H 1.09002 * 113.61665 * 25.35263 * 5 3 2 27 27 H 1.08994 * 109.47011 * 298.41175 * 7 6 5 28 28 H 1.08995 * 109.46803 * 58.41261 * 7 6 5 29 29 H 0.96694 * 114.00249 * 180.02562 * 8 7 6 30 30 H 0.97003 * 119.99655 * 116.05416 * 9 6 5 31 31 H 1.09000 * 109.47100 * 90.00356 * 14 13 12 32 32 H 1.09000 * 109.47147 * 210.00212 * 14 13 12 33 33 H 1.09002 * 109.47123 * 330.00541 * 14 13 12 34 34 H 1.08000 * 126.06872 * 179.97438 * 15 13 12 35 35 H 1.09002 * 109.47235 * 239.98121 * 17 16 15 36 36 H 0.96696 * 114.00594 * 299.99939 * 18 17 16 37 37 H 1.48501 * 110.00087 * 58.67974 * 19 17 16 38 38 H 1.48501 * 110.00062 * 180.02562 * 19 17 16 39 39 H 0.97003 * 125.67871 * 180.26485 * 20 16 15 40 40 H 1.09000 * 113.61498 * 334.56781 * 21 3 2 41 41 H 1.09004 * 113.61311 * 105.46907 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3227 5 6 3.3755 1.3720 0.7045 6 6 3.8252 2.3176 -0.4218 7 6 3.5460 3.7935 -0.1309 8 8 4.0300 4.5920 -1.2127 9 7 5.1959 2.0757 -0.8788 10 6 6.2304 2.2633 -0.0355 11 8 6.0220 2.5443 1.1300 12 6 7.6074 2.1287 -0.5227 13 6 8.7553 2.2911 0.2235 14 6 8.8297 2.6407 1.6875 15 6 9.8374 2.0715 -0.6344 16 6 9.3428 1.7846 -1.8623 17 6 10.1637 1.4798 -3.0888 18 8 9.8431 0.1706 -3.5633 19 14 11.9748 1.5584 -2.6591 20 7 7.9889 1.8108 -1.8065 21 6 2.7534 1.6490 -1.3018 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8899 24 1 -0.3634 0.5138 -0.8899 25 1 3.3384 1.8471 1.6847 26 1 3.9082 0.4211 0.7150 27 1 2.4725 3.9451 -0.0194 28 1 4.0517 4.0843 0.7898 29 1 3.8868 5.5411 -1.0958 30 1 5.3590 1.7806 -1.7883 31 1 8.8335 1.7257 2.2798 32 1 9.7436 3.2025 1.8809 33 1 7.9659 3.2468 1.9607 34 1 10.8823 2.1217 -0.3657 35 1 9.9425 2.2121 -3.8653 36 1 10.0150 -0.5330 -2.9228 37 1 12.2831 0.5870 -1.5790 38 1 12.7952 1.2603 -3.8604 39 1 7.3886 1.6366 -2.5483 40 1 3.1166 0.7741 -1.8410 41 1 2.2139 2.3478 -1.9412 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_13940406.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:23 Heat of formation + Delta-G solvation = -84.233028 kcal Electronic energy + Delta-G solvation = -24892.584094 eV Core-core repulsion = 21162.174891 eV Total energy + Delta-G solvation = -3730.409203 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.56146 -41.51658 -39.45126 -38.03961 -37.79774 -36.69498 -34.47288 -33.27105 -31.55105 -28.81655 -28.08605 -27.36847 -26.95489 -26.77135 -24.21397 -22.34199 -21.55519 -20.42020 -20.03056 -19.46043 -18.63390 -18.24093 -17.90667 -16.91369 -16.71074 -16.51088 -16.24130 -15.99541 -15.89778 -15.41489 -15.34127 -15.24764 -14.76986 -14.42800 -14.23871 -13.86128 -13.71221 -13.53573 -13.47726 -13.43514 -13.08755 -12.87832 -12.74872 -12.51203 -12.20670 -11.94307 -11.84626 -11.79211 -11.18968 -10.94866 -10.62713 -10.55564 -10.13052 -9.76222 -9.09282 -4.95729 0.44623 1.14400 1.60425 1.62989 1.85576 1.99872 2.21282 2.45217 2.80648 2.92653 3.18930 3.22343 3.48439 3.56129 3.64132 3.81856 3.91499 4.12843 4.21577 4.26045 4.28302 4.35037 4.39082 4.43478 4.54416 4.57081 4.67724 4.71304 4.79675 4.83794 4.90027 4.96976 4.98215 5.06795 5.26687 5.39782 5.52266 5.71485 5.96817 6.15670 6.23907 6.31903 6.53382 6.55824 7.24333 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.062 3.938 4 H 0.093 0.907 5 C -0.124 4.124 6 C 0.159 3.841 7 C 0.084 3.916 8 O -0.566 6.566 9 N -0.708 5.708 10 C 0.596 3.404 11 O -0.521 6.521 12 C -0.052 4.052 13 C -0.066 4.066 14 C -0.092 4.092 15 C -0.200 4.200 16 C 0.026 3.974 17 C -0.061 4.061 18 O -0.535 6.535 19 Si 0.717 3.283 20 N -0.523 5.523 21 C -0.152 4.152 22 H 0.088 0.912 23 H 0.044 0.956 24 H 0.043 0.957 25 H 0.085 0.915 26 H 0.100 0.900 27 H 0.057 0.943 28 H 0.065 0.935 29 H 0.383 0.617 30 H 0.396 0.604 31 H 0.067 0.933 32 H 0.065 0.935 33 H 0.081 0.919 34 H 0.150 0.850 35 H 0.120 0.880 36 H 0.380 0.620 37 H -0.255 1.255 38 H -0.256 1.256 39 H 0.416 0.584 40 H 0.098 0.902 41 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.492 2.507 -1.147 3.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.004 3.996 4 H 0.111 0.889 5 C -0.162 4.162 6 C 0.073 3.927 7 C 0.005 3.995 8 O -0.372 6.372 9 N -0.359 5.359 10 C 0.384 3.616 11 O -0.397 6.397 12 C -0.165 4.165 13 C -0.075 4.075 14 C -0.149 4.149 15 C -0.225 4.225 16 C -0.092 4.092 17 C -0.171 4.171 18 O -0.341 6.341 19 Si 0.616 3.384 20 N -0.120 5.120 21 C -0.190 4.190 22 H 0.106 0.894 23 H 0.063 0.937 24 H 0.062 0.938 25 H 0.104 0.896 26 H 0.118 0.882 27 H 0.075 0.925 28 H 0.083 0.917 29 H 0.230 0.770 30 H 0.230 0.770 31 H 0.086 0.914 32 H 0.084 0.916 33 H 0.100 0.900 34 H 0.167 0.833 35 H 0.138 0.862 36 H 0.228 0.772 37 H -0.179 1.179 38 H -0.181 1.181 39 H 0.254 0.746 40 H 0.117 0.883 41 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.942 1.836 -1.126 2.351 hybrid contribution -1.256 -0.529 -0.660 1.514 sum -2.198 1.307 -1.786 3.120 Atomic orbital electron populations 1.22846 0.80713 1.03170 1.00135 1.87967 1.20028 1.26639 1.94496 1.23591 0.94052 0.85919 0.96079 0.88925 1.23522 0.94427 0.99992 0.98309 1.21363 0.81137 0.93120 0.97102 1.22254 0.97854 0.89028 0.90353 1.86434 1.84429 1.21839 1.44490 1.45582 1.05267 1.69801 1.15235 1.16978 0.82530 0.76566 0.85502 1.90805 1.84464 1.48186 1.16281 1.20255 0.93952 1.17177 0.85144 1.19914 0.90196 1.00986 0.96372 1.20376 1.03074 1.01845 0.89596 1.20589 0.99219 1.10887 0.91767 1.21020 0.83217 1.07486 0.97496 1.24912 1.09959 0.86772 0.95419 1.86590 1.87525 1.15410 1.44581 0.94247 0.72407 0.91274 0.80474 1.41860 1.06754 1.53482 1.09860 1.23863 0.96315 1.01059 0.97730 0.89383 0.93739 0.93848 0.89592 0.88192 0.92511 0.91722 0.77008 0.77036 0.91386 0.91627 0.90048 0.83261 0.86234 0.77188 1.17891 1.18053 0.74610 0.88325 0.89876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.66 10.71 -35.23 -0.38 -1.04 16 3 C 0.06 0.00 3.96 -25.92 -0.10 -0.10 16 4 H 0.09 -0.15 7.41 -51.93 -0.38 -0.54 16 5 C -0.12 -0.14 6.33 -25.92 -0.16 -0.30 16 6 C 0.16 0.08 0.92 -130.91 -0.12 -0.04 16 7 C 0.08 0.01 6.19 37.16 0.23 0.24 16 8 O -0.57 -0.24 13.39 -35.23 -0.47 -0.71 16 9 N -0.71 -0.61 4.97 -48.06 -0.24 -0.85 16 10 C 0.60 1.89 7.45 -12.85 -0.10 1.79 16 11 O -0.52 -2.88 13.36 5.20 0.07 -2.81 16 12 C -0.05 -0.13 7.05 -81.98 -0.58 -0.71 16 13 C -0.07 -0.17 6.21 -104.16 -0.65 -0.82 16 14 C -0.09 -0.19 9.83 36.00 0.35 0.16 16 15 C -0.20 -0.18 9.27 -39.98 -0.37 -0.55 16 16 C 0.03 0.01 6.47 -81.95 -0.53 -0.53 16 17 C -0.06 0.06 3.08 36.01 0.11 0.17 16 18 O -0.53 -0.09 12.88 -35.23 -0.45 -0.54 16 19 Si 0.72 -1.19 30.54 -169.99 -5.19 -6.38 16 20 N -0.52 -0.14 5.99 -5.70 -0.03 -0.18 16 21 C -0.15 0.08 7.19 -25.83 -0.19 -0.11 16 22 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 23 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 24 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 25 H 0.09 0.11 8.10 -51.93 -0.42 -0.31 16 26 H 0.10 0.25 8.14 -51.93 -0.42 -0.18 16 27 H 0.06 -0.10 7.36 -51.93 -0.38 -0.49 16 28 H 0.06 0.09 7.47 -51.93 -0.39 -0.30 16 29 H 0.38 -1.26 9.12 45.56 0.42 -0.85 16 30 H 0.40 -0.38 7.85 -40.82 -0.32 -0.70 16 31 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 32 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.08 0.29 6.49 -51.93 -0.34 -0.05 16 34 H 0.15 -0.16 6.17 -52.49 -0.32 -0.48 16 35 H 0.12 -0.23 7.96 -51.93 -0.41 -0.65 16 36 H 0.38 -0.84 8.70 45.56 0.40 -0.45 16 37 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 38 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 39 H 0.42 -0.71 8.20 -40.82 -0.33 -1.05 16 40 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 LS Contribution 340.80 15.07 5.14 5.14 Total: 0.00 -8.36 340.80 -7.64 -16.00 By element: Atomic # 1 Polarization: -3.84 SS G_CDS: -5.07 Total: -8.91 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -1.00 Total: 0.28 kcal Atomic # 7 Polarization: -0.75 SS G_CDS: -0.27 Total: -1.03 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -1.23 Total: -5.11 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.19 Total: -6.38 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -8.36 -7.64 -16.00 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_13940406.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.232 kcal (2) G-P(sol) polarization free energy of solvation -8.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.001 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds