Wall clock time and date at job start Tue Mar 9 2021 12:56:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42900 * 114.00128 * 2 1 4 4 H 1.09006 * 112.90603 * 18.75471 * 3 2 1 5 5 C 1.53779 * 113.61631 * 149.99830 * 3 2 1 6 6 C 1.53784 * 87.07927 * 89.12002 * 5 3 2 7 7 C 1.52995 * 113.61417 * 140.06782 * 6 5 3 8 8 O 1.42905 * 109.47210 * 186.55698 * 7 6 5 9 9 N 1.46495 * 113.61520 * 270.88714 * 6 5 3 10 10 C 1.34774 * 120.00321 * 304.26311 * 9 6 5 11 11 O 1.21283 * 119.99844 * 354.63485 * 10 9 6 12 12 C 1.50701 * 120.00210 * 174.90766 * 10 9 6 13 13 O 1.42901 * 109.47025 * 179.72732 * 12 10 9 14 14 C 1.35903 * 117.00156 * 180.02562 * 13 12 10 15 15 C 1.38714 * 120.05813 * 179.72380 * 14 13 12 16 16 N 1.47998 * 120.02532 * 0.02562 * 15 14 13 17 17 O 1.21809 * 120.00035 * 180.02562 * 16 15 14 18 18 O 1.21800 * 120.00467 * 359.97438 * 16 15 14 19 19 C 1.38167 * 119.94160 * 179.74596 * 15 14 13 20 20 C 1.38238 * 120.05554 * 0.52670 * 19 15 14 21 21 C 1.50699 * 119.94512 * 179.76820 * 20 19 15 22 22 O 1.42903 * 109.47151 * 299.98012 * 21 20 19 23 23 Si 1.86297 * 109.47624 * 179.97438 * 21 20 19 24 24 C 1.38281 * 120.11462 * 359.74963 * 20 19 15 25 25 C 1.38130 * 120.05699 * 359.97296 * 24 20 19 26 26 C 1.53779 * 113.61968 * 247.49998 * 3 2 1 27 27 H 1.09003 * 109.46934 * 299.99569 * 1 2 3 28 28 H 1.09002 * 109.47169 * 59.99035 * 1 2 3 29 29 H 1.08998 * 109.47093 * 179.97438 * 1 2 3 30 30 H 1.09004 * 113.61249 * 334.57753 * 5 3 2 31 31 H 1.08995 * 113.69758 * 203.68248 * 5 3 2 32 32 H 1.09002 * 109.47389 * 306.55215 * 7 6 5 33 33 H 1.09002 * 109.47524 * 66.55694 * 7 6 5 34 34 H 0.96700 * 114.00157 * 180.02562 * 8 7 6 35 35 H 0.97008 * 120.00063 * 124.26577 * 9 6 5 36 36 H 1.09003 * 109.47053 * 299.72542 * 12 10 9 37 37 H 1.09000 * 109.47030 * 59.73026 * 12 10 9 38 38 H 1.08001 * 119.96559 * 180.27609 * 19 15 14 39 39 H 1.09007 * 109.47115 * 59.97607 * 21 20 19 40 40 H 0.96701 * 114.00176 * 300.00107 * 22 21 20 41 41 H 1.48495 * 110.00533 * 180.02562 * 23 21 20 42 42 H 1.48503 * 109.99561 * 301.31909 * 23 21 20 43 43 H 1.08001 * 119.97801 * 180.02562 * 24 20 19 44 44 H 1.08002 * 120.03007 * 180.02562 * 25 24 20 45 45 H 1.09004 * 113.61449 * 156.33453 * 26 3 2 46 46 H 1.08998 * 113.61141 * 25.43723 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0798 0.3228 5 6 3.3756 1.3719 0.7045 6 6 4.0062 1.0331 -0.6565 7 6 5.2920 1.8098 -0.9466 8 8 5.7171 1.5446 -2.2849 9 7 4.1437 -0.4053 -0.8979 10 6 4.8164 -1.1747 -0.0194 11 8 5.3905 -0.6637 0.9189 12 6 4.8606 -2.6694 -0.2064 13 8 5.6337 -3.2579 0.8415 14 6 5.7740 -4.6095 0.8205 15 6 6.5163 -5.2464 1.8041 16 7 7.1562 -4.4546 2.8783 17 8 7.8083 -5.0143 3.7415 18 8 7.0315 -3.2432 2.8987 19 6 6.6530 -6.6211 1.7833 20 6 6.0598 -7.3608 0.7772 21 6 6.2149 -8.8596 0.7540 22 8 7.6010 -9.1936 0.6572 23 14 5.3043 -9.5556 -0.7147 24 6 5.3241 -6.7277 -0.2077 25 6 5.1796 -5.3541 -0.1883 26 6 2.7535 1.6490 -1.3017 27 1 -0.3633 0.5138 0.8901 28 1 -0.3633 0.5140 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 3.5171 0.5956 1.4566 31 1 3.6323 2.3664 1.0693 32 1 5.1060 2.8774 -0.8294 33 1 6.0700 1.4978 -0.2497 34 1 6.5289 2.0049 -2.5382 35 1 3.7505 -0.8040 -1.6900 36 1 3.8469 -3.0692 -0.1785 37 1 5.3166 -2.9019 -1.1687 38 1 7.2272 -7.1178 2.5514 39 1 5.8026 -9.2817 1.6706 40 1 8.0340 -8.8496 -0.1360 41 1 5.4490 -11.0331 -0.7486 42 1 3.8673 -9.1880 -0.6420 43 1 4.8612 -7.3077 -0.9924 44 1 4.6045 -4.8602 -0.9575 45 1 2.8389 2.7199 -1.4861 46 1 2.3926 1.0966 -2.1693 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_4549638.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:01 Heat of formation + Delta-G solvation = -116.942475 kcal Electronic energy + Delta-G solvation = -34530.763618 eV Core-core repulsion = 29586.437170 eV Total energy + Delta-G solvation = -4944.326449 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.144 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.97244 -41.95987 -41.46037 -40.05170 -39.11057 -37.93665 -37.47453 -37.07608 -36.57854 -34.17501 -33.43058 -32.32253 -30.12957 -28.74745 -27.55309 -27.45297 -26.94446 -26.65170 -24.32138 -23.43464 -22.75994 -21.83503 -20.53052 -20.21054 -19.40282 -19.13024 -18.53389 -18.29232 -18.27485 -18.16649 -17.78356 -17.46603 -17.09870 -16.89221 -16.68742 -16.46093 -16.23683 -16.15745 -15.74224 -15.70124 -15.37182 -14.96346 -14.85713 -14.69415 -14.06277 -13.96027 -13.87432 -13.76247 -13.40149 -13.34917 -13.22616 -12.83440 -12.48680 -12.38062 -12.30863 -12.15715 -12.08863 -11.99802 -11.80647 -11.69348 -11.60586 -11.09219 -10.88702 -10.73804 -10.67011 -10.59468 -9.99437 -9.84556 -5.27978 -1.08456 -0.32899 0.42591 0.58046 1.03929 1.16177 1.38594 1.57527 1.77452 1.98394 2.25713 2.57179 2.95372 3.03060 3.08932 3.25211 3.29686 3.38519 3.45182 3.51251 3.57944 3.66685 3.70890 3.75776 3.80925 4.00076 4.18892 4.20353 4.24371 4.33403 4.34475 4.34846 4.38399 4.48217 4.51525 4.57337 4.61137 4.69848 4.71970 4.73958 4.96550 4.97246 5.05050 5.46383 5.54457 5.76489 6.12519 6.35411 6.44154 6.61241 6.98298 7.19949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.366 6.366 3 C 0.062 3.938 4 H 0.081 0.919 5 C -0.139 4.139 6 C 0.167 3.833 7 C 0.073 3.927 8 O -0.570 6.570 9 N -0.688 5.688 10 C 0.522 3.478 11 O -0.500 6.500 12 C 0.032 3.968 13 O -0.253 6.253 14 C 0.201 3.799 15 C -0.076 4.076 16 N 0.029 4.971 17 O -0.179 6.179 18 O -0.118 6.118 19 C 0.009 3.991 20 C -0.159 4.159 21 C -0.065 4.065 22 O -0.536 6.536 23 Si 0.692 3.308 24 C -0.025 4.025 25 C -0.209 4.209 26 C -0.150 4.150 27 H 0.044 0.956 28 H 0.043 0.957 29 H 0.086 0.914 30 H 0.094 0.906 31 H 0.106 0.894 32 H 0.057 0.943 33 H 0.060 0.940 34 H 0.381 0.619 35 H 0.405 0.595 36 H 0.102 0.898 37 H 0.100 0.900 38 H 0.164 0.836 39 H 0.121 0.879 40 H 0.381 0.619 41 H -0.249 1.249 42 H -0.254 1.254 43 H 0.148 0.852 44 H 0.157 0.843 45 H 0.106 0.894 46 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.610 0.892 -9.587 11.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.284 6.284 3 C 0.003 3.997 4 H 0.099 0.901 5 C -0.177 4.177 6 C 0.080 3.920 7 C -0.006 4.006 8 O -0.375 6.375 9 N -0.341 5.341 10 C 0.306 3.694 11 O -0.373 6.373 12 C -0.047 4.047 13 O -0.162 6.162 14 C 0.151 3.849 15 C -0.161 4.161 16 N 0.549 4.451 17 O -0.387 6.387 18 O -0.342 6.342 19 C -0.010 4.010 20 C -0.160 4.160 21 C -0.176 4.176 22 O -0.341 6.341 23 Si 0.593 3.407 24 C -0.043 4.043 25 C -0.228 4.228 26 C -0.188 4.188 27 H 0.062 0.938 28 H 0.062 0.938 29 H 0.105 0.895 30 H 0.113 0.887 31 H 0.124 0.876 32 H 0.075 0.925 33 H 0.078 0.922 34 H 0.228 0.772 35 H 0.240 0.760 36 H 0.120 0.880 37 H 0.118 0.882 38 H 0.181 0.819 39 H 0.138 0.862 40 H 0.229 0.771 41 H -0.173 1.173 42 H -0.179 1.179 43 H 0.165 0.835 44 H 0.174 0.826 45 H 0.124 0.876 46 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -6.605 -0.396 -8.923 11.109 hybrid contribution 0.084 0.719 0.295 0.782 sum -6.521 0.324 -8.628 10.820 Atomic orbital electron populations 1.22844 0.80636 1.02967 1.00243 1.87886 1.19810 1.26197 1.94504 1.23099 0.94709 0.85683 0.96187 0.90126 1.23536 0.93274 1.04088 0.96769 1.21134 0.93283 0.80343 0.97246 1.22503 0.96185 0.97692 0.84186 1.86425 1.47261 1.73909 1.29915 1.45091 1.56433 1.06868 1.25721 1.19654 0.79325 0.87336 0.83118 1.90822 1.42009 1.74060 1.30433 1.22726 0.97476 0.93198 0.91259 1.86497 1.66865 1.15368 1.47429 1.18711 0.90720 0.83856 0.91573 1.20580 1.09171 0.92049 0.94296 1.43336 0.99355 1.01579 1.00841 1.94554 1.39000 1.73658 1.31502 1.94697 1.64067 0.94870 1.80520 1.20820 0.93631 0.89255 0.97288 1.20297 1.01980 0.97459 0.96313 1.25089 0.89594 0.91577 1.11309 1.86558 1.20846 1.78109 1.48602 0.94885 0.79889 0.81996 0.83916 1.21261 0.93013 0.93971 0.96023 1.21289 1.06219 0.94758 1.00562 1.23762 0.94519 1.02078 0.98392 0.93760 0.93826 0.89501 0.88707 0.87571 0.92511 0.92187 0.77219 0.76041 0.88031 0.88196 0.81859 0.86200 0.77132 1.17306 1.17919 0.83453 0.82585 0.87590 0.89879 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.85 101.05 1.10 1.04 16 2 O -0.37 -0.01 10.13 -35.23 -0.36 -0.37 16 3 C 0.06 -0.06 4.37 -25.92 -0.11 -0.18 16 4 H 0.08 -0.18 7.87 -51.93 -0.41 -0.59 16 5 C -0.14 -0.03 6.71 -25.92 -0.17 -0.21 16 6 C 0.17 -0.03 0.76 -131.01 -0.10 -0.13 16 7 C 0.07 0.00 6.42 37.15 0.24 0.24 16 8 O -0.57 0.06 13.54 -35.23 -0.48 -0.42 16 9 N -0.69 0.26 4.50 -46.86 -0.21 0.05 16 10 C 0.52 0.99 7.41 -10.99 -0.08 0.91 16 11 O -0.50 -3.20 14.42 -14.36 -0.21 -3.41 16 12 C 0.03 -0.03 5.22 36.01 0.19 0.15 16 13 O -0.25 -0.76 7.68 -49.79 -0.38 -1.14 16 14 C 0.20 0.28 6.67 -39.22 -0.26 0.02 16 15 C -0.08 -0.25 6.87 -79.81 -0.55 -0.80 16 16 N 0.03 0.20 4.45 34.03 0.15 0.35 16 17 O -0.18 -1.37 18.45 -29.46 -0.54 -1.91 16 18 O -0.12 -1.06 17.24 -36.49 -0.63 -1.69 16 19 C 0.01 0.01 9.11 -39.61 -0.36 -0.35 16 20 C -0.16 0.26 5.39 -104.61 -0.56 -0.30 16 21 C -0.07 0.14 2.82 36.00 0.10 0.24 16 22 O -0.54 0.70 12.77 -35.23 -0.45 0.25 16 23 Si 0.69 -2.38 29.78 -169.99 -5.06 -7.45 16 24 C -0.02 0.08 8.66 -39.61 -0.34 -0.26 16 25 C -0.21 0.54 9.04 -39.43 -0.36 0.18 16 26 C -0.15 0.28 7.23 -25.92 -0.19 0.09 16 27 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.04 -0.12 8.14 -51.93 -0.42 -0.55 16 29 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 30 H 0.09 0.30 6.72 -51.93 -0.35 -0.05 16 31 H 0.11 -0.15 8.10 -51.93 -0.42 -0.57 16 32 H 0.06 -0.10 8.09 -51.93 -0.42 -0.52 16 33 H 0.06 0.12 7.52 -51.93 -0.39 -0.27 16 34 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 35 H 0.40 -1.07 8.75 -40.82 -0.36 -1.42 16 36 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 37 H 0.10 -0.42 7.66 -51.93 -0.40 -0.82 16 38 H 0.16 0.16 7.61 -52.49 -0.40 -0.24 16 39 H 0.12 -0.21 7.96 -51.92 -0.41 -0.62 16 40 H 0.38 -2.01 8.70 45.56 0.40 -1.62 16 41 H -0.25 -0.07 7.11 56.52 0.40 0.34 16 42 H -0.25 0.41 7.11 56.52 0.40 0.81 16 43 H 0.15 -0.89 4.88 -52.49 -0.26 -1.15 16 44 H 0.16 -0.92 6.30 -52.49 -0.33 -1.25 16 45 H 0.11 -0.32 8.06 -51.93 -0.42 -0.74 16 46 H 0.08 -0.16 8.13 -51.93 -0.42 -0.58 16 LS Contribution 392.26 15.07 5.91 5.91 Total: 0.00 -13.17 392.26 -8.76 -21.93 By element: Atomic # 1 Polarization: -7.71 SS G_CDS: -5.04 Total: -12.74 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -1.46 Total: 0.64 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.06 Total: 0.40 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -3.05 Total: -8.69 kcal Atomic # 14 Polarization: -2.38 SS G_CDS: -5.06 Total: -7.45 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -13.17 -8.76 -21.93 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_4549638.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.016 kcal (2) G-P(sol) polarization free energy of solvation -13.169 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.926 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds